Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21j05
         (322 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT025210-1|ABF17901.1|  553|Drosophila melanogaster FI01104p pro...    27   7.1  
AE014298-817|AAF46100.1|  553|Drosophila melanogaster CG12236-PA...    27   7.1  
AE013599-616|AAF59114.3| 4699|Drosophila melanogaster CG33087-PC...    26   9.4  

>BT025210-1|ABF17901.1|  553|Drosophila melanogaster FI01104p
           protein.
          Length = 553

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -3

Query: 131 LRQINSAFITMKFKSINLIKFRVHVRHSSIFIKKH 27
           L  +N +F     KS+N ++  +  RHS I  K+H
Sbjct: 478 LAPLNCSFCGRPLKSVNALRRHIASRHSEIQGKEH 512


>AE014298-817|AAF46100.1|  553|Drosophila melanogaster CG12236-PA,
           isoform A protein.
          Length = 553

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -3

Query: 131 LRQINSAFITMKFKSINLIKFRVHVRHSSIFIKKH 27
           L  +N +F     KS+N ++  +  RHS I  K+H
Sbjct: 478 LAPLNCSFCGRPLKSVNALRRHIASRHSEIQGKEH 512


>AE013599-616|AAF59114.3| 4699|Drosophila melanogaster CG33087-PC
            protein.
          Length = 4699

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +3

Query: 135  KAYKSNVYKQCGDRVSEF*MLC*LRNSLIEMH 230
            K +K +  +QCGD   E  +LC  ++  I+MH
Sbjct: 2633 KEHKCDGEQQCGDGSDETPLLCKCQSEDIDMH 2664


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,302,007
Number of Sequences: 53049
Number of extensions: 181199
Number of successful extensions: 220
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 220
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 674007744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)