Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21k16
         (564 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81462-1|CAB03840.1|  125|Caenorhabditis elegans Hypothetical pr...    60   1e-09
U41274-7|AAA82463.1| 1610|Caenorhabditis elegans Hypothetical pr...    33   0.14 
AL032652-8|CAA21706.1|  277|Caenorhabditis elegans Hypothetical ...    30   1.0  
Z81586-11|CAF31485.1| 1165|Caenorhabditis elegans Hypothetical p...    28   4.0  

>Z81462-1|CAB03840.1|  125|Caenorhabditis elegans Hypothetical
           protein C04H5.1 protein.
          Length = 125

 Score = 60.1 bits (139), Expect = 1e-09
 Identities = 27/77 (35%), Positives = 45/77 (58%)
 Frame = +1

Query: 208 MKLITHNMLTSKCLKGVVTGYPLAINATDIKVKEVDFNPEFISRVIPKLDWEVLWVAADS 387
           MKL  HN ++S+ LK V  GYPL +       K+++F+ +    ++ ++ +E L VAA +
Sbjct: 1   MKLFVHNFMSSRFLKNVTVGYPLNLVVKQFVEKDIEFDRDNTIVMLDRIQYEALIVAAAA 60

Query: 388 IGHSDGLPRSLENKYDE 438
           +  SD +PR    K+DE
Sbjct: 61  VNQSDRIPREKPEKWDE 77



 Score = 33.5 bits (73), Expect = 0.11
 Identities = 14/22 (63%), Positives = 15/22 (68%)
 Frame = +2

Query: 497 GHLTCPESGRQFPISKGIPNML 562
           G L CPE+   FPI  GIPNML
Sbjct: 98  GELICPETKTVFPIRDGIPNML 119


>U41274-7|AAA82463.1| 1610|Caenorhabditis elegans Hypothetical protein
            T04G9.1 protein.
          Length = 1610

 Score = 33.1 bits (72), Expect = 0.14
 Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
 Frame = +1

Query: 262  TGYPLAINATDIKV-KEVDFNPEFISRVIPKLDWEVLWVAADSIGHSDGLPRSL 420
            T Y L +    +K+ +E+D NP    ++ PK+D   L++AADS+  + G  R L
Sbjct: 1159 TEYLLLLAEVKVKLFEEIDVNPRVREQLRPKIDLIDLYMAADSMNVAKGRLRRL 1212


>AL032652-8|CAA21706.1|  277|Caenorhabditis elegans Hypothetical
           protein Y63D3A.10 protein.
          Length = 277

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 17/54 (31%), Positives = 30/54 (55%)
 Frame = +1

Query: 214 LITHNMLTSKCLKGVVTGYPLAINATDIKVKEVDFNPEFISRVIPKLDWEVLWV 375
           LI + +    C+  V+  Y ++   T +KV     NP+ + ++I KLD +VLW+
Sbjct: 94  LIAYKLDIRDCINHVLEVYKISKLHT-LKVIGAINNPQNLLKIIGKLDLKVLWI 146


>Z81586-11|CAF31485.1| 1165|Caenorhabditis elegans Hypothetical
           protein T05F1.6 protein.
          Length = 1165

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = -2

Query: 539 KSEIVFQILDKSSVPLQLPPLTRLYELSFKNSSFSSYLFSKD 414
           K ++   I+D+   P     +   Y++SF +S +  Y+ SKD
Sbjct: 815 KGKLTISIMDEDGEPTDEVKVVDWYDVSFDHSEWRDYVKSKD 856


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,436,008
Number of Sequences: 27780
Number of extensions: 245894
Number of successful extensions: 625
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 625
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)