Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21n24
         (424 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC054338-1|AAH54338.1|  985|Homo sapiens transmembrane protein 6...    29   8.5  
BC032835-1|AAH32835.1|  985|Homo sapiens TMEM67 protein protein.       29   8.5  

>BC054338-1|AAH54338.1|  985|Homo sapiens transmembrane protein 67
           protein.
          Length = 985

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +3

Query: 33  FIFKHCCFRYYSNFISIHTYPKKSSLIMDKGQEQVKKPFCA-RCFLPVDSEDTIEIA 200
           F+  H CF YY +  S+H +   +   M+   ++  +  C+ R  +P     T EIA
Sbjct: 768 FLLSHKCFGYYIHGRSVHGHADTNMEEMNMNLKREAENLCSQRGLVPNTDGQTFEIA 824


>BC032835-1|AAH32835.1|  985|Homo sapiens TMEM67 protein protein.
          Length = 985

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +3

Query: 33  FIFKHCCFRYYSNFISIHTYPKKSSLIMDKGQEQVKKPFCA-RCFLPVDSEDTIEIA 200
           F+  H CF YY +  S+H +   +   M+   ++  +  C+ R  +P     T EIA
Sbjct: 768 FLLSHKCFGYYIHGRSVHGHADTNMEEMNMNLKREAENLCSQRGLVPNTDGQTFEIA 824


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,163,619
Number of Sequences: 237096
Number of extensions: 1194070
Number of successful extensions: 2536
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2483
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2536
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3259265358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)