Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21m05
         (580 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC033537-1|AAH33537.1|  419|Homo sapiens KIAA1576 protein protein.     30   5.1  
AB046796-1|BAB13402.1|  448|Homo sapiens KIAA1576 protein protein.     30   5.1  
BC039741-1|AAH39741.1|  274|Homo sapiens TMEM106B protein protein.     29   9.0  
BC033901-1|AAH33901.1|  274|Homo sapiens transmembrane protein 1...    29   9.0  
BC028108-1|AAH28108.1|  314|Homo sapiens TMEM106B protein protein.     29   9.0  
AK223263-1|BAD96983.1|  274|Homo sapiens hypothetical protein FL...    29   9.0  
AK002135-1|BAA92099.1|  274|Homo sapiens protein ( Homo sapiens ...    29   9.0  
AC007321-1|AAQ96840.1|  274|Homo sapiens unknown protein.              29   9.0  

>BC033537-1|AAH33537.1|  419|Homo sapiens KIAA1576 protein protein.
          Length = 419

 Score = 30.3 bits (65), Expect = 5.1
 Identities = 14/32 (43%), Positives = 23/32 (71%)
 Frame = +2

Query: 323 FSKNIYEVEKLILLSRVEKNYIIAGFSLFLLV 418
           F+K+ ++VEK+  +   E+N +IAGFSL  L+
Sbjct: 291 FAKSWWQVEKVNPIKLYEENKVIAGFSLLNLL 322


>AB046796-1|BAB13402.1|  448|Homo sapiens KIAA1576 protein protein.
          Length = 448

 Score = 30.3 bits (65), Expect = 5.1
 Identities = 14/32 (43%), Positives = 23/32 (71%)
 Frame = +2

Query: 323 FSKNIYEVEKLILLSRVEKNYIIAGFSLFLLV 418
           F+K+ ++VEK+  +   E+N +IAGFSL  L+
Sbjct: 320 FAKSWWQVEKVNPIKLYEENKVIAGFSLLNLL 351


>BC039741-1|AAH39741.1|  274|Homo sapiens TMEM106B protein protein.
          Length = 274

 Score = 29.5 bits (63), Expect = 9.0
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -1

Query: 340 VNVFRKYQPYDVLKRNVHAMVDDSSKISENSYYVV 236
           + V   Y  YDV KR ++  + ++  I+ N+YY V
Sbjct: 126 IGVKSAYVSYDVQKRTIYLNITNTLNITNNNYYSV 160


>BC033901-1|AAH33901.1|  274|Homo sapiens transmembrane protein 106B
           protein.
          Length = 274

 Score = 29.5 bits (63), Expect = 9.0
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -1

Query: 340 VNVFRKYQPYDVLKRNVHAMVDDSSKISENSYYVV 236
           + V   Y  YDV KR ++  + ++  I+ N+YY V
Sbjct: 126 IGVKSAYVSYDVQKRTIYLNITNTLNITNNNYYSV 160


>BC028108-1|AAH28108.1|  314|Homo sapiens TMEM106B protein protein.
          Length = 314

 Score = 29.5 bits (63), Expect = 9.0
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -1

Query: 340 VNVFRKYQPYDVLKRNVHAMVDDSSKISENSYYVV 236
           + V   Y  YDV KR ++  + ++  I+ N+YY V
Sbjct: 166 IGVKSAYVSYDVQKRTIYLNITNTLNITNNNYYSV 200


>AK223263-1|BAD96983.1|  274|Homo sapiens hypothetical protein
           FLJ11273 variant protein.
          Length = 274

 Score = 29.5 bits (63), Expect = 9.0
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -1

Query: 340 VNVFRKYQPYDVLKRNVHAMVDDSSKISENSYYVV 236
           + V   Y  YDV KR ++  + ++  I+ N+YY V
Sbjct: 126 IGVKSAYVSYDVQKRTIYLNITNTLNITNNNYYSV 160


>AK002135-1|BAA92099.1|  274|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11273 fis, clone PLACE1009338. ).
          Length = 274

 Score = 29.5 bits (63), Expect = 9.0
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -1

Query: 340 VNVFRKYQPYDVLKRNVHAMVDDSSKISENSYYVV 236
           + V   Y  YDV KR ++  + ++  I+ N+YY V
Sbjct: 126 IGVKSAYVSYDVQKRTIYLNITNTLNITNNNYYSV 160


>AC007321-1|AAQ96840.1|  274|Homo sapiens unknown protein.
          Length = 274

 Score = 29.5 bits (63), Expect = 9.0
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -1

Query: 340 VNVFRKYQPYDVLKRNVHAMVDDSSKISENSYYVV 236
           + V   Y  YDV KR ++  + ++  I+ N+YY V
Sbjct: 126 IGVKSAYVSYDVQKRTIYLNITNTLNITNNNYYSV 160


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,616,037
Number of Sequences: 237096
Number of extensions: 1428421
Number of successful extensions: 5778
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5778
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5985693436
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)