Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21k03
         (426 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    24   0.62 
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    22   3.3  

>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 24.2 bits (50), Expect = 0.62
 Identities = 11/38 (28%), Positives = 22/38 (57%)
 Frame = -1

Query: 159 IFCITYGSYFGAYRSLRYPSYNYFVSLDSLISILLEMI 46
           +FCIT+G   G + +      ++F+ L+ +I  L+ +I
Sbjct: 245 VFCITFGLVAGQFGAQGKLIVDFFMILNEIIMKLVGII 282


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = +1

Query: 82  TDKIIIRRVPQASVSAEIRPIRYAEDVVDRHITFKN 189
           ++K+ +   P      E+RPI+  +D  + +  +KN
Sbjct: 122 SNKMTVILTPPGRFFCEVRPIKRVKDSTNCNCGWKN 157


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,034
Number of Sequences: 438
Number of extensions: 2348
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10997463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)