Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21k04
         (585 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69337-1|CAA93269.1|  401|Caenorhabditis elegans ribosomal prote...   198   2e-51
Z69336-1|CAA93268.1|  401|Caenorhabditis elegans ribosomal prote...   198   2e-51
Z66495-14|CAH04729.1|  353|Caenorhabditis elegans Hypothetical p...   198   2e-51
Z66495-12|CAA91277.1|  401|Caenorhabditis elegans Hypothetical p...   198   2e-51
Z49936-7|CAH10799.1|  353|Caenorhabditis elegans Hypothetical pr...   198   2e-51
Z49936-6|CAA90183.1|  401|Caenorhabditis elegans Hypothetical pr...   198   2e-51
Z66495-15|CAH04728.1|  303|Caenorhabditis elegans Hypothetical p...    60   1e-09
Z49936-8|CAH10798.1|  303|Caenorhabditis elegans Hypothetical pr...    60   1e-09

>Z69337-1|CAA93269.1|  401|Caenorhabditis elegans ribosomal protein
           L3 protein.
          Length = 401

 Score =  198 bits (484), Expect = 2e-51
 Identities = 84/110 (76%), Positives = 99/110 (90%)
 Frame = +2

Query: 254 HRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDR 433
           HRKFSAPRHG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+
Sbjct: 3   HRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDK 62

Query: 434 PGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSE 583
           PGSK+NKKE+VEAVTI+ETPPMV  GV GY++TP G RAL T+WAEH+SE
Sbjct: 63  PGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSE 112


>Z69336-1|CAA93268.1|  401|Caenorhabditis elegans ribosomal protein
           L3 protein.
          Length = 401

 Score =  198 bits (484), Expect = 2e-51
 Identities = 84/110 (76%), Positives = 99/110 (90%)
 Frame = +2

Query: 254 HRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDR 433
           HRKFSAPRHG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+
Sbjct: 3   HRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDK 62

Query: 434 PGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSE 583
           PGSK+NKKE+VEAVTI+ETPPMV  GV GY++TP G RAL T+WAEH+SE
Sbjct: 63  PGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSE 112


>Z66495-14|CAH04729.1|  353|Caenorhabditis elegans Hypothetical
           protein F13B10.2c protein.
          Length = 353

 Score =  198 bits (484), Expect = 2e-51
 Identities = 84/110 (76%), Positives = 99/110 (90%)
 Frame = +2

Query: 254 HRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDR 433
           HRKFSAPRHG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+
Sbjct: 3   HRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDK 62

Query: 434 PGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSE 583
           PGSK+NKKE+VEAVTI+ETPPMV  GV GY++TP G RAL T+WAEH+SE
Sbjct: 63  PGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSE 112


>Z66495-12|CAA91277.1|  401|Caenorhabditis elegans Hypothetical
           protein F13B10.2a protein.
          Length = 401

 Score =  198 bits (484), Expect = 2e-51
 Identities = 84/110 (76%), Positives = 99/110 (90%)
 Frame = +2

Query: 254 HRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDR 433
           HRKFSAPRHG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+
Sbjct: 3   HRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDK 62

Query: 434 PGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSE 583
           PGSK+NKKE+VEAVTI+ETPPMV  GV GY++TP G RAL T+WAEH+SE
Sbjct: 63  PGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSE 112


>Z49936-7|CAH10799.1|  353|Caenorhabditis elegans Hypothetical
           protein F13B10.2c protein.
          Length = 353

 Score =  198 bits (484), Expect = 2e-51
 Identities = 84/110 (76%), Positives = 99/110 (90%)
 Frame = +2

Query: 254 HRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDR 433
           HRKFSAPRHG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+
Sbjct: 3   HRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDK 62

Query: 434 PGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSE 583
           PGSK+NKKE+VEAVTI+ETPPMV  GV GY++TP G RAL T+WAEH+SE
Sbjct: 63  PGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSE 112


>Z49936-6|CAA90183.1|  401|Caenorhabditis elegans Hypothetical
           protein F13B10.2a protein.
          Length = 401

 Score =  198 bits (484), Expect = 2e-51
 Identities = 84/110 (76%), Positives = 99/110 (90%)
 Frame = +2

Query: 254 HRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDR 433
           HRKFSAPRHG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+
Sbjct: 3   HRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDK 62

Query: 434 PGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSE 583
           PGSK+NKKE+VEAVTI+ETPPMV  GV GY++TP G RAL T+WAEH+SE
Sbjct: 63  PGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSE 112


>Z66495-15|CAH04728.1|  303|Caenorhabditis elegans Hypothetical
           protein F13B10.2d protein.
          Length = 303

 Score = 60.1 bits (139), Expect = 1e-09
 Identities = 25/32 (78%), Positives = 28/32 (87%)
 Frame = +2

Query: 254 HRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPK 349
           HRKFSAPRHG MGF PKKRSR +RG++KAF K
Sbjct: 3   HRKFSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34


>Z49936-8|CAH10798.1|  303|Caenorhabditis elegans Hypothetical
           protein F13B10.2d protein.
          Length = 303

 Score = 60.1 bits (139), Expect = 1e-09
 Identities = 25/32 (78%), Positives = 28/32 (87%)
 Frame = +2

Query: 254 HRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPK 349
           HRKFSAPRHG MGF PKKRSR +RG++KAF K
Sbjct: 3   HRKFSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,454,554
Number of Sequences: 27780
Number of extensions: 280457
Number of successful extensions: 586
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 586
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1226509528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)