Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte21m24
(513 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81527-2|CAB04270.1| 361|Caenorhabditis elegans Hypothetical pr... 31 0.37
U39655-1|AAA80408.1| 395|Caenorhabditis elegans Hypothetical pr... 31 0.37
Z83240-3|CAB05813.2| 483|Caenorhabditis elegans Hypothetical pr... 29 2.6
U10402-9|AAA19065.1| 892|Caenorhabditis elegans Gro-1 operon ge... 27 6.0
AY052769-1|AAL14108.1| 885|Caenorhabditis elegans GOP-1 protein. 27 6.0
AL023847-5|CAA19551.1| 247|Caenorhabditis elegans Hypothetical ... 27 6.0
AF106573-8|ABC48249.1| 309|Caenorhabditis elegans Hypothetical ... 27 6.0
Z99169-2|CAB16307.1| 1334|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z46787-22|CAO78708.1| 666|Caenorhabditis elegans Hypothetical p... 27 7.9
Z46787-21|CAO78707.1| 714|Caenorhabditis elegans Hypothetical p... 27 7.9
Z46787-20|CAC42257.1| 791|Caenorhabditis elegans Hypothetical p... 27 7.9
Z46787-19|CAO78706.1| 801|Caenorhabditis elegans Hypothetical p... 27 7.9
Z46787-18|CAO78705.1| 805|Caenorhabditis elegans Hypothetical p... 27 7.9
Z46787-17|CAO78704.1| 863|Caenorhabditis elegans Hypothetical p... 27 7.9
Z46787-16|CAO78703.1| 821|Caenorhabditis elegans Hypothetical p... 27 7.9
Z46787-15|CAO78702.1| 829|Caenorhabditis elegans Hypothetical p... 27 7.9
Z35596-8|CAO78718.1| 666|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z35596-7|CAO78717.1| 714|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z35596-6|CAA84644.2| 791|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z35596-5|CAO78716.1| 801|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z35596-4|CAO78715.1| 805|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z35596-3|CAO78714.1| 863|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z35596-2|CAO78713.1| 821|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z35596-1|CAO78712.1| 829|Caenorhabditis elegans Hypothetical pr... 27 7.9
AF257518-1|AAF68999.1| 791|Caenorhabditis elegans HERG-like pot... 27 7.9
AF016436-3|AAC25896.1| 331|Caenorhabditis elegans Serpentine re... 27 7.9
>Z81527-2|CAB04270.1| 361|Caenorhabditis elegans Hypothetical
protein F35E12.2 protein.
Length = 361
Score = 31.5 bits (68), Expect = 0.37
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Frame = +1
Query: 265 LSNAVLMAWSSRFIKRRFY-LSNNNTMDNFFAFTTTRF-VSQDFLKLSTMSKSFKA 426
++N ++A S F+KR+ Y SNN T+ NF+ + + + DF K+ SK +KA
Sbjct: 195 VTNCRMVARLSNFLKRQKYSTSNNITIVNFYDVKSPSYLIGNDFSKIVVFSK-YKA 249
>U39655-1|AAA80408.1| 395|Caenorhabditis elegans Hypothetical
protein C46F4.1 protein.
Length = 395
Score = 31.5 bits (68), Expect = 0.37
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +1
Query: 277 VLMAWSSRFIKRRFYLSNNNTMDNFFAFTTTRFVS 381
V + WS F + RF+ N NT+ + AFTTT V+
Sbjct: 99 VQLLWSEAFTRYRFFNVNLNTVFHTIAFTTTIVVA 133
>Z83240-3|CAB05813.2| 483|Caenorhabditis elegans Hypothetical
protein T23H4.1 protein.
Length = 483
Score = 28.7 bits (61), Expect = 2.6
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Frame = +1
Query: 223 IWSNMLTIISYLSILS---NAVLMAWSSRFIKRRFYLSNNNTMDNFFAFTTTRFVSQDFL 393
+W ML++IS+ SILS ++ +FI RR L++ N + F FV +D++
Sbjct: 314 LWYTMLSLISFGSILSWIFASIPFNQRRQFIARRLELADVNFEKSRFKQELDEFV-RDYI 372
Query: 394 KL 399
K+
Sbjct: 373 KI 374
>U10402-9|AAA19065.1| 892|Caenorhabditis elegans Gro-1 operon gene
protein 1 protein.
Length = 892
Score = 27.5 bits (58), Expect = 6.0
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +1
Query: 241 TIISYLSILSNAVLMAWSSRFIKRRFYLSNNNTMDNFFAFTTTRF-VSQDFLKLSTMSKS 417
+IIS+ L N +MA+ F+K + N T+ FF TT F + + LKL ++S
Sbjct: 121 SIISHKFDLQNDEIMAYYISFLKTLSFKLNPATIHFFFNETTEEFPLLVEVLKLYNWNES 180
>AY052769-1|AAL14108.1| 885|Caenorhabditis elegans GOP-1 protein.
Length = 885
Score = 27.5 bits (58), Expect = 6.0
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +1
Query: 241 TIISYLSILSNAVLMAWSSRFIKRRFYLSNNNTMDNFFAFTTTRF-VSQDFLKLSTMSKS 417
+IIS+ L N +MA+ F+K + N T+ FF TT F + + LKL ++S
Sbjct: 114 SIISHKFDLQNDEIMAYYISFLKTLSFKLNPATIHFFFNETTEEFPLLVEVLKLYNWNES 173
>AL023847-5|CAA19551.1| 247|Caenorhabditis elegans Hypothetical
protein Y57A10C.9 protein.
Length = 247
Score = 27.5 bits (58), Expect = 6.0
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +1
Query: 226 WSNM-LTIISYLSILSNAVLMAWSSRFIKRRFYLSNNNTMDNFFAFTTTRFVSQDFLKLS 402
WSN+ L Y I +N+ L A +F+ Y+S +NT+ F + FV K+S
Sbjct: 75 WSNVSLDYNPYYIIFTNSFLPAKYKKFL---LYVSYSNTIAGFLIVIMSMFVFAGIRKIS 131
>AF106573-8|ABC48249.1| 309|Caenorhabditis elegans Hypothetical
protein F52D2.8b protein.
Length = 309
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +2
Query: 80 EIKNSYLCSELILYHFVYRVSYLK--TDITQTSFYWLRDEL 196
+ +NSY CS+L+++ F ++ Y+ D T +RD+L
Sbjct: 204 KFENSYFCSKLLVHLFHFQCFYINEMLDFTTQVAVKIRDDL 244
>Z99169-2|CAB16307.1| 1334|Caenorhabditis elegans Hypothetical
protein C26H9A.2 protein.
Length = 1334
Score = 27.1 bits (57), Expect = 7.9
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 304 IKRRFYLSNNNTMDNFFAFTTTRFVSQDFLKLSTMS 411
I+R F + N + F T+T SQD LKLS ++
Sbjct: 520 IRRMFEMYEKNIQNASFTVTSTSSRSQDQLKLSLLT 555
>Z46787-22|CAO78708.1| 666|Caenorhabditis elegans Hypothetical
protein C30D11.1h protein.
Length = 666
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 229 TKYLNQNDRAIKLVSKPIKTGLRY 158
T Y+N+ND A ++VS P K Y
Sbjct: 143 TTYVNENDEACQVVSDPGKIATHY 166
>Z46787-21|CAO78707.1| 714|Caenorhabditis elegans Hypothetical
protein C30D11.1g protein.
Length = 714
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 229 TKYLNQNDRAIKLVSKPIKTGLRY 158
T Y+N+ND A ++VS P K Y
Sbjct: 143 TTYVNENDEACQVVSDPGKIATHY 166
>Z46787-20|CAC42257.1| 791|Caenorhabditis elegans Hypothetical
protein C30D11.1f protein.
Length = 791
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 229 TKYLNQNDRAIKLVSKPIKTGLRY 158
T Y+N+ND A ++VS P K Y
Sbjct: 143 TTYVNENDEACQVVSDPGKIATHY 166
>Z46787-19|CAO78706.1| 801|Caenorhabditis elegans Hypothetical
protein C30D11.1e protein.
Length = 801
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 229 TKYLNQNDRAIKLVSKPIKTGLRY 158
T Y+N+ND A ++VS P K Y
Sbjct: 153 TTYVNENDEACQVVSDPGKIATHY 176
>Z46787-18|CAO78705.1| 805|Caenorhabditis elegans Hypothetical
protein C30D11.1d protein.
Length = 805
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 229 TKYLNQNDRAIKLVSKPIKTGLRY 158
T Y+N+ND A ++VS P K Y
Sbjct: 157 TTYVNENDEACQVVSDPGKIATHY 180
>Z46787-17|CAO78704.1| 863|Caenorhabditis elegans Hypothetical
protein C30D11.1c protein.
Length = 863
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 229 TKYLNQNDRAIKLVSKPIKTGLRY 158
T Y+N+ND A ++VS P K Y
Sbjct: 215 TTYVNENDEACQVVSDPGKIATHY 238
>Z46787-16|CAO78703.1| 821|Caenorhabditis elegans Hypothetical
protein C30D11.1b protein.
Length = 821
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 229 TKYLNQNDRAIKLVSKPIKTGLRY 158
T Y+N+ND A ++VS P K Y
Sbjct: 173 TTYVNENDEACQVVSDPGKIATHY 196
>Z46787-15|CAO78702.1| 829|Caenorhabditis elegans Hypothetical
protein C30D11.1a protein.
Length = 829
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 229 TKYLNQNDRAIKLVSKPIKTGLRY 158
T Y+N+ND A ++VS P K Y
Sbjct: 181 TTYVNENDEACQVVSDPGKIATHY 204
>Z35596-8|CAO78718.1| 666|Caenorhabditis elegans Hypothetical
protein C30D11.1h protein.
Length = 666
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 229 TKYLNQNDRAIKLVSKPIKTGLRY 158
T Y+N+ND A ++VS P K Y
Sbjct: 143 TTYVNENDEACQVVSDPGKIATHY 166
>Z35596-7|CAO78717.1| 714|Caenorhabditis elegans Hypothetical
protein C30D11.1g protein.
Length = 714
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 229 TKYLNQNDRAIKLVSKPIKTGLRY 158
T Y+N+ND A ++VS P K Y
Sbjct: 143 TTYVNENDEACQVVSDPGKIATHY 166
>Z35596-6|CAA84644.2| 791|Caenorhabditis elegans Hypothetical
protein C30D11.1f protein.
Length = 791
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 229 TKYLNQNDRAIKLVSKPIKTGLRY 158
T Y+N+ND A ++VS P K Y
Sbjct: 143 TTYVNENDEACQVVSDPGKIATHY 166
>Z35596-5|CAO78716.1| 801|Caenorhabditis elegans Hypothetical
protein C30D11.1e protein.
Length = 801
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 229 TKYLNQNDRAIKLVSKPIKTGLRY 158
T Y+N+ND A ++VS P K Y
Sbjct: 153 TTYVNENDEACQVVSDPGKIATHY 176
>Z35596-4|CAO78715.1| 805|Caenorhabditis elegans Hypothetical
protein C30D11.1d protein.
Length = 805
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 229 TKYLNQNDRAIKLVSKPIKTGLRY 158
T Y+N+ND A ++VS P K Y
Sbjct: 157 TTYVNENDEACQVVSDPGKIATHY 180
>Z35596-3|CAO78714.1| 863|Caenorhabditis elegans Hypothetical
protein C30D11.1c protein.
Length = 863
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 229 TKYLNQNDRAIKLVSKPIKTGLRY 158
T Y+N+ND A ++VS P K Y
Sbjct: 215 TTYVNENDEACQVVSDPGKIATHY 238
>Z35596-2|CAO78713.1| 821|Caenorhabditis elegans Hypothetical
protein C30D11.1b protein.
Length = 821
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 229 TKYLNQNDRAIKLVSKPIKTGLRY 158
T Y+N+ND A ++VS P K Y
Sbjct: 173 TTYVNENDEACQVVSDPGKIATHY 196
>Z35596-1|CAO78712.1| 829|Caenorhabditis elegans Hypothetical
protein C30D11.1a protein.
Length = 829
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 229 TKYLNQNDRAIKLVSKPIKTGLRY 158
T Y+N+ND A ++VS P K Y
Sbjct: 181 TTYVNENDEACQVVSDPGKIATHY 204
>AF257518-1|AAF68999.1| 791|Caenorhabditis elegans HERG-like
potassium channel protein.
Length = 791
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 229 TKYLNQNDRAIKLVSKPIKTGLRY 158
T Y+N+ND A ++VS P K Y
Sbjct: 143 TTYVNENDEACQVVSDPGKIATHY 166
>AF016436-3|AAC25896.1| 331|Caenorhabditis elegans Serpentine
receptor, class j protein40 protein.
Length = 331
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/25 (44%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Frame = +2
Query: 110 LILYHFVYR-VSYLKTDITQTSFYW 181
LIL HFVYR ++ + +T+ +F+W
Sbjct: 105 LILVHFVYRYLAIQNSSLTRENFHW 129
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,610,452
Number of Sequences: 27780
Number of extensions: 231705
Number of successful extensions: 607
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 607
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 985905834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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