Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte21m06
(277 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0048 - 5265595-5265783,5265882-5265992,5266259-5266547,526... 29 0.70
01_01_0826 + 6431621-6431917,6432356-6432505,6432614-6432796,643... 27 2.1
07_03_0443 + 18275397-18276355,18276394-18276931 27 2.8
03_06_0765 + 36104604-36105689 27 2.8
12_02_0455 - 19203028-19203186,19203485-19203859,19203981-192040... 26 5.0
09_04_0232 - 15882589-15882720,15882799-15882889,15882987-158830... 26 5.0
01_06_0810 - 32141657-32142105,32142986-32143034,32144961-32145110 26 5.0
11_01_0261 - 1989988-1990090,1990232-1990368,1990483-1990589,199... 25 6.5
09_04_0290 - 16429495-16429559,16430040-16430316,16430410-164305... 25 6.5
12_01_0259 - 1905291-1905393,1905536-1905672,1905787-1905893,190... 25 8.7
11_06_0656 + 25926192-25926289,25927530-25927659,25928248-259282... 25 8.7
08_02_1290 - 25927667-25928950 25 8.7
08_01_0746 - 6959210-6959344,6959467-6959776,6960102-6960589 25 8.7
05_07_0010 - 27024013-27024171,27024286-27024699,27025389-270254... 25 8.7
05_05_0094 + 22343593-22343865,22345246-22345323,22345435-223455... 25 8.7
01_03_0182 + 13537522-13539699 25 8.7
>03_02_0048 -
5265595-5265783,5265882-5265992,5266259-5266547,
5266647-5266903,5266995-5267356,5267447-5267522,
5267618-5267707,5267800-5267891,5267995-5268098,
5268191-5268253,5268609-5268736
Length = 586
Score = 28.7 bits (61), Expect = 0.70
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 52 RGKSFAFVHGKSG*NMQKERTFGALSGVDEREKNDFK 162
+GK AF+HG G QKER + + ++EK+D K
Sbjct: 214 KGK-LAFLHGGGGQKAQKERAAALAAILAKKEKDDSK 249
>01_01_0826 +
6431621-6431917,6432356-6432505,6432614-6432796,
6433305-6433385,6433548-6433586,6433646-6433849,
6433933-6434073,6434270-6434437,6434498-6434518
Length = 427
Score = 27.1 bits (57), Expect = 2.1
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = +2
Query: 5 NYIIAGFSLFLLVVTFAVKALLSYTASLAEICRRSEPLVLSPGSMKEKKMISNENILANL 184
N +A L VVT K L + E +R L++ PG + + +S+ +L +L
Sbjct: 277 NVTVASVEDKLQVVTRRHKFNLIADIMVEEAAKREFDLIVMPGGLPGAQKLSSTKVLVDL 336
Query: 185 LR 190
L+
Sbjct: 337 LK 338
>07_03_0443 + 18275397-18276355,18276394-18276931
Length = 498
Score = 26.6 bits (56), Expect = 2.8
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +2
Query: 11 IIAGFSLFLLVVTFAVKALLSYTASLAEICRRSEPLVLSPGSMKEKKMIS 160
++AG +++TF ++ L + A+LA + + P + SP E + I+
Sbjct: 288 LVAGHDTSAVLLTFMLRHLANDPATLAAMAQGKNPTLPSPDEHSEHEEIA 337
>03_06_0765 + 36104604-36105689
Length = 361
Score = 26.6 bits (56), Expect = 2.8
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -3
Query: 167 FRLKSFFSLSSTPERAPKVRSFCIFQPDLPCTK 69
FR L++T P++ C F+PD CT+
Sbjct: 279 FRSVEHRVLATTAAAEPRLSVACFFRPDYACTR 311
>12_02_0455 -
19203028-19203186,19203485-19203859,19203981-19204090,
19204200-19204243,19204435-19204635,19204937-19205079,
19205194-19205487,19205956-19206003
Length = 457
Score = 25.8 bits (54), Expect = 5.0
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 2 KNYIIAGFSLFLLVVTFAV 58
K YI+ GF LF+ +V AV
Sbjct: 428 KTYILLGFMLFMFIVAVAV 446
>09_04_0232 -
15882589-15882720,15882799-15882889,15882987-15883087,
15883494-15883592,15883693-15883830,15883918-15884508,
15884819-15884989,15885068-15885203,15885561-15885592,
15886280-15886336,15886434-15886686,15886762-15886850,
15887181-15887234,15887498-15887689,15887777-15887938
Length = 765
Score = 25.8 bits (54), Expect = 5.0
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -3
Query: 74 TKAKLLPRKLRPIRTERTQQLY 9
+KAKL P +RPI R QQ++
Sbjct: 484 SKAKLKPATMRPIPHSRKQQMH 505
>01_06_0810 - 32141657-32142105,32142986-32143034,32144961-32145110
Length = 215
Score = 25.8 bits (54), Expect = 5.0
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +2
Query: 95 ICRRSEPLVLSPGSMKEKKMI 157
+CR+++P +L G +KE M+
Sbjct: 75 VCRKNKPELLKDGDLKESAMV 95
>11_01_0261 -
1989988-1990090,1990232-1990368,1990483-1990589,
1990708-1990786,1990952-1991038,1991688-1991966,
1992109-1992822
Length = 501
Score = 25.4 bits (53), Expect = 6.5
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 11 IIAGFSLFLLVVTFAVKALLSYTASLAEI 97
++AG+ +++T AVK L A+LAE+
Sbjct: 302 LVAGYETTSMLMTLAVKFLTETPAALAEL 330
>09_04_0290 -
16429495-16429559,16430040-16430316,16430410-16430571,
16431308-16431926,16431976-16432172
Length = 439
Score = 25.4 bits (53), Expect = 6.5
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 143 EKKMISNENILANLLRVKRSISYXTIMF 226
+K ++SNE+ L+ LL+ KR+ I+F
Sbjct: 390 DKCLMSNEDALSELLKYKRASPQAQILF 417
>12_01_0259 -
1905291-1905393,1905536-1905672,1905787-1905893,
1906012-1906090,1906256-1906342,1906987-1907265,
1907401-1908114
Length = 501
Score = 25.0 bits (52), Expect = 8.7
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 11 IIAGFSLFLLVVTFAVKALLSYTASLAEI 97
++AG+ +++T AVK L A+LAE+
Sbjct: 302 LVAGYETTSVLMTLAVKFLTETPAALAEL 330
>11_06_0656 +
25926192-25926289,25927530-25927659,25928248-25928294,
25929274-25929388,25929504-25929753,25930079-25930239,
25930372-25930567,25930672-25930836,25930918-25931070,
25931160-25931248,25931385-25931423,25931460-25931681,
25933503-25934165
Length = 775
Score = 25.0 bits (52), Expect = 8.7
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = -2
Query: 114 GSLLLHISARLAVYESKAFTAKVTTNKNRENP 19
G + H+ LAV +++ T NK+ E P
Sbjct: 501 GDIHFHLPGELAVEDTEKHAVAATVNKSLEKP 532
>08_02_1290 - 25927667-25928950
Length = 427
Score = 25.0 bits (52), Expect = 8.7
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +2
Query: 74 YTASLAEICRRSEPLVLSPGSMKEKKMISNE 166
+++SL S+PL+L+P + K +I +E
Sbjct: 16 WSSSLLSAAASSQPLLLNPAYARSKSVIHDE 46
>08_01_0746 - 6959210-6959344,6959467-6959776,6960102-6960589
Length = 310
Score = 25.0 bits (52), Expect = 8.7
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -3
Query: 131 PERAPKVRSFCIFQPDLPCT 72
P + PK S +++P LPC+
Sbjct: 142 PNQKPKAPSMALWKPGLPCS 161
>05_07_0010 -
27024013-27024171,27024286-27024699,27025389-27025445,
27025544-27025637,27025775-27025868,27025949-27026117,
27026450-27026554,27026665-27026784,27027190-27027735
Length = 585
Score = 25.0 bits (52), Expect = 8.7
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +2
Query: 137 MKEKKMISNENILANLLRVKRSISYXTIMFANDMREQFKTMIKSM 271
+K KK + N+LA++LRV+R + + N+ ++ + KS+
Sbjct: 535 IKPKKGSARRNLLASVLRVQRKV----VRTINESMDELSSQSKSI 575
>05_05_0094 +
22343593-22343865,22345246-22345323,22345435-22345533,
22345830-22345925,22345968-22346150
Length = 242
Score = 25.0 bits (52), Expect = 8.7
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -3
Query: 68 AKLLPRKLRPIRTERTQQLYSS 3
+KLLP + P+ TER Q + S
Sbjct: 219 SKLLPLPIHPVETERKQNMRMS 240
>01_03_0182 + 13537522-13539699
Length = 725
Score = 25.0 bits (52), Expect = 8.7
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = -3
Query: 191 RVANWLVCFRLKSFFSLSSTPERAPK 114
R NWL CF F S PE P+
Sbjct: 409 RKYNWLACFSWYLFSSRIGWPENRPR 434
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,621,461
Number of Sequences: 37544
Number of extensions: 108600
Number of successful extensions: 285
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 285
length of database: 14,793,348
effective HSP length: 69
effective length of database: 12,202,812
effective search space used: 268461864
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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