Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte21k19
(484 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50859-8|CAN99723.1| 549|Caenorhabditis elegans Hypothetical pr... 128 3e-30
Z50859-7|CAH04735.1| 574|Caenorhabditis elegans Hypothetical pr... 127 4e-30
Z50859-4|CAA90730.1| 538|Caenorhabditis elegans Hypothetical pr... 126 6e-30
Z50859-3|CAA90728.1| 632|Caenorhabditis elegans Hypothetical pr... 126 6e-30
AF125951-2|AAD14691.1| 643|Caenorhabditis elegans Hypothetical ... 29 2.3
AF039051-3|AAB94261.2| 347|Caenorhabditis elegans Hypothetical ... 28 3.1
Z93377-10|CAB07574.2| 321|Caenorhabditis elegans Hypothetical p... 27 5.4
Z78018-2|CAB01447.1| 434|Caenorhabditis elegans Hypothetical pr... 27 7.1
AF024500-4|AAB70365.1| 335|Caenorhabditis elegans Hypothetical ... 27 7.1
AL132948-24|CAD31826.1| 135|Caenorhabditis elegans Hypothetical... 27 9.4
>Z50859-8|CAN99723.1| 549|Caenorhabditis elegans Hypothetical
protein T26C5.3d protein.
Length = 549
Score = 128 bits (308), Expect = 3e-30
Identities = 59/124 (47%), Positives = 80/124 (64%)
Frame = +2
Query: 113 IMTLTKRKNSPENEELIENGDAPNEGRSNIKGDELNIAVLLFLYTLQGIPLGLAGAVPML 292
++ +++ E + N + +KGD +I +LLFLY LQG+PLGL GA+P+L
Sbjct: 15 LVAASRKSTLVERRNVDPNANWFKRTHDTLKGDISSILLLLFLYLLQGVPLGLIGAIPLL 74
Query: 293 LQNKGITYTQQAEFSLVNWPFSVKLLWAPIVDAMFWPEFGRRKTWLVPVQYLIGIVMIIX 472
L K ++Y QA FS WPFS+KLLWAPIVD++F GRRK+W+VP QYLIG M+
Sbjct: 75 LSGKHVSYGSQAIFSFAYWPFSLKLLWAPIVDSVFSKRLGRRKSWMVPCQYLIGAFMLYL 134
Query: 473 SYCV 484
SY V
Sbjct: 135 SYKV 138
>Z50859-7|CAH04735.1| 574|Caenorhabditis elegans Hypothetical
protein T26C5.3c protein.
Length = 574
Score = 127 bits (307), Expect = 4e-30
Identities = 60/119 (50%), Positives = 78/119 (65%)
Frame = +2
Query: 128 KRKNSPENEELIENGDAPNEGRSNIKGDELNIAVLLFLYTLQGIPLGLAGAVPMLLQNKG 307
K K + + + N + +KGD +I +LLFLY LQG+PLGL GA+P+LL K
Sbjct: 45 KEKKVVQIQNVDPNANWFKRTHDTLKGDISSILLLLFLYLLQGVPLGLIGAIPLLLSGKH 104
Query: 308 ITYTQQAEFSLVNWPFSVKLLWAPIVDAMFWPEFGRRKTWLVPVQYLIGIVMIIXSYCV 484
++Y QA FS WPFS+KLLWAPIVD++F GRRK+W+VP QYLIG M+ SY V
Sbjct: 105 VSYGSQAIFSFAYWPFSLKLLWAPIVDSVFSKRLGRRKSWMVPCQYLIGAFMLYLSYKV 163
>Z50859-4|CAA90730.1| 538|Caenorhabditis elegans Hypothetical
protein T26C5.3b protein.
Length = 538
Score = 126 bits (305), Expect = 6e-30
Identities = 57/95 (60%), Positives = 71/95 (74%)
Frame = +2
Query: 200 IKGDELNIAVLLFLYTLQGIPLGLAGAVPMLLQNKGITYTQQAEFSLVNWPFSVKLLWAP 379
+KGD +I +LLFLY LQG+PLGL GA+P+LL K ++Y QA FS WPFS+KLLWAP
Sbjct: 33 LKGDISSILLLLFLYLLQGVPLGLIGAIPLLLSGKHVSYGSQAIFSFAYWPFSLKLLWAP 92
Query: 380 IVDAMFWPEFGRRKTWLVPVQYLIGIVMIIXSYCV 484
IVD++F GRRK+W+VP QYLIG M+ SY V
Sbjct: 93 IVDSVFSKRLGRRKSWMVPCQYLIGAFMLYLSYKV 127
>Z50859-3|CAA90728.1| 632|Caenorhabditis elegans Hypothetical
protein T26C5.3a protein.
Length = 632
Score = 126 bits (305), Expect = 6e-30
Identities = 57/95 (60%), Positives = 71/95 (74%)
Frame = +2
Query: 200 IKGDELNIAVLLFLYTLQGIPLGLAGAVPMLLQNKGITYTQQAEFSLVNWPFSVKLLWAP 379
+KGD +I +LLFLY LQG+PLGL GA+P+LL K ++Y QA FS WPFS+KLLWAP
Sbjct: 127 LKGDISSILLLLFLYLLQGVPLGLIGAIPLLLSGKHVSYGSQAIFSFAYWPFSLKLLWAP 186
Query: 380 IVDAMFWPEFGRRKTWLVPVQYLIGIVMIIXSYCV 484
IVD++F GRRK+W+VP QYLIG M+ SY V
Sbjct: 187 IVDSVFSKRLGRRKSWMVPCQYLIGAFMLYLSYKV 221
>AF125951-2|AAD14691.1| 643|Caenorhabditis elegans Hypothetical
protein D2063.2 protein.
Length = 643
Score = 28.7 bits (61), Expect = 2.3
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +2
Query: 212 ELNIAVLLFLYTLQGIPLGLAGAVPMLLQNKGITYTQQAEFS--LVNWP 352
+L ++ FL+T+ L L A +L N+ +TY +S LV+WP
Sbjct: 241 QLPTNIVRFLFTILTASLMLISADDTILSNRLLTYIGDISYSLYLVHWP 289
>AF039051-3|AAB94261.2| 347|Caenorhabditis elegans Hypothetical
protein C14C6.3 protein.
Length = 347
Score = 28.3 bits (60), Expect = 3.1
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = -2
Query: 342 TKLNSACCVYVMPLFCKSI 286
TKLN+ CC++V PL +++
Sbjct: 119 TKLNTRCCIFVDPLILENV 137
>Z93377-10|CAB07574.2| 321|Caenorhabditis elegans Hypothetical
protein F13A7.2 protein.
Length = 321
Score = 27.5 bits (58), Expect = 5.4
Identities = 19/68 (27%), Positives = 33/68 (48%)
Frame = -3
Query: 344 LLN*IQLVACTLCLYFVKALGQLQLIPVVYPVMCIGTTKQLCLVHPL*CYFFLRSARLRF 165
LL ++ + T + +K G+ LI Y + +GT C++ PL +F+R A +F
Sbjct: 244 LLPMLRYIPLTAIYFMIKYTGEQFLISQ-YTITVLGTIP--CILDPLVQIYFIRDAIRKF 300
Query: 164 QSIPHFPV 141
+ PV
Sbjct: 301 LACNSSPV 308
>Z78018-2|CAB01447.1| 434|Caenorhabditis elegans Hypothetical
protein W07G4.2 protein.
Length = 434
Score = 27.1 bits (57), Expect = 7.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2
Query: 348 QFTKLNSACCVYVMP 304
QF NS CCVYV P
Sbjct: 141 QFINFNSRCCVYVEP 155
>AF024500-4|AAB70365.1| 335|Caenorhabditis elegans Hypothetical
protein K06H6.6 protein.
Length = 335
Score = 27.1 bits (57), Expect = 7.1
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -2
Query: 342 TKLNSACCVYVMPL 301
TKLN+ CCV+V PL
Sbjct: 119 TKLNTRCCVFVDPL 132
>AL132948-24|CAD31826.1| 135|Caenorhabditis elegans Hypothetical
protein Y39B6A.32 protein.
Length = 135
Score = 26.6 bits (56), Expect = 9.4
Identities = 8/20 (40%), Positives = 16/20 (80%)
Frame = +3
Query: 36 VNSTDVFFQHWHFRTFVMYF 95
+N ++FF+++HF+ FV +F
Sbjct: 94 LNFRELFFKNFHFKKFVFFF 113
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,374,053
Number of Sequences: 27780
Number of extensions: 196148
Number of successful extensions: 495
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 495
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 892829112
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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