Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21n05
         (683 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    25   0.51 
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    25   0.51 
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            23   3.6  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   6.3  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    22   6.3  

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 25.4 bits (53), Expect = 0.51
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -1

Query: 548 MWRKPEVQLYTRVFLFNVTNSE 483
           +WR P +Q  T  +LFN+  S+
Sbjct: 58  IWRNPSMQTPTNYYLFNLAVSD 79


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 25.4 bits (53), Expect = 0.51
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +2

Query: 95  INEPKINIKYEIQRKFKKQLISD 163
           + EP I+I  EI +  K+QLIS+
Sbjct: 1   MKEPMIDITMEISKNHKEQLISN 23


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = +1

Query: 382 DNNYLWPA*HINICDVICPVKKRWNKFIGFARY 480
           + N L P+ H NIC      + RW +     R+
Sbjct: 361 NGNILSPSIHDNICSNGWICEHRWRQIYNMVRF 393



 Score = 22.2 bits (45), Expect = 4.7
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -2

Query: 541 GNLKSSFIRGSFCST*LILKSTWRTR*IYSTVSSQDIL 428
           GN+ S  I  + CS   I +  WR   IY+ V  ++++
Sbjct: 362 GNILSPSIHDNICSNGWICEHRWRQ--IYNMVRFRNLV 397


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -2

Query: 400 ATNNYYQSFYSKY 362
           A  NYY + Y+KY
Sbjct: 713 AVRNYYANLYTKY 725


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -3

Query: 603 TMFLSTESPSAGWGRNLRDV 544
           T+++S E  SA  G N++DV
Sbjct: 101 TVYVSNEPSSAITGNNVKDV 120


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,227
Number of Sequences: 438
Number of extensions: 3991
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)