Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21n03
         (615 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052146-1|AAK93570.1| 1728|Drosophila melanogaster SD10541p pro...    31   1.6  
AF093637-1|AAC72365.1| 1750|Drosophila melanogaster SET domain b...    31   1.6  
AE014297-1382|AAF54700.3| 1993|Drosophila melanogaster CG6939-PA...    31   1.6  
AE014297-1381|AAN13531.2| 1973|Drosophila melanogaster CG6939-PB...    31   1.6  
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    29   6.6  
AE014297-1042|AAF54451.1|  334|Drosophila melanogaster CG12947-P...    28   8.7  

>AY052146-1|AAK93570.1| 1728|Drosophila melanogaster SD10541p
           protein.
          Length = 1728

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 18/45 (40%), Positives = 20/45 (44%), Gaps = 5/45 (11%)
 Frame = -3

Query: 331 PLVQKPLQQTCCLL-----ITRHSECFLQGSGNRSSHPLLVRTAG 212
           P VQKP  QT CLL     +T H  CFL   G       L+   G
Sbjct: 652 PHVQKPKIQTPCLLPGEDLVTDHLRCFLMPDGREDETQCLIPAEG 696


>AF093637-1|AAC72365.1| 1750|Drosophila melanogaster SET domain
           binding factor protein.
          Length = 1750

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 18/45 (40%), Positives = 20/45 (44%), Gaps = 5/45 (11%)
 Frame = -3

Query: 331 PLVQKPLQQTCCLL-----ITRHSECFLQGSGNRSSHPLLVRTAG 212
           P VQKP  QT CLL     +T H  CFL   G       L+   G
Sbjct: 673 PHVQKPKIQTPCLLPGEDLVTDHLRCFLMPDGREDETQCLIPAEG 717


>AE014297-1382|AAF54700.3| 1993|Drosophila melanogaster CG6939-PA,
            isoform A protein.
          Length = 1993

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 18/45 (40%), Positives = 20/45 (44%), Gaps = 5/45 (11%)
 Frame = -3

Query: 331  PLVQKPLQQTCCLL-----ITRHSECFLQGSGNRSSHPLLVRTAG 212
            P VQKP  QT CLL     +T H  CFL   G       L+   G
Sbjct: 917  PHVQKPKIQTPCLLPGEDLVTDHLRCFLMPDGREDETQCLIPAEG 961


>AE014297-1381|AAN13531.2| 1973|Drosophila melanogaster CG6939-PB,
            isoform B protein.
          Length = 1973

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 18/45 (40%), Positives = 20/45 (44%), Gaps = 5/45 (11%)
 Frame = -3

Query: 331  PLVQKPLQQTCCLL-----ITRHSECFLQGSGNRSSHPLLVRTAG 212
            P VQKP  QT CLL     +T H  CFL   G       L+   G
Sbjct: 897  PHVQKPKIQTPCLLPGEDLVTDHLRCFLMPDGREDETQCLIPAEG 941


>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
             protein.
          Length = 23015

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +3

Query: 252   PLPCRKHSECRVMSKQHVC 308
             P PC  +S+CRV ++Q VC
Sbjct: 13584 PTPCGPNSQCRVSNEQAVC 13602



 Score = 28.7 bits (61), Expect = 6.6
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = +3

Query: 252   PLPCRKHSECRVMSKQHVC 308
             P PC  +S+CRV+++Q +C
Sbjct: 14541 PSPCGPNSQCRVVNQQAIC 14559



 Score = 28.3 bits (60), Expect = 8.7
 Identities = 15/46 (32%), Positives = 21/46 (45%)
 Frame = +3

Query: 249   FPLPCRKHSECRVMSKQHVCCNGFCTKGIKATAAIQSTTPVQVLSS 386
             +P PC  +S CR+ +++ VC    C  G       Q   P   LSS
Sbjct: 20811 YPSPCGPNSICRIQNEKAVC---ECLPGFFGNPLAQGCRPECTLSS 20853


>AE014297-1042|AAF54451.1|  334|Drosophila melanogaster CG12947-PA
           protein.
          Length = 334

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
 Frame = +3

Query: 210 CPAVRTSSGWLDLFPLPCRKHSECRVMSKQHVCCNGF----CTKGI 335
           CP  R +     LFP  C+   +C V  +  +CC+ F    C  G+
Sbjct: 144 CP--RENEVRFQLFPKICKADRDCAVWQRDELCCDIFGASSCVSGV 187


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,382,666
Number of Sequences: 53049
Number of extensions: 338215
Number of successful extensions: 1053
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1049
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2517878700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)