Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21k03
         (426 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83128-1|CAB05635.1|   92|Caenorhabditis elegans Hypothetical pr...   111   2e-25
Z77131-1|CAB00854.1|   91|Caenorhabditis elegans Hypothetical pr...   105   2e-23
AF098986-5|AAC67426.1|  671|Caenorhabditis elegans Hypothetical ...    31   0.35 
U41275-2|AAA82465.1|  438|Caenorhabditis elegans Hypothetical pr...    31   0.46 
Z48009-8|CAA88081.1|  329|Caenorhabditis elegans Hypothetical pr...    29   1.8  
Z92777-6|CAE17682.1|  353|Caenorhabditis elegans Hypothetical pr...    28   2.4  
Z93380-2|CAB07596.1|  340|Caenorhabditis elegans Hypothetical pr...    27   4.3  
Z81587-1|CAB04701.1|  340|Caenorhabditis elegans Hypothetical pr...    27   4.3  
Z93380-6|CAB07602.2|  339|Caenorhabditis elegans Hypothetical pr...    27   5.6  
Z81587-13|CAB04710.2|  339|Caenorhabditis elegans Hypothetical p...    27   5.6  
AF039049-1|AAB94253.1|  299|Caenorhabditis elegans Serpentine re...    27   5.6  

>Z83128-1|CAB05635.1|   92|Caenorhabditis elegans Hypothetical
           protein W01D2.1 protein.
          Length = 92

 Score =  111 bits (267), Expect = 2e-25
 Identities = 46/86 (53%), Positives = 59/86 (68%)
 Frame = +3

Query: 99  TKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXX 278
           TKGT +FGK+  K+HTLC+RCG+SS+HIQK +CA CGYP AK R+Y+W  K+        
Sbjct: 2   TKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYPDAKKRTYNWGAKSIRRRTTGT 61

Query: 279 XXMRHLKIVRRRFRNGFKEGKPTPPK 356
              RHL+ V  RFRNGF+EG    P+
Sbjct: 62  GRTRHLRDVNARFRNGFREGTTPKPR 87


>Z77131-1|CAB00854.1|   91|Caenorhabditis elegans Hypothetical
           protein C54C6.1 protein.
          Length = 91

 Score =  105 bits (251), Expect = 2e-23
 Identities = 44/84 (52%), Positives = 56/84 (66%)
 Frame = +3

Query: 99  TKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXX 278
           TKGT +FGK+  K+HTLC+RCG+SS+HIQK +CA CGY  AK R+Y+W  K+        
Sbjct: 2   TKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYQDAKKRTYNWGAKSIRRRTTGT 61

Query: 279 XXMRHLKIVRRRFRNGFKEGKPTP 350
              RHL+ V  RFRNGF+   P P
Sbjct: 62  GRTRHLRDVNARFRNGFRGTTPKP 85


>AF098986-5|AAC67426.1|  671|Caenorhabditis elegans Hypothetical
           protein C36C9.4 protein.
          Length = 671

 Score = 31.1 bits (67), Expect = 0.35
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +3

Query: 114 SFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAA 221
           ++ K    TH  C +CG+ + +    KC  CG P A
Sbjct: 93  TYNKNNFSTHHFCNKCGKVAQN--SKKCKHCGGPVA 126


>U41275-2|AAA82465.1|  438|Caenorhabditis elegans Hypothetical
           protein T25D1.2 protein.
          Length = 438

 Score = 30.7 bits (66), Expect = 0.46
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +3

Query: 114 SFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAA 221
           ++ K    TH  C +CG+ + +    KC  CG P A
Sbjct: 165 TYNKNNFSTHHFCNKCGKVAQN--SKKCKYCGGPVA 198


>Z48009-8|CAA88081.1|  329|Caenorhabditis elegans Hypothetical
           protein AH6.11 protein.
          Length = 329

 Score = 28.7 bits (61), Expect = 1.8
 Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
 Frame = -1

Query: 231 IVILLQDIHIGRILIFECDMTIYHIFCITYGSYFGAYRSLRYPS-YNYFVSLDSLISILL 55
           I IL   +  G+I+I++  +  Y + C++Y S     RS  + S Y +  S + + S+LL
Sbjct: 149 IAILFLSLITGKIIIWDDPLQGYLLSCVSYPSQ-SVERSRLFASIYTFISSFNLVFSVLL 207


>Z92777-6|CAE17682.1|  353|Caenorhabditis elegans Hypothetical
           protein C17H1.9 protein.
          Length = 353

 Score = 28.3 bits (60), Expect = 2.4
 Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
 Frame = +1

Query: 127 AEIRPIRYAEDVVDRH---ITFKNQNAPNVDILQQNYDP 234
           A+++ I+Y  D +++H   + F+NQ   +   L+ N DP
Sbjct: 230 ADLKKIKYTSDEIEKHKSKLEFRNQQLESSRTLEINADP 268


>Z93380-2|CAB07596.1|  340|Caenorhabditis elegans Hypothetical
           protein F28C12.2 protein.
          Length = 340

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = -1

Query: 165 YHIFCITYGSYFGAYRSLRYPSYNYFVSLDSLISILL 55
           Y +F +T+      Y+S  Y  + YF++   L+  LL
Sbjct: 124 YSVFSLTFDRLISHYKSRYYHMHQYFIATSLLVLQLL 160


>Z81587-1|CAB04701.1|  340|Caenorhabditis elegans Hypothetical
           protein T06G6.1 protein.
          Length = 340

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = -1

Query: 165 YHIFCITYGSYFGAYRSLRYPSYNYFVSLDSLI 67
           Y +F +T+      Y+S  Y  + YF+++  L+
Sbjct: 125 YSVFSLTFDRLISHYKSKYYHMHQYFIAISLLV 157


>Z93380-6|CAB07602.2|  339|Caenorhabditis elegans Hypothetical
           protein F28C12.7 protein.
          Length = 339

 Score = 27.1 bits (57), Expect = 5.6
 Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = -1

Query: 165 YHIFCITYGSYFGAYRSLRYPSYNYFVSLDSL-ISILLEMI 46
           Y +F +T       Y+S  Y ++ YF+++  L I +LL ++
Sbjct: 125 YSVFSLTSDRLVSHYKSKFYHTHQYFIAISLLVIQLLLTLV 165


>Z81587-13|CAB04710.2|  339|Caenorhabditis elegans Hypothetical
           protein F28C12.7 protein.
          Length = 339

 Score = 27.1 bits (57), Expect = 5.6
 Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = -1

Query: 165 YHIFCITYGSYFGAYRSLRYPSYNYFVSLDSL-ISILLEMI 46
           Y +F +T       Y+S  Y ++ YF+++  L I +LL ++
Sbjct: 125 YSVFSLTSDRLVSHYKSKFYHTHQYFIAISLLVIQLLLTLV 165


>AF039049-1|AAB94253.1|  299|Caenorhabditis elegans Serpentine
           receptor, class x protein68 protein.
          Length = 299

 Score = 27.1 bits (57), Expect = 5.6
 Identities = 9/36 (25%), Positives = 21/36 (58%)
 Frame = -1

Query: 207 HIGRILIFECDMTIYHIFCITYGSYFGAYRSLRYPS 100
           H G +++F  +++++  F I+   +F  +  L+Y S
Sbjct: 77  HCGFVILFCYELSVFTHFAISINRFFAVWMPLKYES 112


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,938,914
Number of Sequences: 27780
Number of extensions: 171871
Number of successful extensions: 361
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 359
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 361
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 703342068
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)