Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte21l01
(657 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 27 0.16
AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein. 24 1.5
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 23 1.9
X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 23 2.6
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 22 4.5
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 22 4.5
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 22 4.5
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 22 4.5
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 4.5
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 22 4.5
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 22 5.9
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 27.1 bits (57), Expect = 0.16
Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Frame = +3
Query: 27 INEWKGFFQ-SSKFSVIN*EKMVLSAKNQSNLRESAKASSKKEVIVVHS----EKIEYSN 191
++ W F + SS+ + + V +RE+ S K + +V++ E +E
Sbjct: 243 VHRWYKFIEGSSRRQPVQLNERVRQVSGTLIIREARVEDSGKYLCIVNNSVGGESVETVL 302
Query: 192 GLNSTLKAELEEEVDIIDLGAP 257
+ + L AE+E ID G P
Sbjct: 303 TVTAPLGAEIEPSTQTIDFGRP 324
>AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein.
Length = 147
Score = 23.8 bits (49), Expect = 1.5
Identities = 13/52 (25%), Positives = 26/52 (50%)
Frame = +3
Query: 123 ESAKASSKKEVIVVHSEKIEYSNGLNSTLKAELEEEVDIIDLGAPRGIRSVP 278
E K ++ ++ ++ + K++ + +K + EEVD + G I SVP
Sbjct: 7 EKCKITANRQQVMRQNMKLK-RHLAQDKVKVRVAEEVDPLPFGVENTISSVP 57
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 23.4 bits (48), Expect = 1.9
Identities = 13/50 (26%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = -2
Query: 218 FSFQCTV*TITVFDLFRMHNYDFLLRRRLGRFTKIRLIFCTEHH--FFLV 75
F + C ++ FDL + RR G F+ +++ F + H +FL+
Sbjct: 200 FGYLCPGMALSQFDLMGSPYRNLTFVRREGEFSVLQVSFNLQRHTGYFLI 249
>X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor
protein.
Length = 168
Score = 23.0 bits (47), Expect = 2.6
Identities = 13/54 (24%), Positives = 24/54 (44%)
Frame = +3
Query: 255 PRGIRSVPPERVSSKPARVASTYTPNPRLYPGPQAKFKKVKRDRATETKPAEPK 416
PR R E +++P + P+PRL P+A+ + + +P P+
Sbjct: 114 PRLRREPEAEPGNNRPVYIPQPRPPHPRLRREPEAEPGNNRPVYIPQPRPPHPR 167
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.5
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3
Query: 282 ERVSSKPARVASTYTPNPRLYPGPQAKFKKVKRDRATETKPAEPK 416
+R S R +Y N R Y + + K+ RDR + EPK
Sbjct: 37 KRYSRSREREQKSYK-NERKYRKYRERSKERSRDRTERERSREPK 80
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 22.2 bits (45), Expect = 4.5
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3
Query: 282 ERVSSKPARVASTYTPNPRLYPGPQAKFKKVKRDRATETKPAEPK 416
+R S R +Y N R Y + + K+ RDR + EPK
Sbjct: 37 KRYSRSREREQKSYK-NERKYRKYRERSKERSRDRTERERSREPK 80
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 22.2 bits (45), Expect = 4.5
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +3
Query: 282 ERVSSKPARVASTYTPNPRLYPGPQAKFKKVKRDRATETKPAEPK 416
+R S R ++Y N R Y + + K+ RDR + EPK
Sbjct: 270 KRYSRSREREQNSYK-NEREYRKYRERSKERSRDRTERERSREPK 313
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 22.2 bits (45), Expect = 4.5
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +3
Query: 144 KKEVIVVHSE--KIEYSNGLNSTLKAELEEE 230
KKEV + + K E S G+N + E EEE
Sbjct: 293 KKEVEDMEYDDIKTELSTGMNDDIPPETEEE 323
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 22.2 bits (45), Expect = 4.5
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +3
Query: 387 ATETKPAEPKETQQSKRKRFFRRPVPNARLY 479
+TET P+ + +RFF+ P A +Y
Sbjct: 535 STETPPSYNQLNYNENIERFFKSKPPVATMY 565
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 22.2 bits (45), Expect = 4.5
Identities = 11/44 (25%), Positives = 20/44 (45%)
Frame = +3
Query: 372 VKRDRATETKPAEPKETQQSKRKRFFRRPVPNARLYRPGPPPPK 503
+ RD ++ +P T +S+ +RFF +Y P P+
Sbjct: 482 ITRDISSLVVQEQPTPTTESEERRFFSFHQWGILVYEPSACRPR 525
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 5.9
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +3
Query: 282 ERVSSKPARVASTYTPNPRLYPGPQAKFKKVKRDRATETKPAEPK 416
+R S R ++Y N R Y + K+ RDRA + EPK
Sbjct: 36 KRNSRSREREQNSYK-NEREYRKYRETSKERSRDRAERERSREPK 79
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,110
Number of Sequences: 438
Number of extensions: 3507
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19734030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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