Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21o06
         (579 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    27   0.58 
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    23   5.4  
AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    23   5.4  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           23   5.4  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    23   5.4  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    23   9.5  

>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 26.6 bits (56), Expect = 0.58
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +1

Query: 442  MRLRHILCWPFVKMKLRNIQHIVAANMPLNF 534
            +R  HIL W  +K  L N+Q+++  N P NF
Sbjct: 2665 IRYPHILHWREMKALLTNVQNLI-VNEPGNF 2694


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 23.4 bits (48), Expect = 5.4
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 45  VDHYFKSLRRITMTSLNEQIEHPS 116
           +D   K L R+ +  LNE +E PS
Sbjct: 556 LDALGKVLERLILNRLNEHLEEPS 579


>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 23.4 bits (48), Expect = 5.4
 Identities = 8/28 (28%), Positives = 19/28 (67%)
 Frame = +3

Query: 285 IDYYSNLVRKKVRRVQMNQQRLVSTQER 368
           I +++ ++ ++VRR    +QRL  +++R
Sbjct: 278 ISFFNLMIYRQVRRANKERQRLSRSEKR 305


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 23.4 bits (48), Expect = 5.4
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
 Frame = +3

Query: 27  NALNFFVDHYFKSLRRITMTSLNEQI---EHPSFFWNCLALQD 146
           N L +   +    L  +++ SL+       HP  F NC +LQD
Sbjct: 426 NKLKYLDAYSLNGLYALSLLSLDNNALTGVHPEAFRNCSSLQD 468


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 23.4 bits (48), Expect = 5.4
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = +2

Query: 116 IFLELPRPPRRLSILFIDRSKTLLLRCGTDLHIRRIF-RNNPG 241
           + LEL RPP        D SK + +     L ++RI+  N PG
Sbjct: 35  LLLELYRPPANNGRWAFDCSKKVAIVATGSLPLQRIWCSNTPG 77


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 11/46 (23%), Positives = 23/46 (50%)
 Frame = +3

Query: 279 QKIDYYSNLVRKKVRRVQMNQQRLVSTQERTEKQLKRSRQSTGIIT 416
           Q+I    N ++++   ++   QRL +  ++ E +LKR       +T
Sbjct: 780 QEIQTQINYLQEQQGELEATIQRLTAKLKQQEMELKRMHMDVASLT 825


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 614,972
Number of Sequences: 2352
Number of extensions: 12262
Number of successful extensions: 23
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55086417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)