Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21m19
         (491 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-2394|ABI31314.1| 1597|Drosophila melanogaster CG31731-P...    29   4.5  
AY051626-1|AAK93050.1|  504|Drosophila melanogaster GH27419p pro...    28   7.9  
AE014296-3221|AAF49108.1|  504|Drosophila melanogaster CG8733-PA...    28   7.9  

>AE014134-2394|ABI31314.1| 1597|Drosophila melanogaster CG31731-PB,
           isoform B protein.
          Length = 1597

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 20/68 (29%), Positives = 31/68 (45%)
 Frame = -2

Query: 301 CLSSP*FYRPLVIWQTTRNKRTNITMDPITISS*FKLKLSPQDDASVLFLPISLIFAMLH 122
           C S+  F   L I+QT  NKR N     + +    K   S      V+ +  S ++AML+
Sbjct: 358 CFSTNTFLEGLDIFQTFSNKRKNREFGAVDVFRVIKSNSSTMFSVYVVLVFQSFLYAMLY 417

Query: 121 CTEVHCLF 98
              + C+F
Sbjct: 418 -NYLGCVF 424


>AY051626-1|AAK93050.1|  504|Drosophila melanogaster GH27419p
           protein.
          Length = 504

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -1

Query: 365 RRVTKANAISKTCITSTL*QIVSFFPIVLPS 273
           RR    +A+++ CI S L +IV  F +VLP+
Sbjct: 447 RRRCLGDALARACIFSFLVRIVQHFSVVLPA 477


>AE014296-3221|AAF49108.1|  504|Drosophila melanogaster CG8733-PA
           protein.
          Length = 504

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -1

Query: 365 RRVTKANAISKTCITSTL*QIVSFFPIVLPS 273
           RR    +A+++ CI S L +IV  F +VLP+
Sbjct: 447 RRRCLGDALARACIFSFLVRIVQHFSVVLPA 477


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,157,985
Number of Sequences: 53049
Number of extensions: 344072
Number of successful extensions: 701
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 701
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1721789184
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)