Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte21l09
(437 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1074 + 34318685-34319314,34319429-34319546,34319662-343198... 41 5e-04
05_05_0315 - 24030695-24030787,24030896-24030995,24031120-240312... 40 7e-04
03_06_0235 + 32539025-32539886,32540330-32540473,32540595-325407... 39 0.002
05_01_0206 + 1487034-1489430 31 0.53
09_02_0362 + 7860088-7860197,7861606-7861636,7861738-7861801,786... 30 0.71
07_03_0947 - 22805419-22805571,22805736-22805966,22806161-228063... 29 1.6
02_04_0547 - 23786224-23786718 28 2.9
03_05_0524 - 25181432-25181483,25181565-25181691,25181776-251818... 27 5.0
03_02_0831 + 11620831-11620883,11621002-11621106,11621399-11621873 27 5.0
12_01_0324 - 2467104-2468633 27 6.6
11_06_0594 + 25349612-25352530 27 6.6
06_03_1163 + 28100248-28100625 27 6.6
06_01_0563 - 3988706-3988857,3988972-3989056 27 6.6
05_07_0229 - 28537784-28538296 27 6.6
02_01_0763 - 5665010-5665202,5665285-5665375,5665460-5666245,566... 27 6.6
12_01_0243 + 1816725-1816883,1816992-1817114,1817227-1817313,181... 27 8.7
12_01_0217 + 1647319-1648327,1648462-1648577,1648650-1648817,164... 27 8.7
11_01_0216 + 1693889-1694897,1695034-1695149,1695222-1695389,169... 27 8.7
08_02_1569 - 27924930-27925034,27925149-27925167,27925271-279254... 27 8.7
01_06_1016 + 33830751-33831387,33831470-33831527,33831620-338317... 27 8.7
>01_06_1074 +
34318685-34319314,34319429-34319546,34319662-34319814,
34319906-34320021,34320135-34320302,34320424-34320551,
34320645-34320744,34320866-34320958
Length = 501
Score = 40.7 bits (91), Expect = 5e-04
Identities = 24/77 (31%), Positives = 37/77 (48%)
Frame = +1
Query: 202 KSARAMTQATDPLEKLRLLCLSRGASGILGLGRIFRRMDDDGSKLLNKEEFLYGIKETGL 381
K RAM Q ++ CLS I GL +F+ MD D S + +E G+ + G
Sbjct: 325 KQFRAMNQFKKAALRVIAGCLSE--EEIRGLKEMFKSMDSDNSGTITVDELRKGLSKQGT 382
Query: 382 ELNKSEAEELFSQFDTD 432
+L ++E ++L D D
Sbjct: 383 KLTEAEVQQLMEAADAD 399
>05_05_0315 -
24030695-24030787,24030896-24030995,24031120-24031247,
24031350-24031517,24031626-24031741,24031773-24031896,
24032085-24032254,24032255-24032999
Length = 547
Score = 40.3 bits (90), Expect = 7e-04
Identities = 24/77 (31%), Positives = 37/77 (48%)
Frame = +1
Query: 202 KSARAMTQATDPLEKLRLLCLSRGASGILGLGRIFRRMDDDGSKLLNKEEFLYGIKETGL 381
K RAM Q ++ CLS I GL +F+ MD D S + +E G+ + G
Sbjct: 371 KQFRAMNQFKKAALRVIAGCLSE--EEIRGLKEMFKSMDSDNSGTITVDELRKGLAKKGT 428
Query: 382 ELNKSEAEELFSQFDTD 432
+L ++E ++L D D
Sbjct: 429 KLTEAEVQQLMEAADAD 445
>03_06_0235 +
32539025-32539886,32540330-32540473,32540595-32540747,
32540871-32540986,32541254-32541421,32541534-32541758,
32541884-32542015
Length = 599
Score = 38.7 bits (86), Expect = 0.002
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +1
Query: 226 ATDPLEKLRLLCLSRGASG--ILGLGRIFRRMDDDGSKLLNKEEFLYGIKETGLELNKSE 399
A + L+K+ L ++ S I GL +F+ +D D S + EE G+K+ G L +SE
Sbjct: 415 AMNKLKKMALRVIAENLSEDEIAGLKEMFKMIDTDNSGQITFEELKVGLKKVGANLQESE 474
Query: 400 AEELFSQFDTDS 435
L D D+
Sbjct: 475 IYALMQAADVDN 486
>05_01_0206 + 1487034-1489430
Length = 798
Score = 30.7 bits (66), Expect = 0.53
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -1
Query: 296 PSPKIPEAPRDKQSKRSFSRGSVACVIARALFCIS 192
PSP+ P P S+R S+G +A + A+ C +
Sbjct: 339 PSPRTPSPPATPSSRRGVSKGWIAFAVVGAVGCFA 373
>09_02_0362 +
7860088-7860197,7861606-7861636,7861738-7861801,
7861922-7862052,7863575-7863784,7863891-7863956,
7864868-7865075,7866270-7866325,7866406-7867128,
7868246-7868299,7868667-7868695,7869501-7869585,
7870032-7870202,7870246-7870827
Length = 839
Score = 30.3 bits (65), Expect = 0.71
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = -1
Query: 203 FCISSSSWTEPADIGLCHATELSISAFTFGEFS*LKQAAIEALLIL 66
FC+ S WT+ ++ L + +S S F E + + + EAL+IL
Sbjct: 70 FCVQRSGWTKDMNVFLSWLSGISFSGGGFSEAA-ISEGLAEALMIL 114
>07_03_0947 -
22805419-22805571,22805736-22805966,22806161-22806328,
22806425-22806540,22806853-22807005,22807241-22807384,
22807584-22807707,22808126-22808689
Length = 550
Score = 29.1 bits (62), Expect = 1.6
Identities = 13/62 (20%), Positives = 30/62 (48%)
Frame = +1
Query: 247 LRLLCLSRGASGILGLGRIFRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFD 426
LR++ + G+ +F +MD + ++N +E G+ + G ++ ++ + L D
Sbjct: 366 LRVIAEHLSVEEVAGIKDMFEKMDLNKDNMINFDELKLGLHKLGHQMADADVQILMDAAD 425
Query: 427 TD 432
D
Sbjct: 426 VD 427
>02_04_0547 - 23786224-23786718
Length = 164
Score = 28.3 bits (60), Expect = 2.9
Identities = 11/47 (23%), Positives = 23/47 (48%)
Frame = +1
Query: 292 LGRIFRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTD 432
L R+F D DG + +EE ++ G+ +++ E ++ D +
Sbjct: 9 LRRVFELFDRDGDGRITREELTESLERLGMPVHREELAATIARIDAN 55
>03_05_0524 -
25181432-25181483,25181565-25181691,25181776-25181826,
25182159-25182314,25182405-25182905,25182999-25183713,
25183797-25183867,25183974-25184103,25185706-25186167
Length = 754
Score = 27.5 bits (58), Expect = 5.0
Identities = 17/65 (26%), Positives = 30/65 (46%)
Frame = +1
Query: 106 ENSPKVKAEMESSVAWHRPMSAGSVQEEELMQKSARAMTQATDPLEKLRLLCLSRGASGI 285
EN+ K AE +SS +AGS+ + +A+A AT+ + ++ + +
Sbjct: 477 ENAKKAAAEAQSSAEAAASAAAGSLATAQAASGAAQAAQAATEEVVTVQANAAEQAVLFV 536
Query: 286 LGLGR 300
LGR
Sbjct: 537 EALGR 541
>03_02_0831 + 11620831-11620883,11621002-11621106,11621399-11621873
Length = 210
Score = 27.5 bits (58), Expect = 5.0
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -2
Query: 346 LCSVVYFHHHPCDGKFFQVPRSLKHLGTSKASAVS 242
L SV Y++ H C+ F + S L T+ AVS
Sbjct: 82 LYSVTYYNEHTCNSAFLPLSPSEFQLQTASGKAVS 116
>12_01_0324 - 2467104-2468633
Length = 509
Score = 27.1 bits (57), Expect = 6.6
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = +2
Query: 161 RCLLVPSRRKS*CKRVLVL*HKLLILWRNCACFACPEVLQGSWDLE 298
RC S C L + LL W C C C L GSW E
Sbjct: 10 RCAAAAFFVSSLCVAALGVVLLLLRRWPWCGCHVCRAYLAGSWRRE 55
>11_06_0594 + 25349612-25352530
Length = 972
Score = 27.1 bits (57), Expect = 6.6
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +1
Query: 160 PMSAGSVQEEELMQKSARAMTQATDPLEKLRLLCLSRGASGILGL 294
P ++ E+E S M Q + KL +LC + +SG+ GL
Sbjct: 701 PSKKNNLMEKESCSFSTVLMPQKIVRMGKLEILCYAEVSSGLTGL 745
>06_03_1163 + 28100248-28100625
Length = 125
Score = 27.1 bits (57), Expect = 6.6
Identities = 22/74 (29%), Positives = 33/74 (44%)
Frame = +1
Query: 133 MESSVAWHRPMSAGSVQEEELMQKSARAMTQATDPLEKLRLLCLSRGASGILGLGRIFRR 312
M+ + P+ A + EE LMQ+ A DP L R + +LGLG +
Sbjct: 12 MQEGFEDYLPVMAERLGEEGLMQELASGFRLLMDPASGLITFDSLRRNAPLLGLGGM--- 68
Query: 313 MDDDGSKLLNKEEF 354
DDD +L + +F
Sbjct: 69 SDDDLRGMLAEGDF 82
>06_01_0563 - 3988706-3988857,3988972-3989056
Length = 78
Score = 27.1 bits (57), Expect = 6.6
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +1
Query: 139 SSVAWHRPMSAGS--VQEEELMQKSARAMTQATDP 237
S+ +W RP++AGS V E+L+ + R++ T P
Sbjct: 20 SACSWSRPLAAGSDGVGGEKLVSAARRSLGSRTPP 54
>05_07_0229 - 28537784-28538296
Length = 170
Score = 27.1 bits (57), Expect = 6.6
Identities = 22/87 (25%), Positives = 35/87 (40%)
Frame = +1
Query: 172 GSVQEEELMQKSARAMTQATDPLEKLRLLCLSRGASGILGLGRIFRRMDDDGSKLLNKEE 351
GSV+ +EL A +T T +++ +LL +FR D DG+ ++ E
Sbjct: 72 GSVEFDELAAAIAPVLTTQTHLVDQAQLL-------------EVFRAFDRDGNGFISAAE 118
Query: 352 FLYGIKETGLELNKSEAEELFSQFDTD 432
+ G L E + DTD
Sbjct: 119 LARSMARLGQPLTFEELTRMMRDADTD 145
>02_01_0763 -
5665010-5665202,5665285-5665375,5665460-5666245,
5667745-5668225
Length = 516
Score = 27.1 bits (57), Expect = 6.6
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +1
Query: 286 LGLGRIFRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDS 435
L L RIF+ +D + + + EE + + + G+E++ E D D+
Sbjct: 131 LELYRIFQAIDVEHNGCILPEELWHALVKAGIEIDDEELARFVEHVDKDN 180
>12_01_0243 +
1816725-1816883,1816992-1817114,1817227-1817313,
1817442-1817546,1817744-1817905,1818473-1818508,
1818637-1818708,1819285-1819562,1820275-1820509
Length = 418
Score = 26.6 bits (56), Expect = 8.7
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +1
Query: 124 KAEMESSVAWHRPMSAGSVQEEELMQKSARA 216
K ES+ AWH+ S + ++E+ ++ ARA
Sbjct: 367 KMIQESNSAWHKDGSRSAQEDEDAEEEKARA 397
>12_01_0217 +
1647319-1648327,1648462-1648577,1648650-1648817,
1648911-1649038,1649121-1649220,1649329-1649433
Length = 541
Score = 26.6 bits (56), Expect = 8.7
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +1
Query: 304 FRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDS 435
F+ D D S + KEE +KE GL + +E +++ + D+++
Sbjct: 465 FQYFDKDNSGYITKEELEQALKEQGL-YDANEIKDVITDADSNN 507
>11_01_0216 +
1693889-1694897,1695034-1695149,1695222-1695389,
1695482-1695609,1695692-1695791,1696124-1696168
Length = 521
Score = 26.6 bits (56), Expect = 8.7
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +1
Query: 304 FRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDS 435
F+ D D S + KEE +KE GL + +E +++ + D+++
Sbjct: 465 FQYFDKDNSGYITKEELEQALKEQGL-YDANEIKDVITDADSNN 507
>08_02_1569 -
27924930-27925034,27925149-27925167,27925271-27925490,
27925925-27925971,27926502-27927025
Length = 304
Score = 26.6 bits (56), Expect = 8.7
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +1
Query: 271 GASGILG--LGRIFRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFD 426
G +LG + IF R D DGS + K+E ++ G + S E L + ++
Sbjct: 195 GLISVLGGNIQGIFDRYDRDGSGKIEKDELREALRSLGYAVPPSVLELLIANYN 248
>01_06_1016 +
33830751-33831387,33831470-33831527,33831620-33831703,
33831819-33831954,33833191-33833451
Length = 391
Score = 26.6 bits (56), Expect = 8.7
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = -2
Query: 304 KFFQVPRSLKHLGTSKASAVSPEDQ*LVS*HEHSFASALPPGRNQQTSVCATQLS 140
K +P SL + + A SPE + AS LPP S AT++S
Sbjct: 42 KSLSMPASLDNAAAATTCAASPEKSRAADFARAAAASLLPPPTPASVSAKATRVS 96
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,910,898
Number of Sequences: 37544
Number of extensions: 216040
Number of successful extensions: 648
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 648
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 823860276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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