Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte21k04
(585 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p pro... 211 6e-55
AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal pr... 211 6e-55
AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD... 211 6e-55
AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA... 211 6e-55
AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC... 186 2e-47
AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE... 186 2e-47
AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB... 186 2e-47
>BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p
protein.
Length = 465
Score = 211 bits (515), Expect = 6e-55
Identities = 93/110 (84%), Positives = 101/110 (91%)
Frame = +2
Query: 254 HRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDR 433
HRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DR
Sbjct: 14 HRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADR 73
Query: 434 PGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSE 583
PGSKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE
Sbjct: 74 PGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSE 123
>AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal
protein L3 protein.
Length = 416
Score = 211 bits (515), Expect = 6e-55
Identities = 93/110 (84%), Positives = 101/110 (91%)
Frame = +2
Query: 254 HRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDR 433
HRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DR
Sbjct: 3 HRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADR 62
Query: 434 PGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSE 583
PGSKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE
Sbjct: 63 PGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSE 112
>AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD,
isoform D protein.
Length = 161
Score = 211 bits (515), Expect = 6e-55
Identities = 93/110 (84%), Positives = 101/110 (91%)
Frame = +2
Query: 254 HRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDR 433
HRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DR
Sbjct: 3 HRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADR 62
Query: 434 PGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSE 583
PGSKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE
Sbjct: 63 PGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSE 112
>AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA,
isoform A protein.
Length = 416
Score = 211 bits (515), Expect = 6e-55
Identities = 93/110 (84%), Positives = 101/110 (91%)
Frame = +2
Query: 254 HRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDR 433
HRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DR
Sbjct: 3 HRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADR 62
Query: 434 PGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSE 583
PGSKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE
Sbjct: 63 PGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSE 112
>AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC,
isoform C protein.
Length = 125
Score = 186 bits (453), Expect = 2e-47
Identities = 82/99 (82%), Positives = 90/99 (90%)
Frame = +2
Query: 287 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 466
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 467 EAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSE 583
EAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE
Sbjct: 61 EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSE 99
>AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE,
isoform E protein.
Length = 403
Score = 186 bits (453), Expect = 2e-47
Identities = 82/99 (82%), Positives = 90/99 (90%)
Frame = +2
Query: 287 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 466
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 467 EAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSE 583
EAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE
Sbjct: 61 EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSE 99
>AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB,
isoform B protein.
Length = 403
Score = 186 bits (453), Expect = 2e-47
Identities = 82/99 (82%), Positives = 90/99 (90%)
Frame = +2
Query: 287 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 466
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 467 EAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSE 583
EAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE
Sbjct: 61 EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSE 99
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,294,461
Number of Sequences: 53049
Number of extensions: 550608
Number of successful extensions: 1328
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1293
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1328
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2338128087
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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