Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte21k16
(564 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 27 0.17
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 23 1.6
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 23 2.8
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 21 6.5
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 21 6.5
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 21 6.5
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 21 8.6
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 21 8.6
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 21 8.6
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 21 8.6
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 21 8.6
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 21 8.6
AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein. 21 8.6
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 21 8.6
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 21 8.6
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 26.6 bits (56), Expect = 0.17
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 211 KLITHNMLTSKCLKGVVTGYPLAINAT 291
KL+T ++ TSK +K V + +A+NAT
Sbjct: 159 KLLTFDLKTSKLVKQVEIPHNIAVNAT 185
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 23.4 bits (48), Expect = 1.6
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 211 KLITHNMLTSKCLKGVVTGYPLAINAT 291
KL+ ++ TSK LK + + +A+NA+
Sbjct: 157 KLLAFDLNTSKLLKQIEIPHNIAVNAS 183
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 22.6 bits (46), Expect = 2.8
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 251 FKHFEVSILWVISFIIIF 198
++HF I W+ FI+IF
Sbjct: 401 WRHFAAIIEWLSFFIVIF 418
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.4 bits (43), Expect = 6.5
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +3
Query: 54 SNYARKVHNNKYVLRKFYKKV 116
+NY K +NN Y +K Y +
Sbjct: 307 NNYNYKNYNNNYNSKKLYYNI 327
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 6.5
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +3
Query: 54 SNYARKVHNNKYVLRKFYKKV 116
+NY K +NN Y +K Y +
Sbjct: 318 NNYNYKNYNNNYNSKKLYYNI 338
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 21.4 bits (43), Expect = 6.5
Identities = 6/13 (46%), Positives = 11/13 (84%)
Frame = -2
Query: 236 VSILWVISFIIIF 198
V+ +W++SF+I F
Sbjct: 186 VATVWILSFVICF 198
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 21.0 bits (42), Expect = 8.6
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -1
Query: 96 LKHICYYVLYV 64
L +ICY+V+YV
Sbjct: 482 LLNICYWVIYV 492
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1
Query: 412 RSLENKYDENEEFLKE 459
R E Y+E E+FL+E
Sbjct: 17 RQYEKLYNEKEKFLEE 32
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1
Query: 412 RSLENKYDENEEFLKE 459
R E Y+E E+FL+E
Sbjct: 17 RQYEKLYNEKEKFLEE 32
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1
Query: 412 RSLENKYDENEEFLKE 459
R E Y+E E+FL+E
Sbjct: 17 RQYEKLYNEKEKFLEE 32
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1
Query: 412 RSLENKYDENEEFLKE 459
R E Y+E E+FL+E
Sbjct: 17 RQYEKLYNEKEKFLEE 32
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 21.0 bits (42), Expect = 8.6
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +3
Query: 195 YKYNNETNYPQY 230
YKY+N NY Y
Sbjct: 89 YKYSNYNNYNNY 100
>AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein.
Length = 349
Score = 21.0 bits (42), Expect = 8.6
Identities = 7/19 (36%), Positives = 10/19 (52%)
Frame = -1
Query: 366 YFPIQLWYYTTNKFRIKID 310
Y+ + LWY+ KID
Sbjct: 276 YYVMSLWYWIDRNSAYKID 294
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.0 bits (42), Expect = 8.6
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +3
Query: 195 YKYNNETNYPQY 230
YKY+N NY Y
Sbjct: 322 YKYSNYNNYNNY 333
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.0 bits (42), Expect = 8.6
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = -2
Query: 392 PMLSAATHNTSQSSFGITRLINSGLKSTSLTLMSV 288
P LS + R +NS +KST +LM +
Sbjct: 712 PPLSMLQRMAEFTKLDTNRQVNSAVKSTIQSLMKL 746
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,372
Number of Sequences: 438
Number of extensions: 3535
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16317903
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -