Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21n09
         (601 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U70849-5|AAF99922.2|  400|Caenorhabditis elegans Phosphatidylser...   149   1e-36
U70849-6|ABD63227.1|  284|Caenorhabditis elegans Phosphatidylser...    79   2e-15
Z81461-8|CAB03839.1|  442|Caenorhabditis elegans Hypothetical pr...    31   0.83 
Z93389-10|CAB07674.1|  417|Caenorhabditis elegans Hypothetical p...    29   3.3  
Z93379-11|CAB07595.1|  417|Caenorhabditis elegans Hypothetical p...    29   3.3  
AL117207-12|CAD88220.1|  324|Caenorhabditis elegans Hypothetical...    29   3.3  
Z70782-8|CAA94845.2|  536|Caenorhabditis elegans Hypothetical pr...    28   5.9  

>U70849-5|AAF99922.2|  400|Caenorhabditis elegans Phosphatidylserine
           receptor familyprotein 1, isoform a protein.
          Length = 400

 Score =  149 bits (362), Expect = 1e-36
 Identities = 73/149 (48%), Positives = 91/149 (61%)
 Frame = +2

Query: 155 PELVDKHQWTILKYHNNFTEFLQCKDNVDRISAIQVTPXXXXXXXXXXXXPVVITDVQTN 334
           PEL  K  W  L Y  +F      +D++ R+    +T             PV+IT +  N
Sbjct: 26  PEL-RKFGWETLGYSESFN-LPPFRDSIQRVDGNNLTVEEFRRDFERPRIPVIITGLTDN 83

Query: 335 WKANYKWTLDRLVKKYRNQKFKCGEDNDGYSVKMKMKYYVEYMRTTIDDSPLYIFDSSFG 514
           W A  KWT++RL KKYRNQ FKCGED++G SV+MKMKYY +YM    DDSPLYIFDSSF 
Sbjct: 84  WAAKDKWTVERLSKKYRNQNFKCGEDDNGNSVRMKMKYYHDYMLNNKDDSPLYIFDSSFA 143

Query: 515 EHPRRKKLLEDYDVPLYFRDDLFKYCGEE 601
           E  + KKL EDY VP +F DDLF Y  ++
Sbjct: 144 ERRKTKKLSEDYSVPKFFEDDLFHYADDK 172


>U70849-6|ABD63227.1|  284|Caenorhabditis elegans Phosphatidylserine
           receptor familyprotein 1, isoform b protein.
          Length = 284

 Score = 79.0 bits (186), Expect = 2e-15
 Identities = 35/56 (62%), Positives = 40/56 (71%)
 Frame = +2

Query: 434 MKMKYYVEYMRTTIDDSPLYIFDSSFGEHPRRKKLLEDYDVPLYFRDDLFKYCGEE 601
           MKMKYY +YM    DDSPLYIFDSSF E  + KKL EDY VP +F DDLF Y  ++
Sbjct: 1   MKMKYYHDYMLNNKDDSPLYIFDSSFAERRKTKKLSEDYSVPKFFEDDLFHYADDK 56


>Z81461-8|CAB03839.1|  442|Caenorhabditis elegans Hypothetical
           protein C04F12.10 protein.
          Length = 442

 Score = 30.7 bits (66), Expect = 0.83
 Identities = 12/50 (24%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
 Frame = -1

Query: 523 WVLPKTAIKNIQWTIINGGSHIFYIILHFHLNTIAIIVFTTL-EFLIPIF 377
           + L    +  I+W I+NGG + F++ +   ++ + +++ T    F+ P+F
Sbjct: 151 FALTMPIVYGIEWIIVNGGPY-FFVYIWLFVSVVVLLLMTIYPTFIAPLF 199


>Z93389-10|CAB07674.1|  417|Caenorhabditis elegans Hypothetical
           protein F21H7.10 protein.
          Length = 417

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = -1

Query: 337 PVSLHISYDYRFIYFLIFLNEFFRCDLNSTNSVNIVLA 224
           P+S+ I  DY     L +L E  RCD++    +N+  A
Sbjct: 116 PISIGIFVDYHSYNVLEYLAEVHRCDVSFRRKMNVHFA 153


>Z93379-11|CAB07595.1|  417|Caenorhabditis elegans Hypothetical
           protein F21H7.10 protein.
          Length = 417

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = -1

Query: 337 PVSLHISYDYRFIYFLIFLNEFFRCDLNSTNSVNIVLA 224
           P+S+ I  DY     L +L E  RCD++    +N+  A
Sbjct: 116 PISIGIFVDYHSYNVLEYLAEVHRCDVSFRRKMNVHFA 153


>AL117207-12|CAD88220.1|  324|Caenorhabditis elegans Hypothetical
           protein Y60A3A.22 protein.
          Length = 324

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 19/97 (19%), Positives = 43/97 (44%), Gaps = 2/97 (2%)
 Frame = -1

Query: 469 GSHIFYIILHFHLNTIAIIVFTTLEFLIPIF--FNKSV*SPLVICFPVSLHISYDYRFIY 296
           G+  +Y++L   + ++A I  TTL  ++P++  F  S    L +   VS H       ++
Sbjct: 42  GAFRYYLMLFQVVCSLADITITTLSSIVPLYPLFAISSYGILALWLDVSAHYCLINVGVW 101

Query: 295 FLIFLNEFFRCDLNSTNSVNIVLALEELSKVVVVF*Y 185
             + +     C      ++ +++ +  + K +  F Y
Sbjct: 102 AYLEMESLLLCFFKKHQTIAVIIDVHVIPKFIPYFCY 138


>Z70782-8|CAA94845.2|  536|Caenorhabditis elegans Hypothetical
           protein R04B5.9 protein.
          Length = 536

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -1

Query: 502 IKNIQWTIINGGSHIFYIILHFHLNTIAIIVFTTLEFLIPIFF 374
           IK  +W I NGG H     L      ++II +  L+ ++P FF
Sbjct: 465 IKTTEWVIQNGGVH----ELLTEGRDLSIIKYYNLDIIVPCFF 503


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,184,766
Number of Sequences: 27780
Number of extensions: 232902
Number of successful extensions: 634
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 634
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)