Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte21m12
(592 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF493864-1|ABP65286.1| 247|Apis mellifera triosephoshpate isome... 23 2.2
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 23 3.0
EF051030-1|ABN05618.1| 118|Apis mellifera phosphoenolpyruvate c... 23 3.0
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 21 6.8
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 21 6.8
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.0
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.0
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.0
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.0
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.0
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 9.0
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 9.0
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 21 9.0
>EF493864-1|ABP65286.1| 247|Apis mellifera triosephoshpate
isomerase protein.
Length = 247
Score = 23.0 bits (47), Expect = 2.2
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 17 MPSSFLSYVK*LKLNNIYIVEHNASYQGFGGHFS 118
+PS +L+Y K + NNI I N +Y+ G F+
Sbjct: 42 VPSIYLTYAKNILPNNISIAGQN-TYKVAKGAFT 74
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 22.6 bits (46), Expect = 3.0
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 4/66 (6%)
Frame = +3
Query: 180 DTHLPAPNPTEKRPYSPFQDA---SNMAEMAVARLD-DLLNWGRKGSLWPMTFGLACCAV 347
D LP PT+K P QD + + V R++ +L G + P +V
Sbjct: 233 DAILPPSRPTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPGMLVTFAPAALTTEVKSV 292
Query: 348 EMMHIA 365
EM H A
Sbjct: 293 EMHHEA 298
>EF051030-1|ABN05618.1| 118|Apis mellifera phosphoenolpyruvate
carboxykinase protein.
Length = 118
Score = 22.6 bits (46), Expect = 3.0
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +3
Query: 108 ATSPNTVLSFMKKGVFTPVVS 170
AT+PN + + K +FT V S
Sbjct: 76 ATNPNAMKTIFKNTIFTNVAS 96
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 21.4 bits (43), Expect = 6.8
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 4/66 (6%)
Frame = +3
Query: 180 DTHLPAPNPTEKRPYSPFQDA---SNMAEMAVARLD-DLLNWGRKGSLWPMTFGLACCAV 347
D LP PT+K P QD + + V R++ +L G + P +V
Sbjct: 176 DAILPPTRPTDKALRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPAGLTTEVKSV 235
Query: 348 EMMHIA 365
EM H A
Sbjct: 236 EMHHEA 241
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 21.4 bits (43), Expect = 6.8
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 4/66 (6%)
Frame = +3
Query: 180 DTHLPAPNPTEKRPYSPFQDA---SNMAEMAVARLD-DLLNWGRKGSLWPMTFGLACCAV 347
D LP PT+K P QD + + V R++ +L G + P +V
Sbjct: 233 DAILPPTRPTDKALRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPAGLTTEVKSV 292
Query: 348 EMMHIA 365
EM H A
Sbjct: 293 EMHHEA 298
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.0 bits (42), Expect = 9.0
Identities = 8/29 (27%), Positives = 16/29 (55%)
Frame = +2
Query: 71 IVEHNASYQGFGGHFS*YSAFIYEKGCLY 157
I+ +N++ +GF G + ++ CLY
Sbjct: 73 ILMYNSADEGFDGTYQTSVVVTHDGSCLY 101
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.0 bits (42), Expect = 9.0
Identities = 8/29 (27%), Positives = 16/29 (55%)
Frame = +2
Query: 71 IVEHNASYQGFGGHFS*YSAFIYEKGCLY 157
I+ +N++ +GF G + ++ CLY
Sbjct: 73 ILMYNSADEGFDGTYQTSVVVTHDGSCLY 101
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.0 bits (42), Expect = 9.0
Identities = 8/29 (27%), Positives = 16/29 (55%)
Frame = +2
Query: 71 IVEHNASYQGFGGHFS*YSAFIYEKGCLY 157
I+ +N++ +GF G + ++ CLY
Sbjct: 73 ILMYNSADEGFDGTYQTSVVVTHDGSCLY 101
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.0 bits (42), Expect = 9.0
Identities = 8/29 (27%), Positives = 16/29 (55%)
Frame = +2
Query: 71 IVEHNASYQGFGGHFS*YSAFIYEKGCLY 157
I+ +N++ +GF G + ++ CLY
Sbjct: 73 ILMYNSADEGFDGTYQTSVVVTHDGSCLY 101
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.0 bits (42), Expect = 9.0
Identities = 8/29 (27%), Positives = 16/29 (55%)
Frame = +2
Query: 71 IVEHNASYQGFGGHFS*YSAFIYEKGCLY 157
I+ +N++ +GF G + ++ CLY
Sbjct: 73 ILMYNSADEGFDGTYQTSVVVTHDGSCLY 101
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.0 bits (42), Expect = 9.0
Identities = 9/36 (25%), Positives = 15/36 (41%)
Frame = -1
Query: 313 QREPFLPQFNKSSSRATAISAILLASWKGEYGRFSV 206
++ P L N + I+ + SW+G Y V
Sbjct: 226 RKSPSLTSLNAYLIKNQTITCPIKVSWRGNYSCLKV 261
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.0 bits (42), Expect = 9.0
Identities = 9/36 (25%), Positives = 15/36 (41%)
Frame = -1
Query: 313 QREPFLPQFNKSSSRATAISAILLASWKGEYGRFSV 206
++ P L N + I+ + SW+G Y V
Sbjct: 277 RKSPSLTSLNAYLIKNQTITCPIKVSWRGNYSCLKV 312
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.0 bits (42), Expect = 9.0
Identities = 9/36 (25%), Positives = 15/36 (41%)
Frame = -1
Query: 313 QREPFLPQFNKSSSRATAISAILLASWKGEYGRFSV 206
++ P L N + I+ + SW+G Y V
Sbjct: 226 RKSPSLTSLNAYLIKNQTITCPIKVSWRGNYSCLKV 261
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,795
Number of Sequences: 438
Number of extensions: 3750
Number of successful extensions: 17
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17237673
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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