Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte21j10
(619 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 35 6e-04
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 35 6e-04
AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C prot... 27 0.19
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 25 0.59
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 23 2.4
AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength rhodo... 23 2.4
AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength rhodo... 23 2.4
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 23 3.2
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 22 5.5
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 7.3
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 21 7.3
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 35.1 bits (77), Expect = 6e-04
Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 7/99 (7%)
Frame = +1
Query: 274 GYM-LGRTIGSGSYATV-----KVASSDRHNCQVAIKIISKFQAPGDYLKKFLPREIEVV 435
GY+ + IG G + V K+ R VAIK + A D + E ++
Sbjct: 631 GYITIEAIIGGGEFGDVCRGKLKLPPDGRTEIDVAIKTLKPGSA--DKARNDFLTEASIM 688
Query: 436 KGLKHENLIRFLQAIET-THRVYIVMEYAENGSLLDIIR 549
+H N+I FLQ + T ++ V I+ E+ ENGSL +R
Sbjct: 689 GQFEHPNVI-FLQGVVTKSNPVMIITEFMENGSLDTFLR 726
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 35.1 bits (77), Expect = 6e-04
Identities = 23/110 (20%), Positives = 50/110 (45%), Gaps = 1/110 (0%)
Frame = +1
Query: 292 TIGSGSYATVKVAS-SDRHNCQVAIKIISKFQAPGDYLKKFLPREIEVVKGLKHENLIRF 468
T+G G + V++ + + A+K + K Q ++ + E ++ + +++
Sbjct: 372 TLGVGGFGRVELVQIAGDSSRSFALKQMKKAQIVETRQQQHIMSEKRIMGEADCDFVVKL 431
Query: 469 LQAIETTHRVYIVMEYAENGSLLDIIRKDQHIDETRGRRWFKQLVEAVDY 618
+ + +Y++ME G L ++R H D+ R + +VEA DY
Sbjct: 432 FKTFKDRKYLYMLMEACLGGELWTVLRDKGHFDDGTTRFYTACVVEAFDY 481
>AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C
protein.
Length = 149
Score = 26.6 bits (56), Expect = 0.19
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +1
Query: 457 LIRFLQAIETTHRVYIVMEYAENGSLL 537
L++ +T R+Y VMEY G L+
Sbjct: 47 LVQLHSCFQTMDRLYFVMEYVNGGDLM 73
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 25.0 bits (52), Expect = 0.59
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 185 SARCQQSLRLRYIAVWKPKLKGN*RFLKATVTCLA 289
S RC + LR+ +W+ L R L AT C A
Sbjct: 20 SVRCSAASGLRWFEIWRDSLPTKMRELNAT-ACAA 53
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 23.0 bits (47), Expect = 2.4
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 280 MLGRTIGSGSYATVKVASSDRHN 348
MLG G GS T+ + + DR+N
Sbjct: 130 MLGSLFGCGSIWTMTMIAFDRYN 152
>AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength
rhodopsin protein.
Length = 152
Score = 23.0 bits (47), Expect = 2.4
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 280 MLGRTIGSGSYATVKVASSDRHN 348
MLG G GS T+ + + DR+N
Sbjct: 96 MLGSLFGCGSIWTMTMIAFDRYN 118
>AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength
rhodopsin protein.
Length = 154
Score = 23.0 bits (47), Expect = 2.4
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 280 MLGRTIGSGSYATVKVASSDRHN 348
MLG G GS T+ + + DR+N
Sbjct: 6 MLGSLFGCGSIWTMTMIAFDRYN 28
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 22.6 bits (46), Expect = 3.2
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = +1
Query: 346 NCQVAIKIISKFQAPGDYLKKFLP 417
+C ++ K GDY++++LP
Sbjct: 428 HCYCPVRFGRKADPNGDYIRRYLP 451
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 21.8 bits (44), Expect = 5.5
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = -2
Query: 372 DYFNSNLTIMSVARGHLNSCIGTGPNCSAKHVTVAF 265
D N+ + + + NSC+G+ +KH T F
Sbjct: 360 DSMNAVIRNFNESENRRNSCLGSTETYYSKHNTQQF 395
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.4 bits (43), Expect = 7.3
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = +1
Query: 157 PDVRTHDNVLGEMSAEPTATVHSGVEAKTERKLTVLESHGYML 285
P + DNV+ S + S A++E+ L E+H + L
Sbjct: 704 PRIMDLDNVMCRTSGPRGVAIVSASTARSEQFLCRYEAHCFAL 746
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 21.4 bits (43), Expect = 7.3
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +3
Query: 540 HYTKRSAHR*DPW 578
HY K S H+ PW
Sbjct: 323 HYRKPSTHKMAPW 335
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,617
Number of Sequences: 438
Number of extensions: 3031
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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