Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21k09
         (325 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_06_0140 + 11147019-11147791,11148301-11150524                       27   2.6  
03_01_0479 + 3671792-3671844,3671950-3675691,3675815-3675895,367...    27   3.4  
10_01_0055 - 785172-785997,786859-787394,787478-787695,787789-78...    27   4.5  
03_06_0177 + 32163393-32163443,32163711-32163803,32163875-321640...    26   7.8  

>10_06_0140 + 11147019-11147791,11148301-11150524
          Length = 998

 Score = 27.5 bits (58), Expect = 2.6
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = -2

Query: 222 PVSLISLWYNARLHLSVSERL*RLPRK*L*HHHSPQPGNPIEAVII 85
           P+    L  N   HL   + L R+ R  L HH+S  PG+ I+A ++
Sbjct: 366 PLGCAKLCDNLGKHLVTEDTLARMKRV-LVHHYSSLPGHVIKACLL 410


>03_01_0479 + 3671792-3671844,3671950-3675691,3675815-3675895,
            3675973-3676042,3676157-3676224
          Length = 1337

 Score = 27.1 bits (57), Expect = 3.4
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = -3

Query: 311  STHLLNTN*IIFYYFNYPG*LPSHSLHKDYQ*ASY-PSGTTHD 186
            ST L+  N +IFY F     L  H+L KD +   + P  TT+D
Sbjct: 949  STELILYNILIFYLFRRRHILQVHNLLKDMKSNGFSPDTTTYD 991


>10_01_0055 -
           785172-785997,786859-787394,787478-787695,787789-787891,
           788723-788770
          Length = 576

 Score = 26.6 bits (56), Expect = 4.5
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +2

Query: 68  ILPTVAIITASIGLPGW 118
           +L  VA+IT S G PGW
Sbjct: 519 VLGAVAVITTSSGAPGW 535


>03_06_0177 +
           32163393-32163443,32163711-32163803,32163875-32164071,
           32164157-32164262,32164391-32164537,32164637-32164756
          Length = 237

 Score = 25.8 bits (54), Expect = 7.8
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +2

Query: 44  FWKKMWYEILPTVAIITASIGLPGWGLWWCHNYFL 148
           FWK + +   PT+       GL G+ ++ C +Y+L
Sbjct: 150 FWKLVAFFATPTITPALFGGGLLGYVMYDCTHYYL 184


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,594,123
Number of Sequences: 37544
Number of extensions: 130742
Number of successful extensions: 264
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 264
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 423156300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)