Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21n24
         (424 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039053-17|AAC25882.2|  279|Caenorhabditis elegans Serpentine r...    29   1.4  
AC006617-5|AAF39775.1|  325|Caenorhabditis elegans Serpentine re...    28   3.2  
Z78418-4|CAB01698.1|  710|Caenorhabditis elegans Hypothetical pr...    27   5.5  
AC006709-1|AAF60432.2|  256|Caenorhabditis elegans Hypothetical ...    27   5.5  
Z49072-3|CAA88881.2|  331|Caenorhabditis elegans Hypothetical pr...    27   7.3  
AC024838-8|AAF60822.1|  234|Caenorhabditis elegans Thaumatin fam...    27   7.3  
Z81526-4|CAB04267.2|  430|Caenorhabditis elegans Hypothetical pr...    26   9.7  
U61944-5|AAB03121.2|  482|Caenorhabditis elegans Hypothetical pr...    26   9.7  
AL117203-12|CAB60423.1|  487|Caenorhabditis elegans Hypothetical...    26   9.7  

>AF039053-17|AAC25882.2|  279|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 16 protein.
          Length = 279

 Score = 29.1 bits (62), Expect = 1.4
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +2

Query: 20  NEIFFHFQTLLFSLLFKFYF 79
           N I FHF  +LF+ LFK +F
Sbjct: 218 NVIIFHFSPILFAFLFKHWF 237


>AC006617-5|AAF39775.1|  325|Caenorhabditis elegans Serpentine
           receptor, class d (delta)protein 65 protein.
          Length = 325

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 13/43 (30%), Positives = 19/43 (44%)
 Frame = +3

Query: 270 FYGHVFCNGCFKQHVLDRFRGECPSVHTNWAQWTCGKFGNGQE 398
           F G  FC  C+K +          ++HT + +  C K  N QE
Sbjct: 83  FLGPTFCATCYKAYATSVLTVNLINLHTLYYRTVCLKLINAQE 125


>Z78418-4|CAB01698.1|  710|Caenorhabditis elegans Hypothetical
           protein F25D7.5 protein.
          Length = 710

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +1

Query: 1   DFQKPSKRNIFSFSNIAVFVTIQILFQ 81
           DF+K SK + F F N+++    Q  F+
Sbjct: 284 DFRKKSKISFFFFGNVSILKNFQFFFR 310


>AC006709-1|AAF60432.2|  256|Caenorhabditis elegans Hypothetical
           protein Y119C1A.1 protein.
          Length = 256

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
 Frame = -2

Query: 402 PPPDHFQTFHKSTGPSLCGQMDIRL*TDLARAA*SIHCRIRARRTSSPPTEL-FCRRNTC 226
           PPP    +   STGP +C +      ++  R     HC++ +RR    P+E+ FC    C
Sbjct: 195 PPPPRSISQENSTGPWICDRCSRENNSNSYRCH---HCQLPSRRFD--PSEIDFCGCEYC 249

Query: 225 S 223
           S
Sbjct: 250 S 250


>Z49072-3|CAA88881.2|  331|Caenorhabditis elegans Hypothetical
           protein T24A11.2 protein.
          Length = 331

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 14/35 (40%), Positives = 16/35 (45%)
 Frame = +3

Query: 252 PSAVKMFYGHVFCNGCFKQHVLDRFRGECPSVHTN 356
           PSAV M +   F NG F  H   RF    P +  N
Sbjct: 129 PSAVGMIFSMAFYNGAFDVHEKMRFVPNYPFLMLN 163


>AC024838-8|AAF60822.1|  234|Caenorhabditis elegans Thaumatin family
           protein 6 protein.
          Length = 234

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 297 CFKQHVLDRFRGECPSVHT 353
           CF+ HV   F+  CPS ++
Sbjct: 193 CFRSHVAQTFKDACPSAYS 211


>Z81526-4|CAB04267.2|  430|Caenorhabditis elegans Hypothetical
           protein F33H2.7 protein.
          Length = 430

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 132 QVKKPFCARCFLPVDSEDTIEI 197
           Q  + +CA CFL +DS    EI
Sbjct: 17  QFSELYCATCFLEIDSSQETEI 38


>U61944-5|AAB03121.2|  482|Caenorhabditis elegans Hypothetical
           protein T12E12.1 protein.
          Length = 482

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +3

Query: 276 GHVFCNGCFKQHVLDR 323
           GH FC  C+K HV  R
Sbjct: 146 GHCFCEHCWKSHVESR 161


>AL117203-12|CAB60423.1|  487|Caenorhabditis elegans Hypothetical
           protein Y48C3A.20 protein.
          Length = 487

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = +3

Query: 75  ISIHTYPKKSSLIMDKGQEQVKKPFCARCFLPVDSEDTIEIAGQS 209
           +S+   P+  S  +  G+E  +K +CA C+  +   D+   A QS
Sbjct: 319 VSLTRVPRDVSEKLCVGEEDKRKQYCAYCYSILPISDSQFTAAQS 363


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,947,461
Number of Sequences: 27780
Number of extensions: 197595
Number of successful extensions: 600
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 600
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 692685370
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)