Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21j08
         (570 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC117697-1|AAI17698.1| 1690|Homo sapiens COL11A1 protein protein.      34   0.31 
X98507-1|CAA67131.1| 1028|Homo sapiens myosin I beta protein.          32   1.2  
BC068013-1|AAH68013.1| 1028|Homo sapiens myosin IC protein.            32   1.2  
BC044891-1|AAH44891.2| 1028|Homo sapiens MYO1C protein protein.        32   1.2  
AB210015-1|BAE06097.1| 1097|Homo sapiens MYO1C variant protein p...    32   1.2  
U28249-1|AAA73922.1|  111|Homo sapiens 11kD protein protein.           29   8.7  
BX640673-1|CAE45805.1|  648|Homo sapiens hypothetical protein pr...    29   8.7  
BC126307-1|AAI26308.1|  986|Homo sapiens MYOCD protein protein.        29   8.7  
AY764180-1|AAV33439.1|  986|Homo sapiens myocardin protein.            29   8.7  
AK097821-1|BAC05177.1|  684|Homo sapiens protein ( Homo sapiens ...    29   8.7  
AK023513-1|BAB14595.1|  134|Homo sapiens protein ( Homo sapiens ...    29   8.7  
AF532596-1|AAN33040.1|  938|Homo sapiens myocardin transcription...    29   8.7  

>BC117697-1|AAI17698.1| 1690|Homo sapiens COL11A1 protein protein.
          Length = 1690

 Score = 34.3 bits (75), Expect = 0.31
 Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
 Frame = +3

Query: 324 EYIEDENV-EFPTCCARLRCVVEVNGERIVQTRGQPGELFPDKPWKGQQNEPNPA----V 488
           EY E E+V E PT         E+NG      +GQ GE    +P    +  P PA    +
Sbjct: 277 EYKEAESVTEGPTVTEETIAQTEINGHGAYGEKGQKGEPAVVEPGMLVEGPPGPAGPAGI 336

Query: 489 VGMSGIQ-QTPVGGEPQGQASPG 554
           +G  G+Q  T   G+P  +  PG
Sbjct: 337 MGPPGLQGPTGPPGDPGDRGPPG 359


>X98507-1|CAA67131.1| 1028|Homo sapiens myosin I beta protein.
          Length = 1028

 Score = 32.3 bits (70), Expect = 1.2
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = +3

Query: 120 VLPALSAEDVSYQACVDKYSRKGYQP 197
           VL AL +E + Y   V KY RKGY+P
Sbjct: 875 VLQALGSEPIQYAVPVVKYDRKGYKP 900


>BC068013-1|AAH68013.1| 1028|Homo sapiens myosin IC protein.
          Length = 1028

 Score = 32.3 bits (70), Expect = 1.2
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = +3

Query: 120 VLPALSAEDVSYQACVDKYSRKGYQP 197
           VL AL +E + Y   V KY RKGY+P
Sbjct: 875 VLQALGSEPIQYAVPVVKYDRKGYKP 900


>BC044891-1|AAH44891.2| 1028|Homo sapiens MYO1C protein protein.
          Length = 1028

 Score = 32.3 bits (70), Expect = 1.2
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = +3

Query: 120 VLPALSAEDVSYQACVDKYSRKGYQP 197
           VL AL +E + Y   V KY RKGY+P
Sbjct: 875 VLQALGSEPIQYAVPVVKYDRKGYKP 900


>AB210015-1|BAE06097.1| 1097|Homo sapiens MYO1C variant protein
            protein.
          Length = 1097

 Score = 32.3 bits (70), Expect = 1.2
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = +3

Query: 120  VLPALSAEDVSYQACVDKYSRKGYQP 197
            VL AL +E + Y   V KY RKGY+P
Sbjct: 944  VLQALGSEPIQYAVPVVKYDRKGYKP 969


>U28249-1|AAA73922.1|  111|Homo sapiens 11kD protein protein.
          Length = 111

 Score = 29.5 bits (63), Expect = 8.7
 Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 5/69 (7%)
 Frame = +2

Query: 359 VLCAIALRR-RSKWRENSANQRAAWRTVPR*TMEGPTKRAKSCCC----RNERHPADTGR 523
           VLCA+ +    S+WR +       W + P  T   PT     C C    ++  HP +T  
Sbjct: 45  VLCAMGIIIVMSEWRSSGEQAGRGWGSPPLTTQLSPT--GAKCKCKFGQKSGHHPGETPP 102

Query: 524 WRAPGSGVS 550
              PGS  S
Sbjct: 103 LITPGSAQS 111


>BX640673-1|CAE45805.1|  648|Homo sapiens hypothetical protein
           protein.
          Length = 648

 Score = 29.5 bits (63), Expect = 8.7
 Identities = 16/53 (30%), Positives = 22/53 (41%)
 Frame = -3

Query: 460 PFHGLSGNSSPGCPLVCTILSPFTSTTQRNRAQHVGNSTFSSSMYSWHSSAFS 302
           PF   SGN  P    + T+  P T  T  N       S  S+  Y + S++ S
Sbjct: 108 PFQDCSGNPVPNFGDITTVTFPVTPNTLPNYQSSSSTSALSNGFYHFGSTSSS 160


>BC126307-1|AAI26308.1|  986|Homo sapiens MYOCD protein protein.
          Length = 986

 Score = 29.5 bits (63), Expect = 8.7
 Identities = 16/53 (30%), Positives = 22/53 (41%)
 Frame = -3

Query: 460 PFHGLSGNSSPGCPLVCTILSPFTSTTQRNRAQHVGNSTFSSSMYSWHSSAFS 302
           PF   SGN  P    + T+  P T  T  N       S  S+  Y + S++ S
Sbjct: 403 PFQDCSGNPVPNFGDITTVTFPVTPNTLPNYQSSSSTSALSNGFYHFGSTSSS 455


>AY764180-1|AAV33439.1|  986|Homo sapiens myocardin protein.
          Length = 986

 Score = 29.5 bits (63), Expect = 8.7
 Identities = 16/53 (30%), Positives = 22/53 (41%)
 Frame = -3

Query: 460 PFHGLSGNSSPGCPLVCTILSPFTSTTQRNRAQHVGNSTFSSSMYSWHSSAFS 302
           PF   SGN  P    + T+  P T  T  N       S  S+  Y + S++ S
Sbjct: 403 PFQDCSGNPVPNFGDITTVTFPVTPNTLPNYQSSSSTSALSNGFYHFGSTSSS 455


>AK097821-1|BAC05177.1|  684|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40502 fis, clone TESTI2045199. ).
          Length = 684

 Score = 29.5 bits (63), Expect = 8.7
 Identities = 16/53 (30%), Positives = 22/53 (41%)
 Frame = -3

Query: 460 PFHGLSGNSSPGCPLVCTILSPFTSTTQRNRAQHVGNSTFSSSMYSWHSSAFS 302
           PF   SGN  P    + T+  P T  T  N       S  S+  Y + S++ S
Sbjct: 307 PFQDCSGNPVPNFGDITTVTFPVTPNTLPNYQSSSSTSALSNGFYHFGSTSSS 359


>AK023513-1|BAB14595.1|  134|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13451 fis, clone PLACE1003030, weakly similar to
           Homo sapiens snRNA activating protein complex 190kD
           subunit ).
          Length = 134

 Score = 29.5 bits (63), Expect = 8.7
 Identities = 13/29 (44%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
 Frame = -3

Query: 538 PWGS--PPTGVCWMPLIPTTAGFGSFCWP 458
           PWGS  P  G+ WM   P   G  S  WP
Sbjct: 14  PWGSGRPTRGMAWMGSEPPREGVHSHVWP 42


>AF532596-1|AAN33040.1|  938|Homo sapiens myocardin transcription
           factor protein.
          Length = 938

 Score = 29.5 bits (63), Expect = 8.7
 Identities = 16/53 (30%), Positives = 22/53 (41%)
 Frame = -3

Query: 460 PFHGLSGNSSPGCPLVCTILSPFTSTTQRNRAQHVGNSTFSSSMYSWHSSAFS 302
           PF   SGN  P    + T+  P T  T  N       S  S+  Y + S++ S
Sbjct: 403 PFQDCSGNPVPNFGDITTVTFPVTPNTLPNYQSSSSTSALSNGFYHFGSTSSS 455


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,210,714
Number of Sequences: 237096
Number of extensions: 2288291
Number of successful extensions: 10274
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 9855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10274
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5816287018
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)