Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte21k19
(484 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D88152-1|BAA20072.1| 549|Homo sapiens acetyl-coenzyme A transpo... 129 6e-30
BC014416-1|AAH14416.1| 549|Homo sapiens SLC33A1 protein protein. 129 6e-30
BC011982-1|AAH11982.1| 412|Homo sapiens major facilitator super... 48 2e-05
AF026247-2|AAC52078.1| 75|Homo sapiens HERV-E envelope glycopr... 30 3.7
AF026246-2|AAC52076.1| 75|Homo sapiens HERV-E envelope glycopr... 30 3.7
BC131536-1|AAI31537.1| 1631|Homo sapiens IQ motif containing GTP... 29 6.5
AY253300-1|AAP06954.1| 1631|Homo sapiens IQGAP3 protein. 29 6.5
AL365181-1|CAI13046.1| 1631|Homo sapiens IQ motif containing GTP... 29 6.5
AK122653-1|BAC85501.1| 1023|Homo sapiens protein. 29 6.5
AB105103-1|BAC78211.1| 1631|Homo sapiens IQGAP3 protein. 29 6.5
>D88152-1|BAA20072.1| 549|Homo sapiens acetyl-coenzyme A
transporter protein.
Length = 549
Score = 129 bits (311), Expect = 6e-30
Identities = 55/86 (63%), Positives = 72/86 (83%)
Frame = +2
Query: 218 NIAVLLFLYTLQGIPLGLAGAVPMLLQNKGITYTQQAEFSLVNWPFSVKLLWAPIVDAMF 397
+I +LLFLY LQGIPLGLAG++P++LQ+K ++YT QA FS V WPFS+KLLWAP+VDA++
Sbjct: 74 SILLLLFLYVLQGIPLGLAGSIPLILQSKNVSYTDQAFFSFVFWPFSLKLLWAPLVDAVY 133
Query: 398 WPEFGRRKTWLVPVQYLIGIVMIIXS 475
FGRRK+WLVP QY++G+ MI S
Sbjct: 134 VKNFGRRKSWLVPTQYILGLFMIYLS 159
>BC014416-1|AAH14416.1| 549|Homo sapiens SLC33A1 protein protein.
Length = 549
Score = 129 bits (311), Expect = 6e-30
Identities = 55/86 (63%), Positives = 72/86 (83%)
Frame = +2
Query: 218 NIAVLLFLYTLQGIPLGLAGAVPMLLQNKGITYTQQAEFSLVNWPFSVKLLWAPIVDAMF 397
+I +LLFLY LQGIPLGLAG++P++LQ+K ++YT QA FS V WPFS+KLLWAP+VDA++
Sbjct: 74 SILLLLFLYVLQGIPLGLAGSIPLILQSKNVSYTDQAFFSFVFWPFSLKLLWAPLVDAVY 133
Query: 398 WPEFGRRKTWLVPVQYLIGIVMIIXS 475
FGRRK+WLVP QY++G+ MI S
Sbjct: 134 VKNFGRRKSWLVPTQYILGLFMIYLS 159
>BC011982-1|AAH11982.1| 412|Homo sapiens major facilitator
superfamily domain containing 3 protein.
Length = 412
Score = 47.6 bits (108), Expect = 2e-05
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +2
Query: 239 LYTLQGIPLGL-AGAVPMLLQNKGITYTQQAEFSLVNWPFSVKLLWAPIVDAMFWPEFGR 415
LY +QG+P GL +G +P+LL+ G++ T+ ++ P+ +KL WAP+VDA G
Sbjct: 11 LYLVQGLPYGLQSGLLPVLLRAGGLSLTRVGLAKVLYAPWLLKLAWAPLVDAQ-----GS 65
Query: 416 RKTWLVPVQYLIGIV 460
+ W+ +G+V
Sbjct: 66 ARAWVTRSTAGLGLV 80
>AF026247-2|AAC52078.1| 75|Homo sapiens HERV-E envelope
glycoprotein protein.
Length = 75
Score = 30.3 bits (65), Expect = 3.7
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -3
Query: 317 CTLCLYFVKALGQ-LQLIPVVYPVMCIGTTKQLCL 216
C+ C++ V +GQ ++ I + Y C+GT K+ CL
Sbjct: 25 CSQCIHQVTEVGQQIKTIFLFYSYECMGTLKETCL 59
>AF026246-2|AAC52076.1| 75|Homo sapiens HERV-E envelope
glycoprotein protein.
Length = 75
Score = 30.3 bits (65), Expect = 3.7
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -3
Query: 317 CTLCLYFVKALGQ-LQLIPVVYPVMCIGTTKQLCL 216
C+ C++ V +GQ ++ I + Y C+GT K+ CL
Sbjct: 25 CSQCIHQVTEVGQQIKTIFLFYSYECMGTLKETCL 59
>BC131536-1|AAI31537.1| 1631|Homo sapiens IQ motif containing GTPase
activating protein 3 protein.
Length = 1631
Score = 29.5 bits (63), Expect = 6.5
Identities = 23/79 (29%), Positives = 36/79 (45%)
Frame = +2
Query: 122 LTKRKNSPENEELIENGDAPNEGRSNIKGDELNIAVLLFLYTLQGIPLGLAGAVPMLLQN 301
LTKR ++ ++ + + S K +L LF Y LQ P+ LA + + QN
Sbjct: 922 LTKRNKEQLSDMMVLDKQKGLKSLSKEKRQKLEAYQHLF-YLLQTQPIYLAKLIFQMPQN 980
Query: 302 KGITYTQQAEFSLVNWPFS 358
K + + FSL N+ S
Sbjct: 981 KTTKFMEAVIFSLYNYASS 999
>AY253300-1|AAP06954.1| 1631|Homo sapiens IQGAP3 protein.
Length = 1631
Score = 29.5 bits (63), Expect = 6.5
Identities = 23/79 (29%), Positives = 36/79 (45%)
Frame = +2
Query: 122 LTKRKNSPENEELIENGDAPNEGRSNIKGDELNIAVLLFLYTLQGIPLGLAGAVPMLLQN 301
LTKR ++ ++ + + S K +L LF Y LQ P+ LA + + QN
Sbjct: 922 LTKRNKEQLSDMMVLDKQKGLKSLSKEKRQKLEAYQHLF-YLLQTQPIYLAKLIFQMPQN 980
Query: 302 KGITYTQQAEFSLVNWPFS 358
K + + FSL N+ S
Sbjct: 981 KTTKFMEAVIFSLYNYASS 999
>AL365181-1|CAI13046.1| 1631|Homo sapiens IQ motif containing GTPase
activating protein 3 protein.
Length = 1631
Score = 29.5 bits (63), Expect = 6.5
Identities = 23/79 (29%), Positives = 36/79 (45%)
Frame = +2
Query: 122 LTKRKNSPENEELIENGDAPNEGRSNIKGDELNIAVLLFLYTLQGIPLGLAGAVPMLLQN 301
LTKR ++ ++ + + S K +L LF Y LQ P+ LA + + QN
Sbjct: 922 LTKRNKEQLSDMMVLDKQKGLKSLSKEKRQKLEAYQHLF-YLLQTQPIYLAKLIFQMPQN 980
Query: 302 KGITYTQQAEFSLVNWPFS 358
K + + FSL N+ S
Sbjct: 981 KTTKFMEAVIFSLYNYASS 999
>AK122653-1|BAC85501.1| 1023|Homo sapiens protein.
Length = 1023
Score = 29.5 bits (63), Expect = 6.5
Identities = 23/79 (29%), Positives = 36/79 (45%)
Frame = +2
Query: 122 LTKRKNSPENEELIENGDAPNEGRSNIKGDELNIAVLLFLYTLQGIPLGLAGAVPMLLQN 301
LTKR ++ ++ + + S K +L LF Y LQ P+ LA + + QN
Sbjct: 314 LTKRNKEQLSDMMVLDKQKGLKSLSKEKRQKLEAYQHLF-YLLQTQPIYLAKLIFQMPQN 372
Query: 302 KGITYTQQAEFSLVNWPFS 358
K + + FSL N+ S
Sbjct: 373 KTTKFMEAVIFSLYNYASS 391
>AB105103-1|BAC78211.1| 1631|Homo sapiens IQGAP3 protein.
Length = 1631
Score = 29.5 bits (63), Expect = 6.5
Identities = 23/79 (29%), Positives = 36/79 (45%)
Frame = +2
Query: 122 LTKRKNSPENEELIENGDAPNEGRSNIKGDELNIAVLLFLYTLQGIPLGLAGAVPMLLQN 301
LTKR ++ ++ + + S K +L LF Y LQ P+ LA + + QN
Sbjct: 922 LTKRNKEQLSDMMVLDKQKGLKSLSKEKRQKLEAYQHLF-YLLQTQPIYLAKLIFQMPQN 980
Query: 302 KGITYTQQAEFSLVNWPFS 358
K + + FSL N+ S
Sbjct: 981 KTTKFMEAVIFSLYNYASS 999
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,596,664
Number of Sequences: 237096
Number of extensions: 1218255
Number of successful extensions: 1939
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1938
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4327667848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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