Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte21m18
(535 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC067832-1|AAH67832.1| 274|Homo sapiens ubiquinol-cytochrome c ... 38 0.029
L32977-1|AAC41754.1| 274|Homo sapiens Rieske Fe-S protein protein. 37 0.039
BC010035-1|AAH10035.1| 274|Homo sapiens ubiquinol-cytochrome c ... 37 0.039
BC000649-1|AAH00649.1| 274|Homo sapiens ubiquinol-cytochrome c ... 37 0.039
AC007786-1|AAD38242.1| 274|Homo sapiens UCRI_HUMAN protein. 37 0.039
Z82206-1|CAI42711.1| 272|Homo sapiens ubiquinol-cytochrome c re... 36 0.090
AK127126-1|BAC86841.1| 164|Homo sapiens protein ( Homo sapiens ... 33 0.63
BC030220-1|AAH30220.1| 438|Homo sapiens netrin G1 protein. 32 1.5
AY781194-1|AAW47415.1| 111|Homo sapiens netrin G1 isoform G1b p... 32 1.5
AY764267-1|AAW47414.1| 153|Homo sapiens netrin G1 isoform G1o p... 32 1.5
AY764266-1|AAW47413.1| 133|Homo sapiens netrin G1 isoform G1n p... 32 1.5
AY764265-1|AAW47412.1| 209|Homo sapiens netrin G1 isoform G1m p... 32 1.5
AY764264-1|AAW47411.1| 57|Homo sapiens netrin G1 isoform G1l p... 32 1.5
AY764263-1|AAW47410.1| 88|Homo sapiens netrin G1 isoform G1e p... 32 1.5
AY764262-1|AAW47409.1| 108|Homo sapiens netrin G1 isoform G1d p... 32 1.5
AY764261-1|AAW47408.1| 66|Homo sapiens netrin G1 isoform G1c p... 32 1.5
AY764260-1|AAW47407.1| 167|Homo sapiens netrin G1 isoform G1a p... 32 1.5
AY358365-1|AAQ88731.1| 438|Homo sapiens YLSR571 protein. 32 1.5
AL590427-6|CAH73385.1| 480|Homo sapiens netrin G1 protein. 32 1.5
AL590427-5|CAH73382.1| 494|Homo sapiens netrin G1 protein. 32 1.5
AL590427-4|CAH73383.1| 438|Homo sapiens netrin G1 protein. 32 1.5
AL590427-3|CAH73381.1| 539|Homo sapiens netrin G1 protein. 32 1.5
AL590427-2|CAH73384.1| 460|Homo sapiens netrin G1 protein. 32 1.5
AL513187-6|CAH73829.1| 480|Homo sapiens netrin G1 protein. 32 1.5
AL513187-5|CAH73831.1| 494|Homo sapiens netrin G1 protein. 32 1.5
AL513187-4|CAH73832.1| 438|Homo sapiens netrin G1 protein. 32 1.5
AL513187-3|CAH73830.1| 539|Homo sapiens netrin G1 protein. 32 1.5
AL513187-2|CAH73833.1| 460|Homo sapiens netrin G1 protein. 32 1.5
U70323-1|AAB19200.1| 1312|Homo sapiens ataxin-2 protein. 31 1.9
BC114546-1|AAI14547.1| 1006|Homo sapiens ATXN2 protein protein. 31 1.9
BC111757-1|AAI11758.1| 1127|Homo sapiens ATXN2 protein protein. 31 1.9
AK128613-1|BAC87528.1| 258|Homo sapiens autosomal dominant, at... 31 1.9
>BC067832-1|AAH67832.1| 274|Homo sapiens ubiquinol-cytochrome c
reductase, Rieske iron-sulfur polypeptide 1 protein.
Length = 274
Score = 37.5 bits (83), Expect = 0.029
Identities = 19/73 (26%), Positives = 36/73 (49%)
Frame = +3
Query: 285 VQVRYHKECPRLHRDIEFPNFNPYRKDQYKDVRKTRWGAGDEKSGVTYTIGFFGLLCGSY 464
V + H H DI+ P+F+ YR+ + D K+ + + + G +Y + + +Y
Sbjct: 68 VGLNVHASVCYSHTDIKVPDFSEYRRLEVLDSTKSSRESSEARKGFSYLVTGVTTVGVAY 127
Query: 465 AVKSELVHFISYM 503
A K+ + F+S M
Sbjct: 128 AAKNAVTQFVSSM 140
>L32977-1|AAC41754.1| 274|Homo sapiens Rieske Fe-S protein protein.
Length = 274
Score = 37.1 bits (82), Expect = 0.039
Identities = 17/61 (27%), Positives = 33/61 (54%)
Frame = +3
Query: 321 HRDIEFPNFNPYRKDQYKDVRKTRWGAGDEKSGVTYTIGFFGLLCGSYAVKSELVHFISY 500
H DI+ P+F+ YR+ + D K+ + + + G +Y + + +YA K+ + F+S
Sbjct: 80 HTDIKVPDFSEYRRLEVLDSTKSSRESSEARKGFSYLVTGVTTVGVAYAAKNAVTQFVSS 139
Query: 501 M 503
M
Sbjct: 140 M 140
>BC010035-1|AAH10035.1| 274|Homo sapiens ubiquinol-cytochrome c
reductase, Rieske iron-sulfur polypeptide 1 protein.
Length = 274
Score = 37.1 bits (82), Expect = 0.039
Identities = 17/61 (27%), Positives = 33/61 (54%)
Frame = +3
Query: 321 HRDIEFPNFNPYRKDQYKDVRKTRWGAGDEKSGVTYTIGFFGLLCGSYAVKSELVHFISY 500
H DI+ P+F+ YR+ + D K+ + + + G +Y + + +YA K+ + F+S
Sbjct: 80 HTDIKVPDFSEYRRLEVLDSTKSSRESSEARKGFSYLVTGVTTVGVAYAAKNAVTQFVSS 139
Query: 501 M 503
M
Sbjct: 140 M 140
>BC000649-1|AAH00649.1| 274|Homo sapiens ubiquinol-cytochrome c
reductase, Rieske iron-sulfur polypeptide 1 protein.
Length = 274
Score = 37.1 bits (82), Expect = 0.039
Identities = 17/61 (27%), Positives = 33/61 (54%)
Frame = +3
Query: 321 HRDIEFPNFNPYRKDQYKDVRKTRWGAGDEKSGVTYTIGFFGLLCGSYAVKSELVHFISY 500
H DI+ P+F+ YR+ + D K+ + + + G +Y + + +YA K+ + F+S
Sbjct: 80 HTDIKVPDFSEYRRLEVLDSTKSSRESSEARKGFSYLVTGVTTVGVAYAAKNAVTQFVSS 139
Query: 501 M 503
M
Sbjct: 140 M 140
>AC007786-1|AAD38242.1| 274|Homo sapiens UCRI_HUMAN protein.
Length = 274
Score = 37.1 bits (82), Expect = 0.039
Identities = 17/61 (27%), Positives = 33/61 (54%)
Frame = +3
Query: 321 HRDIEFPNFNPYRKDQYKDVRKTRWGAGDEKSGVTYTIGFFGLLCGSYAVKSELVHFISY 500
H DI+ P+F+ YR+ + D K+ + + + G +Y + + +YA K+ + F+S
Sbjct: 80 HTDIKVPDFSEYRRLEVLDSTKSSRESSEARKGFSYLVTGVTTVGVAYAAKNAVTQFVSS 139
Query: 501 M 503
M
Sbjct: 140 M 140
>Z82206-1|CAI42711.1| 272|Homo sapiens ubiquinol-cytochrome c
reductase, Rieske iron-sulfur polypeptide-like 1
protein.
Length = 272
Score = 35.9 bits (79), Expect = 0.090
Identities = 16/61 (26%), Positives = 33/61 (54%)
Frame = +3
Query: 321 HRDIEFPNFNPYRKDQYKDVRKTRWGAGDEKSGVTYTIGFFGLLCGSYAVKSELVHFISY 500
H D++ P+F+ YR+ + D K+ + + + G +Y + + +YA K+ + F+S
Sbjct: 78 HTDVKVPDFSEYRRLEVLDSTKSSRESTEARKGFSYLVTGVTTVGVAYAAKNAVTQFVSS 137
Query: 501 M 503
M
Sbjct: 138 M 138
>AK127126-1|BAC86841.1| 164|Homo sapiens protein ( Homo sapiens
cDNA FLJ45183 fis, clone BRAWH3047946. ).
Length = 164
Score = 33.1 bits (72), Expect = 0.63
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = -3
Query: 491 EMY*LGFYSIRSTEQSEEANRVGHSGLLVARTPSCL-SHI--LVLIFPVRIKVWE 336
E+Y +SIR G +GLL TP C S I VL+FPVR +WE
Sbjct: 67 ELYTTCGFSIRKQGSDAHLLEAGGAGLLDLNTPPCCRSRIPGSVLMFPVRAGLWE 121
>BC030220-1|AAH30220.1| 438|Homo sapiens netrin G1 protein.
Length = 438
Score = 31.9 bits (69), Expect = 1.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 108 NNARAICPNLWTGLCCQNLTC 170
NN R +CP +TG+ C+ L C
Sbjct: 381 NNVRCLCPAAYTGILCEKLRC 401
>AY781194-1|AAW47415.1| 111|Homo sapiens netrin G1 isoform G1b
protein.
Length = 111
Score = 31.9 bits (69), Expect = 1.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 108 NNARAICPNLWTGLCCQNLTC 170
NN R +CP +TG+ C+ L C
Sbjct: 82 NNVRCLCPAAYTGILCEKLRC 102
>AY764267-1|AAW47414.1| 153|Homo sapiens netrin G1 isoform G1o
protein.
Length = 153
Score = 31.9 bits (69), Expect = 1.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 108 NNARAICPNLWTGLCCQNLTC 170
NN R +CP +TG+ C+ L C
Sbjct: 124 NNVRCLCPAAYTGILCEKLRC 144
>AY764266-1|AAW47413.1| 133|Homo sapiens netrin G1 isoform G1n
protein.
Length = 133
Score = 31.9 bits (69), Expect = 1.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 108 NNARAICPNLWTGLCCQNLTC 170
NN R +CP +TG+ C+ L C
Sbjct: 104 NNVRCLCPAAYTGILCEKLRC 124
>AY764265-1|AAW47412.1| 209|Homo sapiens netrin G1 isoform G1m
protein.
Length = 209
Score = 31.9 bits (69), Expect = 1.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 108 NNARAICPNLWTGLCCQNLTC 170
NN R +CP +TG+ C+ L C
Sbjct: 180 NNVRCLCPAAYTGILCEKLRC 200
>AY764264-1|AAW47411.1| 57|Homo sapiens netrin G1 isoform G1l
protein.
Length = 57
Score = 31.9 bits (69), Expect = 1.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 108 NNARAICPNLWTGLCCQNLTC 170
NN R +CP +TG+ C+ L C
Sbjct: 28 NNVRCLCPAAYTGILCEKLRC 48
>AY764263-1|AAW47410.1| 88|Homo sapiens netrin G1 isoform G1e
protein.
Length = 88
Score = 31.9 bits (69), Expect = 1.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 108 NNARAICPNLWTGLCCQNLTC 170
NN R +CP +TG+ C+ L C
Sbjct: 59 NNVRCLCPAAYTGILCEKLRC 79
>AY764262-1|AAW47409.1| 108|Homo sapiens netrin G1 isoform G1d
protein.
Length = 108
Score = 31.9 bits (69), Expect = 1.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 108 NNARAICPNLWTGLCCQNLTC 170
NN R +CP +TG+ C+ L C
Sbjct: 79 NNVRCLCPAAYTGILCEKLRC 99
>AY764261-1|AAW47408.1| 66|Homo sapiens netrin G1 isoform G1c
protein.
Length = 66
Score = 31.9 bits (69), Expect = 1.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 108 NNARAICPNLWTGLCCQNLTC 170
NN R +CP +TG+ C+ L C
Sbjct: 37 NNVRCLCPAAYTGILCEKLRC 57
>AY764260-1|AAW47407.1| 167|Homo sapiens netrin G1 isoform G1a
protein.
Length = 167
Score = 31.9 bits (69), Expect = 1.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 108 NNARAICPNLWTGLCCQNLTC 170
NN R +CP +TG+ C+ L C
Sbjct: 138 NNVRCLCPAAYTGILCEKLRC 158
>AY358365-1|AAQ88731.1| 438|Homo sapiens YLSR571 protein.
Length = 438
Score = 31.9 bits (69), Expect = 1.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 108 NNARAICPNLWTGLCCQNLTC 170
NN R +CP +TG+ C+ L C
Sbjct: 381 NNVRCLCPAAYTGILCEKLRC 401
>AL590427-6|CAH73385.1| 480|Homo sapiens netrin G1 protein.
Length = 480
Score = 31.9 bits (69), Expect = 1.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 108 NNARAICPNLWTGLCCQNLTC 170
NN R +CP +TG+ C+ L C
Sbjct: 423 NNVRCLCPAAYTGILCEKLRC 443
>AL590427-5|CAH73382.1| 494|Homo sapiens netrin G1 protein.
Length = 494
Score = 31.9 bits (69), Expect = 1.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 108 NNARAICPNLWTGLCCQNLTC 170
NN R +CP +TG+ C+ L C
Sbjct: 437 NNVRCLCPAAYTGILCEKLRC 457
>AL590427-4|CAH73383.1| 438|Homo sapiens netrin G1 protein.
Length = 438
Score = 31.9 bits (69), Expect = 1.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 108 NNARAICPNLWTGLCCQNLTC 170
NN R +CP +TG+ C+ L C
Sbjct: 381 NNVRCLCPAAYTGILCEKLRC 401
>AL590427-3|CAH73381.1| 539|Homo sapiens netrin G1 protein.
Length = 539
Score = 31.9 bits (69), Expect = 1.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 108 NNARAICPNLWTGLCCQNLTC 170
NN R +CP +TG+ C+ L C
Sbjct: 482 NNVRCLCPAAYTGILCEKLRC 502
>AL590427-2|CAH73384.1| 460|Homo sapiens netrin G1 protein.
Length = 460
Score = 31.9 bits (69), Expect = 1.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 108 NNARAICPNLWTGLCCQNLTC 170
NN R +CP +TG+ C+ L C
Sbjct: 403 NNVRCLCPAAYTGILCEKLRC 423
>AL513187-6|CAH73829.1| 480|Homo sapiens netrin G1 protein.
Length = 480
Score = 31.9 bits (69), Expect = 1.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 108 NNARAICPNLWTGLCCQNLTC 170
NN R +CP +TG+ C+ L C
Sbjct: 423 NNVRCLCPAAYTGILCEKLRC 443
>AL513187-5|CAH73831.1| 494|Homo sapiens netrin G1 protein.
Length = 494
Score = 31.9 bits (69), Expect = 1.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 108 NNARAICPNLWTGLCCQNLTC 170
NN R +CP +TG+ C+ L C
Sbjct: 437 NNVRCLCPAAYTGILCEKLRC 457
>AL513187-4|CAH73832.1| 438|Homo sapiens netrin G1 protein.
Length = 438
Score = 31.9 bits (69), Expect = 1.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 108 NNARAICPNLWTGLCCQNLTC 170
NN R +CP +TG+ C+ L C
Sbjct: 381 NNVRCLCPAAYTGILCEKLRC 401
>AL513187-3|CAH73830.1| 539|Homo sapiens netrin G1 protein.
Length = 539
Score = 31.9 bits (69), Expect = 1.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 108 NNARAICPNLWTGLCCQNLTC 170
NN R +CP +TG+ C+ L C
Sbjct: 482 NNVRCLCPAAYTGILCEKLRC 502
>AL513187-2|CAH73833.1| 460|Homo sapiens netrin G1 protein.
Length = 460
Score = 31.9 bits (69), Expect = 1.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 108 NNARAICPNLWTGLCCQNLTC 170
NN R +CP +TG+ C+ L C
Sbjct: 403 NNVRCLCPAAYTGILCEKLRC 423
>U70323-1|AAB19200.1| 1312|Homo sapiens ataxin-2 protein.
Length = 1312
Score = 31.5 bits (68), Expect = 1.9
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1
Query: 481 SSDFTAYDPQSNPKKPIV*VTPDFSSPAPHL 389
S+ + AY PQ P +P+V P + S PH+
Sbjct: 1034 STQYVAYSPQQFPNQPLVQHVPHYQSQHPHV 1064
>BC114546-1|AAI14547.1| 1006|Homo sapiens ATXN2 protein protein.
Length = 1006
Score = 31.5 bits (68), Expect = 1.9
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1
Query: 481 SSDFTAYDPQSNPKKPIV*VTPDFSSPAPHL 389
S+ + AY PQ P +P+V P + S PH+
Sbjct: 746 STQYVAYSPQQFPNQPLVQHVPHYQSQHPHV 776
>BC111757-1|AAI11758.1| 1127|Homo sapiens ATXN2 protein protein.
Length = 1127
Score = 31.5 bits (68), Expect = 1.9
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1
Query: 481 SSDFTAYDPQSNPKKPIV*VTPDFSSPAPHL 389
S+ + AY PQ P +P+V P + S PH+
Sbjct: 824 STQYVAYSPQQFPNQPLVQHVPHYQSQHPHV 854
>AK128613-1|BAC87528.1| 258|Homo sapiens autosomal dominant,
ataxin 2) protein.
Length = 258
Score = 31.5 bits (68), Expect = 1.9
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1
Query: 481 SSDFTAYDPQSNPKKPIV*VTPDFSSPAPHL 389
S+ + AY PQ P +P+V P + S PH+
Sbjct: 54 STQYVAYSPQQFPNQPLVQHVPHYQSQHPHV 84
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,182,813
Number of Sequences: 237096
Number of extensions: 1526764
Number of successful extensions: 10631
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 10437
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10630
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5216942984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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