Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21n12
         (602 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC053845-1|AAH53845.1|  598|Homo sapiens HKR1 protein protein.         32   1.4  
BC017256-1|AAH17256.1|  659|Homo sapiens GLI-Kruppel family memb...    32   1.4  
BC004513-1|AAH04513.2|  422|Homo sapiens HKR1 protein protein.         32   1.4  
AK223616-1|BAD97336.1|  730|Homo sapiens Krueppel-related zinc f...    32   1.4  
AB013897-1|BAA86058.1|  697|Homo sapiens HKR1 protein.                 32   1.4  
BT007316-1|AAP35980.1|  570|Homo sapiens zinc finger protein 76 ...    26   6.9  
BC002549-1|AAH02549.1|  570|Homo sapiens zinc finger protein 76 ...    26   6.9  
BC000133-1|AAH00133.1|  570|Homo sapiens zinc finger protein 76 ...    26   6.9  
Z97832-3|CAI20189.1|  544|Homo sapiens zinc finger protein 76 (e...    26   7.0  
M91592-1|AAA98739.1|  515|Homo sapiens zinc-finger protein protein.    26   7.0  

>BC053845-1|AAH53845.1|  598|Homo sapiens HKR1 protein protein.
          Length = 598

 Score = 32.3 bits (70), Expect = 1.4
 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +2

Query: 218 VHHLKTHLGEQPMASTENIYNFMIIHDLKI-IATSMGFIQYVCLLIG 355
           + HL+TH GE+P   TE   +F    +LK    T  G   YVCL  G
Sbjct: 368 IRHLRTHTGEKPYVCTECGRHFSWKSNLKTHQRTHSGVKPYVCLECG 414


>BC017256-1|AAH17256.1|  659|Homo sapiens GLI-Kruppel family member
           HKR1 protein.
          Length = 659

 Score = 32.3 bits (70), Expect = 1.4
 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +2

Query: 218 VHHLKTHLGEQPMASTENIYNFMIIHDLKI-IATSMGFIQYVCLLIG 355
           + HL+TH GE+P   TE   +F    +LK    T  G   YVCL  G
Sbjct: 429 IRHLRTHTGEKPYVCTECGRHFSWKSNLKTHQRTHSGVKPYVCLECG 475


>BC004513-1|AAH04513.2|  422|Homo sapiens HKR1 protein protein.
          Length = 422

 Score = 32.3 bits (70), Expect = 1.4
 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +2

Query: 218 VHHLKTHLGEQPMASTENIYNFMIIHDLKI-IATSMGFIQYVCLLIG 355
           + HL+TH GE+P   TE   +F    +LK    T  G   YVCL  G
Sbjct: 192 IRHLRTHTGEKPYVCTECGRHFSWKSNLKTHQRTHSGVKPYVCLECG 238


>AK223616-1|BAD97336.1|  730|Homo sapiens Krueppel-related zinc
           finger protein 1 (HKR1 protein) variant protein.
          Length = 730

 Score = 32.3 bits (70), Expect = 1.4
 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +2

Query: 218 VHHLKTHLGEQPMASTENIYNFMIIHDLKI-IATSMGFIQYVCLLIG 355
           + HL+TH GE+P   TE   +F    +LK    T  G   YVCL  G
Sbjct: 465 IRHLRTHTGEKPYVCTECGRHFSWKSNLKTHQRTHSGVKPYVCLECG 511


>AB013897-1|BAA86058.1|  697|Homo sapiens HKR1 protein.
          Length = 697

 Score = 32.3 bits (70), Expect = 1.4
 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +2

Query: 218 VHHLKTHLGEQPMASTENIYNFMIIHDLKI-IATSMGFIQYVCLLIG 355
           + HL+TH GE+P   TE   +F    +LK    T  G   YVCL  G
Sbjct: 467 IRHLRTHTGEKPYVCTECGRHFSWKSNLKTHQRTHSGVKPYVCLECG 513


>BT007316-1|AAP35980.1|  570|Homo sapiens zinc finger protein 76
           (expressed in testis) protein.
          Length = 570

 Score = 26.2 bits (55), Expect(2) = 6.9
 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
 Frame = +2

Query: 224 HLKTHLGEQPMASTENIYN--FMIIHDL-KIIATSMGFIQYVCLLIGC 358
           H++TH GE+P    E + +  F    DL K + T  G   + C   GC
Sbjct: 215 HVRTHTGEKPYKCPEELCSKAFKTSGDLQKHVRTHTGERPFQCPFEGC 262



 Score = 22.2 bits (45), Expect(2) = 6.9
 Identities = 9/21 (42%), Positives = 12/21 (57%), Gaps = 1/21 (4%)
 Frame = +2

Query: 179 YTCFYGTVG-LFISVHHLKTH 238
           + C Y   G L+ + HHLK H
Sbjct: 165 FRCGYKGCGRLYTTAHHLKVH 185


>BC002549-1|AAH02549.1|  570|Homo sapiens zinc finger protein 76
           (expressed in testis) protein.
          Length = 570

 Score = 26.2 bits (55), Expect(2) = 6.9
 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
 Frame = +2

Query: 224 HLKTHLGEQPMASTENIYN--FMIIHDL-KIIATSMGFIQYVCLLIGC 358
           H++TH GE+P    E + +  F    DL K + T  G   + C   GC
Sbjct: 215 HVRTHTGEKPYKCPEELCSKAFKTSGDLQKHVRTHTGERPFQCPFEGC 262



 Score = 22.2 bits (45), Expect(2) = 6.9
 Identities = 9/21 (42%), Positives = 12/21 (57%), Gaps = 1/21 (4%)
 Frame = +2

Query: 179 YTCFYGTVG-LFISVHHLKTH 238
           + C Y   G L+ + HHLK H
Sbjct: 165 FRCGYKGCGRLYTTAHHLKVH 185


>BC000133-1|AAH00133.1|  570|Homo sapiens zinc finger protein 76
           (expressed in testis) protein.
          Length = 570

 Score = 26.2 bits (55), Expect(2) = 6.9
 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
 Frame = +2

Query: 224 HLKTHLGEQPMASTENIYN--FMIIHDL-KIIATSMGFIQYVCLLIGC 358
           H++TH GE+P    E + +  F    DL K + T  G   + C   GC
Sbjct: 215 HVRTHTGEKPYKCPEELCSKAFKTSGDLQKHVRTHTGERPFQCPFEGC 262



 Score = 22.2 bits (45), Expect(2) = 6.9
 Identities = 9/21 (42%), Positives = 12/21 (57%), Gaps = 1/21 (4%)
 Frame = +2

Query: 179 YTCFYGTVG-LFISVHHLKTH 238
           + C Y   G L+ + HHLK H
Sbjct: 165 FRCGYKGCGRLYTTAHHLKVH 185


>Z97832-3|CAI20189.1|  544|Homo sapiens zinc finger protein 76
           (expressed in testis) protein.
          Length = 544

 Score = 26.2 bits (55), Expect(2) = 7.0
 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
 Frame = +2

Query: 224 HLKTHLGEQPMASTENIYN--FMIIHDL-KIIATSMGFIQYVCLLIGC 358
           H++TH GE+P    E + +  F    DL K + T  G   + C   GC
Sbjct: 189 HVRTHTGEKPYKCPEELCSKAFKTSGDLQKHVRTHTGERPFQCPFEGC 236



 Score = 22.2 bits (45), Expect(2) = 7.0
 Identities = 9/21 (42%), Positives = 12/21 (57%), Gaps = 1/21 (4%)
 Frame = +2

Query: 179 YTCFYGTVG-LFISVHHLKTH 238
           + C Y   G L+ + HHLK H
Sbjct: 139 FRCGYKGCGRLYTTAHHLKVH 159


>M91592-1|AAA98739.1|  515|Homo sapiens zinc-finger protein protein.
          Length = 515

 Score = 26.2 bits (55), Expect(2) = 7.0
 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
 Frame = +2

Query: 224 HLKTHLGEQPMASTENIYN--FMIIHDL-KIIATSMGFIQYVCLLIGC 358
           H++TH GE+P    E + +  F    DL K + T  G   + C   GC
Sbjct: 215 HVRTHTGEKPYKCPEELCSKAFKTSGDLQKHVRTHTGERPFQCPFEGC 262



 Score = 22.2 bits (45), Expect(2) = 7.0
 Identities = 9/21 (42%), Positives = 12/21 (57%), Gaps = 1/21 (4%)
 Frame = +2

Query: 179 YTCFYGTVG-LFISVHHLKTH 238
           + C Y   G L+ + HHLK H
Sbjct: 165 FRCGYKGCGRLYTTAHHLKVH 185


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,193,510
Number of Sequences: 237096
Number of extensions: 1366135
Number of successful extensions: 5911
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4452
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5864
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6354183230
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)