Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21m22
         (366 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF197345-1|AAF07212.1| 1013|Drosophila melanogaster prominin-lik...    27   7.5  
AF127935-1|AAD22487.2| 1013|Drosophila melanogaster prominin-lik...    27   7.5  
AE014296-3339|AAF51579.1|  291|Drosophila melanogaster CG5665-PA...    27   7.5  
AE014296-563|AAN11531.1| 1013|Drosophila melanogaster CG7740-PC,...    27   7.5  
AE014296-562|AAN11530.1| 1013|Drosophila melanogaster CG7740-PB,...    27   7.5  
AE014296-561|AAF47716.2| 1013|Drosophila melanogaster CG7740-PA,...    27   7.5  
BT024189-1|ABC86251.1|  442|Drosophila melanogaster RH55216p pro...    27   10.0 
AE014296-111|AAF47394.1|  442|Drosophila melanogaster CG17181-PA...    27   10.0 

>AF197345-1|AAF07212.1| 1013|Drosophila melanogaster prominin-like
           protein protein.
          Length = 1013

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +2

Query: 50  SLRVYFCDICILMLVGINYFLLAEVV-PVSIAPFEDRKGN 166
           ++ + FC    + LVG+ YF+L  V    + AP  D++ N
Sbjct: 538 AILLIFCVFSFIALVGLFYFMLGMVTYQGACAPLRDQENN 577


>AF127935-1|AAD22487.2| 1013|Drosophila melanogaster prominin-like
           protein protein.
          Length = 1013

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +2

Query: 50  SLRVYFCDICILMLVGINYFLLAEVV-PVSIAPFEDRKGN 166
           ++ + FC    + LVG+ YF+L  V    + AP  D++ N
Sbjct: 538 AILLIFCVFSFIALVGLFYFMLGMVTYQGACAPLRDQENN 577


>AE014296-3339|AAF51579.1|  291|Drosophila melanogaster CG5665-PA
           protein.
          Length = 291

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -3

Query: 214 QTSRIWRHSRKSSARAVAFPVFEWGDT 134
           + S++W+HSR S  R V      W +T
Sbjct: 18  EASKLWKHSRFSKGRKVVILATGWTNT 44


>AE014296-563|AAN11531.1| 1013|Drosophila melanogaster CG7740-PC,
           isoform C protein.
          Length = 1013

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +2

Query: 50  SLRVYFCDICILMLVGINYFLLAEVV-PVSIAPFEDRKGN 166
           ++ + FC    + LVG+ YF+L  V    + AP  D++ N
Sbjct: 538 AILLIFCVFSFIALVGLFYFMLGMVTYQGACAPLRDQENN 577


>AE014296-562|AAN11530.1| 1013|Drosophila melanogaster CG7740-PB,
           isoform B protein.
          Length = 1013

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +2

Query: 50  SLRVYFCDICILMLVGINYFLLAEVV-PVSIAPFEDRKGN 166
           ++ + FC    + LVG+ YF+L  V    + AP  D++ N
Sbjct: 538 AILLIFCVFSFIALVGLFYFMLGMVTYQGACAPLRDQENN 577


>AE014296-561|AAF47716.2| 1013|Drosophila melanogaster CG7740-PA,
           isoform A protein.
          Length = 1013

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +2

Query: 50  SLRVYFCDICILMLVGINYFLLAEVV-PVSIAPFEDRKGN 166
           ++ + FC    + LVG+ YF+L  V    + AP  D++ N
Sbjct: 538 AILLIFCVFSFIALVGLFYFMLGMVTYQGACAPLRDQENN 577


>BT024189-1|ABC86251.1|  442|Drosophila melanogaster RH55216p
           protein.
          Length = 442

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -1

Query: 225 ESRGRLPGSGVTVGNPPQEQLPFRSSNGAILTGTTSA 115
           ++RG +PGSG   GN P    P R     + +GT SA
Sbjct: 257 KNRGGVPGSGAASGNRPPSS-PKR-QQAEVTSGTISA 291


>AE014296-111|AAF47394.1|  442|Drosophila melanogaster CG17181-PA
           protein.
          Length = 442

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -1

Query: 225 ESRGRLPGSGVTVGNPPQEQLPFRSSNGAILTGTTSA 115
           ++RG +PGSG   GN P    P R     + +GT SA
Sbjct: 257 KNRGGVPGSGAASGNRPPSS-PKR-QQAEVTSGTISA 291


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,264,504
Number of Sequences: 53049
Number of extensions: 332719
Number of successful extensions: 833
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 833
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 943048980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)