Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte21j02
(657 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 192 1e-49
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 164 4e-41
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 118 1e-35
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 130 8e-31
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 114 6e-26
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 96 2e-20
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 79 4e-15
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 79 4e-15
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 73 2e-13
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 73 2e-13
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 70 2e-12
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 70 2e-12
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 70 2e-12
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 61 6e-10
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 59 2e-09
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 59 2e-09
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 59 2e-09
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 59 2e-09
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 59 2e-09
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 59 2e-09
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 58 4e-09
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 57 1e-08
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 57 1e-08
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 57 1e-08
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 56 2e-08
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 55 5e-08
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 55 5e-08
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 55 5e-08
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 53 2e-07
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 53 2e-07
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 51 6e-07
U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 50 2e-06
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 49 3e-06
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 48 8e-06
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 48 8e-06
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 48 8e-06
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 47 1e-05
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 47 1e-05
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 47 1e-05
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 47 1e-05
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 47 1e-05
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 47 1e-05
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 47 1e-05
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 47 1e-05
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 47 1e-05
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 46 2e-05
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 46 2e-05
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 46 2e-05
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 46 3e-05
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 46 3e-05
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 45 4e-05
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 45 4e-05
Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical pr... 44 7e-05
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 43 2e-04
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 43 2e-04
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 43 2e-04
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 43 2e-04
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 42 3e-04
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 42 3e-04
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 42 3e-04
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 42 4e-04
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 42 5e-04
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 39 0.003
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 39 0.003
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 39 0.004
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 39 0.004
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 37 0.011
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 37 0.011
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 37 0.011
Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical pr... 37 0.014
U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein. 37 0.014
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 36 0.019
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 36 0.025
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 35 0.044
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 35 0.044
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 35 0.044
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 34 0.10
U55857-6|AAA98032.2| 206|Caenorhabditis elegans Rnp (rrm rna bi... 34 0.10
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 34 0.10
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 34 0.10
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 34 0.10
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 33 0.18
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 33 0.18
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 33 0.18
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 33 0.18
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 33 0.24
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 33 0.24
Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical pr... 32 0.31
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 32 0.31
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 32 0.31
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 32 0.31
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 32 0.31
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 32 0.31
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 31 0.54
AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical... 31 0.72
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 31 0.72
U55370-7|AAA97998.2| 388|Caenorhabditis elegans Hypothetical pr... 29 2.2
AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical ... 29 2.2
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 28 5.1
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 28 5.1
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 28 5.1
AF099919-4|AAC68791.1| 230|Caenorhabditis elegans Hypothetical ... 28 5.1
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 28 6.7
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 192 bits (469), Expect = 1e-49
Identities = 91/162 (56%), Positives = 115/162 (70%), Gaps = 1/162 (0%)
Frame = +3
Query: 174 NMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXX 353
N DE P+TLYVGNLD +VTE F+ TLF QIG V K+I + NDPYAF+EF+ H
Sbjct: 40 NGSDE--PRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDGSNDPYAFVEFSDHGQA 97
Query: 354 XXXXXXMNKRVVLDKEMKVNWATSPG-NQPKTDTSNHHHIFVGDLSPEIETNILREAFAP 530
MNKR++LD+EMKVNWA PG Q K DT+ H H+FVGDLS E++ LREAF P
Sbjct: 98 SQALQTMNKRLLLDREMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQP 157
Query: 531 FGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQ 656
FG++S+ +++RD T KSKGY FVS+ K+ +AE AI+ MNGQ
Sbjct: 158 FGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQ 199
Score = 58.4 bits (135), Expect = 4e-09
Identities = 51/169 (30%), Positives = 72/169 (42%), Gaps = 18/169 (10%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP---YAFLEFTCHXXXXXXXXXM 374
++VG+L V L F GDV K+IR+ Y F+ + M
Sbjct: 137 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 196
Query: 375 NKRVVLDKEMKVNWAT-SPGNQPKTDTSNHHH--------------IFVGDLSPEIETNI 509
N + + + ++ NWAT PG+Q K N ++VG+++ E I
Sbjct: 197 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIASLTEDEI 256
Query: 510 LREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQ 656
R+ FA FG I+ RI K +GYAFV F K A AI MN Q
Sbjct: 257 -RQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMNNQ 298
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 164 bits (399), Expect = 4e-41
Identities = 82/157 (52%), Positives = 102/157 (64%), Gaps = 4/157 (2%)
Frame = +3
Query: 195 PKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXM 374
P+TL+V NLDP++T+ FL TLF QIG V KII E NDPYAF+EF+ H
Sbjct: 39 PRTLFVANLDPAITDEFLATLFNQIGAVMKAKIIFEGLNDPYAFVEFSDHNQATLALQSH 98
Query: 375 NKRVVLDKEMKVNWATSPG----NQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEI 542
N R +L+KEM V WA P N+ K +TS H H+FVGDL EI++ LREAF FGE+
Sbjct: 99 NGRELLEKEMHVTWAFEPREPGENRSKPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEV 158
Query: 543 SNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNG 653
S +I+RD T K KGY FVS+ ++ DAE AI MNG
Sbjct: 159 SEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEMNG 195
Score = 36.7 bits (81), Expect = 0.014
Identities = 28/73 (38%), Positives = 37/73 (50%)
Frame = +3
Query: 432 NQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFV 611
NQ D ++ ++VG+++ E I R AF FG I+ R T K +GYAFV F
Sbjct: 249 NQAAADNTS---VYVGNIANLGEDEI-RRAFDRFGPINEVR------TFKIQGYAFVKFE 298
Query: 612 KKADAEAAIQAMN 650
K A AI MN
Sbjct: 299 TKESAARAIVQMN 311
Score = 33.1 bits (72), Expect = 0.18
Identities = 22/80 (27%), Positives = 35/80 (43%)
Frame = +3
Query: 417 ATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYA 596
A G Q + + + +FV +L P I L F G + +I+ + + YA
Sbjct: 25 AEREGFQLASGSEDPRTLFVANLDPAITDEFLATLFNQIGAVMKAKIIFEGL---NDPYA 81
Query: 597 FVSFVKKADAEAAIQAMNGQ 656
FV F A A+Q+ NG+
Sbjct: 82 FVEFSDHNQATLALQSHNGR 101
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 118 bits (284), Expect(2) = 1e-35
Identities = 53/96 (55%), Positives = 69/96 (71%), Gaps = 1/96 (1%)
Frame = +3
Query: 372 MNKRVVLDKEMKVNWATSPGNQP-KTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISN 548
+ K V+ EMKVNWA PG Q K DT+ H H+FVGDLS E++ LREAF PFG++S+
Sbjct: 72 VTKTKVIFDEMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSD 131
Query: 549 CRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQ 656
+++RD T KSKGY FVS+ K+ +AE AI+ MNGQ
Sbjct: 132 AKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQ 167
Score = 58.4 bits (135), Expect = 4e-09
Identities = 51/169 (30%), Positives = 72/169 (42%), Gaps = 18/169 (10%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP---YAFLEFTCHXXXXXXXXXM 374
++VG+L V L F GDV K+IR+ Y F+ + M
Sbjct: 105 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 164
Query: 375 NKRVVLDKEMKVNWAT-SPGNQPKTDTSNHHH--------------IFVGDLSPEIETNI 509
N + + + ++ NWAT PG+Q K N ++VG+++ E I
Sbjct: 165 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIASLTEDEI 224
Query: 510 LREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQ 656
R+ FA FG I+ RI K +GYAFV F K A AI MN Q
Sbjct: 225 -RQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMNNQ 266
Score = 49.6 bits (113), Expect(2) = 1e-35
Identities = 25/41 (60%), Positives = 29/41 (70%)
Frame = +3
Query: 174 NMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKII 296
N DE P+TLYVGNLD +VTE F+ TLF QIG V K+I
Sbjct: 40 NGSDE--PRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVI 78
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 130 bits (314), Expect = 8e-31
Identities = 57/96 (59%), Positives = 74/96 (77%), Gaps = 1/96 (1%)
Frame = +3
Query: 372 MNKRVVLDKEMKVNWATSPGNQP-KTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISN 548
MNKR++LD+EMKVNWA PG Q K DT+ H H+FVGDLS E++ LREAF PFG++S+
Sbjct: 1 MNKRLLLDREMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSD 60
Query: 549 CRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQ 656
+++RD T KSKGY FVS+ K+ +AE AI+ MNGQ
Sbjct: 61 AKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQ 96
Score = 58.4 bits (135), Expect = 4e-09
Identities = 51/169 (30%), Positives = 72/169 (42%), Gaps = 18/169 (10%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP---YAFLEFTCHXXXXXXXXXM 374
++VG+L V L F GDV K+IR+ Y F+ + M
Sbjct: 34 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 93
Query: 375 NKRVVLDKEMKVNWAT-SPGNQPKTDTSNHHH--------------IFVGDLSPEIETNI 509
N + + + ++ NWAT PG+Q K N ++VG+++ E I
Sbjct: 94 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIASLTEDEI 153
Query: 510 LREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQ 656
R+ FA FG I+ RI K +GYAFV F K A AI MN Q
Sbjct: 154 -RQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMNNQ 195
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 114 bits (274), Expect = 6e-26
Identities = 50/86 (58%), Positives = 64/86 (74%), Gaps = 1/86 (1%)
Frame = +3
Query: 402 MKVNWATSPGNQP-KTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTL 578
MKVNWA PG Q K DT+ H H+FVGDLS E++ LREAF PFG++S+ +++RD T
Sbjct: 1 MKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTT 60
Query: 579 KSKGYAFVSFVKKADAEAAIQAMNGQ 656
KSKGY FVS+ K+ +AE AI+ MNGQ
Sbjct: 61 KSKGYGFVSYPKREEAERAIEQMNGQ 86
Score = 58.4 bits (135), Expect = 4e-09
Identities = 51/169 (30%), Positives = 72/169 (42%), Gaps = 18/169 (10%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP---YAFLEFTCHXXXXXXXXXM 374
++VG+L V L F GDV K+IR+ Y F+ + M
Sbjct: 24 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 83
Query: 375 NKRVVLDKEMKVNWAT-SPGNQPKTDTSNHHH--------------IFVGDLSPEIETNI 509
N + + + ++ NWAT PG+Q K N ++VG+++ E I
Sbjct: 84 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIASLTEDEI 143
Query: 510 LREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQ 656
R+ FA FG I+ RI K +GYAFV F K A AI MN Q
Sbjct: 144 -RQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMNNQ 185
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 95.9 bits (228), Expect = 2e-20
Identities = 42/91 (46%), Positives = 60/91 (65%)
Frame = +3
Query: 384 VVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
+VL + ++ A+ P + + DTS H H+FVGDLS ++ +L+ F FGE+S +++R
Sbjct: 109 IVLQESAVLHSASEPPMEMRIDTSKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIR 168
Query: 564 DPQTLKSKGYAFVSFVKKADAEAAIQAMNGQ 656
D QT KSKGY FVSF K +AE AI MNG+
Sbjct: 169 DVQTQKSKGYGFVSFPNKQNAENAIAGMNGK 199
Score = 57.6 bits (133), Expect = 7e-09
Identities = 43/172 (25%), Positives = 79/172 (45%), Gaps = 14/172 (8%)
Frame = +3
Query: 183 DESHPKTLYVGNLDPSVTEVFL---CTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXX 353
D S ++VG+L V+ L T FG++ + K + ++ + Y F+ F
Sbjct: 130 DTSKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNA 189
Query: 354 XXXXXXMNKRVVLDKEMKVNWATSPGNQPKTD-----------TSNHHHIFVGDLSPEIE 500
MN + + + ++ NWA ++ D +++ ++VG++S +
Sbjct: 190 ENAIAGMNGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNTSVYVGNISQQTT 249
Query: 501 TNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQ 656
LR+ F+ +G+I+ RI K++ YAFV + KK A AI MNG+
Sbjct: 250 DADLRDLFSTYGDIAEVRI------FKTQRYAFVRYEKKECATKAIMEMNGK 295
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 78.6 bits (185), Expect = 4e-15
Identities = 50/162 (30%), Positives = 84/162 (51%), Gaps = 4/162 (2%)
Frame = +3
Query: 183 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE---PGNDPYAFLEFTCHXXX 353
+ + T+YVG LD V+E L L Q G V + ++ + + F+EF
Sbjct: 8 ERNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDA 67
Query: 354 XXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPF 533
+N + K +KVN A++ ++ D + IFVG+L PE++ +L + F+ F
Sbjct: 68 DYAIKILNMIKLYGKPIKVNKASA--HEKNMDVGAN--IFVGNLDPEVDEKLLYDTFSAF 123
Query: 534 GEISNC-RIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQ 656
G I +I+RD + SKG+AF++F ++ A++AMNGQ
Sbjct: 124 GVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQ 165
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 78.6 bits (185), Expect = 4e-15
Identities = 50/162 (30%), Positives = 84/162 (51%), Gaps = 4/162 (2%)
Frame = +3
Query: 183 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE---PGNDPYAFLEFTCHXXX 353
+ + T+YVG LD V+E L L Q G V + ++ + + F+EF
Sbjct: 18 ERNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDA 77
Query: 354 XXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPF 533
+N + K +KVN A++ ++ D + IFVG+L PE++ +L + F+ F
Sbjct: 78 DYAIKILNMIKLYGKPIKVNKASA--HEKNMDVGAN--IFVGNLDPEVDEKLLYDTFSAF 133
Query: 534 GEISNC-RIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQ 656
G I +I+RD + SKG+AF++F ++ A++AMNGQ
Sbjct: 134 GVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQ 175
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 72.9 bits (171), Expect = 2e-13
Identities = 43/154 (27%), Positives = 75/154 (48%), Gaps = 3/154 (1%)
Frame = +3
Query: 201 TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGND---PYAFLEFTCHXXXXXXXXX 371
+LY+G+L P V+E L F G V ++ R+ + YA++ F
Sbjct: 58 SLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDT 117
Query: 372 MNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNC 551
MN V+ + M++ W+ P + + +IF+ +L I+ + + F+ FG I +C
Sbjct: 118 MNFEVIHGRPMRIMWSQ---RDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSC 174
Query: 552 RIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNG 653
++ D + SKGY FV F + A+ AI+ +NG
Sbjct: 175 KVATDDEG-NSKGYGFVHFETEHSAQTAIEKVNG 207
Score = 55.6 bits (128), Expect = 3e-08
Identities = 26/71 (36%), Positives = 42/71 (59%)
Frame = +3
Query: 438 PKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 617
P T + +++GDL P++ +L E F+ G + + R+ RD + S GYA+V+F +
Sbjct: 49 PPNATYSMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQP 108
Query: 618 ADAEAAIQAMN 650
ADAE A+ MN
Sbjct: 109 ADAERALDTMN 119
Score = 52.4 bits (120), Expect = 3e-07
Identities = 36/154 (23%), Positives = 69/154 (44%), Gaps = 5/154 (3%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREP-GNDP-YAFLEFTCHXXXXXXXXXMN 377
+++ NLD + + F G++ CK+ + GN Y F+ F +N
Sbjct: 147 IFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTAIEKVN 206
Query: 378 KRVVLDKEMKVNWATSPGNQPKT---DTSNHHHIFVGDLSPEIETNILREAFAPFGEISN 548
++ DK++ V + K + ++FV + ++ L F+ FGEI++
Sbjct: 207 GMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEITS 266
Query: 549 CRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMN 650
++ D Q K KG+ FV+F + A A++ +N
Sbjct: 267 AVVMTDAQG-KPKGFGFVAFADQDAAGQAVEKLN 299
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 72.9 bits (171), Expect = 2e-13
Identities = 43/154 (27%), Positives = 75/154 (48%), Gaps = 3/154 (1%)
Frame = +3
Query: 201 TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGND---PYAFLEFTCHXXXXXXXXX 371
+LY+G+L P V+E L F G V ++ R+ + YA++ F
Sbjct: 58 SLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDT 117
Query: 372 MNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNC 551
MN V+ + M++ W+ P + + +IF+ +L I+ + + F+ FG I +C
Sbjct: 118 MNFEVIHGRPMRIMWSQ---RDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSC 174
Query: 552 RIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNG 653
++ D + SKGY FV F + A+ AI+ +NG
Sbjct: 175 KVATDDEG-NSKGYGFVHFETEHSAQTAIEKVNG 207
Score = 55.6 bits (128), Expect = 3e-08
Identities = 26/71 (36%), Positives = 42/71 (59%)
Frame = +3
Query: 438 PKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 617
P T + +++GDL P++ +L E F+ G + + R+ RD + S GYA+V+F +
Sbjct: 49 PPNATYSMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQP 108
Query: 618 ADAEAAIQAMN 650
ADAE A+ MN
Sbjct: 109 ADAERALDTMN 119
Score = 52.4 bits (120), Expect = 3e-07
Identities = 36/154 (23%), Positives = 69/154 (44%), Gaps = 5/154 (3%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREP-GNDP-YAFLEFTCHXXXXXXXXXMN 377
+++ NLD + + F G++ CK+ + GN Y F+ F +N
Sbjct: 147 IFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTAIEKVN 206
Query: 378 KRVVLDKEMKVNWATSPGNQPKT---DTSNHHHIFVGDLSPEIETNILREAFAPFGEISN 548
++ DK++ V + K + ++FV + ++ L F+ FGEI++
Sbjct: 207 GMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEITS 266
Query: 549 CRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMN 650
++ D Q K KG+ FV+F + A A++ +N
Sbjct: 267 AVVMTDAQG-KPKGFGFVAFADQDAAGQAVEKLN 299
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 69.7 bits (163), Expect = 2e-12
Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 4/161 (2%)
Frame = +3
Query: 183 DESHPKT-LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP---YAFLEFTCHXX 350
D KT L + L +T+ + +LF IG+++ CK++R+ Y F+ +
Sbjct: 36 DIGESKTNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREED 95
Query: 351 XXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAP 530
N + +K +KV++A +P D +++V + + + L F P
Sbjct: 96 ALRAVSSFNGLRLQNKTIKVSYA-----RPSNDQIKGSNLYVSGIPKSMTLHELESIFRP 150
Query: 531 FGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNG 653
FG+I RI+ D T SKG FV F KK +A+ AI+ +NG
Sbjct: 151 FGQIITSRILSDNVTGLSKGVGFVRFDKKDEADVAIKTLNG 191
Score = 50.0 bits (114), Expect = 1e-06
Identities = 28/72 (38%), Positives = 45/72 (62%)
Frame = +3
Query: 438 PKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 617
P +DT+ + +FV +LS + + +L + F+ FG I N +I+RD T + KGYAFVS
Sbjct: 367 PPSDTAGYC-LFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRD-LTQQCKGYAFVSMSNY 424
Query: 618 ADAEAAIQAMNG 653
+A A+ ++NG
Sbjct: 425 TEAYNAMLSLNG 436
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 69.7 bits (163), Expect = 2e-12
Identities = 46/154 (29%), Positives = 70/154 (45%), Gaps = 3/154 (1%)
Frame = +3
Query: 201 TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGND---PYAFLEFTCHXXXXXXXXX 371
+LYVG+L P V E L F G V ++ R+ YA++ F
Sbjct: 33 SLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDT 92
Query: 372 MNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNC 551
MN + K M++ W+ P S +IF+ +L I+ + + F+ FG I +C
Sbjct: 93 MNFEALHGKPMRIMWSQ---RDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSC 149
Query: 552 RIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNG 653
++ D SKGY FV F + A+ AIQ +NG
Sbjct: 150 KVAIDEDGF-SKGYGFVHFETEEAAQNAIQKVNG 182
Score = 61.3 bits (142), Expect = 6e-10
Identities = 30/78 (38%), Positives = 44/78 (56%)
Frame = +3
Query: 417 ATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYA 596
A PG + ++VGDL P++ +IL E F+ G + + R+ RD T S GYA
Sbjct: 17 APQPGQNQTGSSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYA 76
Query: 597 FVSFVKKADAEAAIQAMN 650
+V+F + ADAE A+ MN
Sbjct: 77 YVNFQQPADAERAMDTMN 94
Score = 56.8 bits (131), Expect = 1e-08
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 5/154 (3%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKI-IREPG-NDPYAFLEFTCHXXXXXXXXXMN 377
+++ NLD + + F G++ CK+ I E G + Y F+ F +N
Sbjct: 122 IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVN 181
Query: 378 KRVVLDKEMKVN--WATSPGNQPKTDTSNHH-HIFVGDLSPEIETNILREAFAPFGEISN 548
++ K++ V + N+ +T+ +++V + L + FA FG I++
Sbjct: 182 GMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKVFAKFGNITS 241
Query: 549 CRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMN 650
C ++ KSKG+ FV+F +AE A+QA++
Sbjct: 242 CEVMTVEG--KSKGFGFVAFANPEEAETAVQALH 273
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 69.7 bits (163), Expect = 2e-12
Identities = 46/154 (29%), Positives = 70/154 (45%), Gaps = 3/154 (1%)
Frame = +3
Query: 201 TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGND---PYAFLEFTCHXXXXXXXXX 371
+LYVG+L P V E L F G V ++ R+ YA++ F
Sbjct: 33 SLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDT 92
Query: 372 MNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNC 551
MN + K M++ W+ P S +IF+ +L I+ + + F+ FG I +C
Sbjct: 93 MNFEALHGKPMRIMWSQ---RDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSC 149
Query: 552 RIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNG 653
++ D SKGY FV F + A+ AIQ +NG
Sbjct: 150 KVAIDEDGF-SKGYGFVHFETEEAAQNAIQKVNG 182
Score = 61.3 bits (142), Expect = 6e-10
Identities = 30/78 (38%), Positives = 44/78 (56%)
Frame = +3
Query: 417 ATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYA 596
A PG + ++VGDL P++ +IL E F+ G + + R+ RD T S GYA
Sbjct: 17 APQPGQNQTGSSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYA 76
Query: 597 FVSFVKKADAEAAIQAMN 650
+V+F + ADAE A+ MN
Sbjct: 77 YVNFQQPADAERAMDTMN 94
Score = 56.4 bits (130), Expect = 2e-08
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 5/154 (3%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKI-IREPG-NDPYAFLEFTCHXXXXXXXXXMN 377
+++ NLD + + F G++ CK+ I E G + Y F+ F +N
Sbjct: 122 IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVN 181
Query: 378 KRVVLDKEMKVN--WATSPGNQPKTDTSNHH-HIFVGDLSPEIETNILREAFAPFGEISN 548
++ K++ V + N+ +T+ +++V + L + FA FG I++
Sbjct: 182 GMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKLFAKFGNITS 241
Query: 549 CRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMN 650
C ++ KSKG+ FV+F +AE A+QA++
Sbjct: 242 CEVMTVEG--KSKGFGFVAFANPEEAETAVQALH 273
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 61.3 bits (142), Expect = 6e-10
Identities = 30/78 (38%), Positives = 44/78 (56%)
Frame = +3
Query: 417 ATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYA 596
A PG + ++VGDL P++ +IL E F+ G + + R+ RD T S GYA
Sbjct: 17 APQPGQNQTGSSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYA 76
Query: 597 FVSFVKKADAEAAIQAMN 650
+V+F + ADAE A+ MN
Sbjct: 77 YVNFQQPADAERAMDTMN 94
Score = 49.6 bits (113), Expect = 2e-06
Identities = 47/183 (25%), Positives = 74/183 (40%), Gaps = 33/183 (18%)
Frame = +3
Query: 201 TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGND---PYAFLEFTCHXXXXXXXXX 371
+LYVG+L P V E L F G V ++ R+ YA++ F
Sbjct: 33 SLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDT 92
Query: 372 MNKRVVLDKEMKVNWATSPGNQPKTDTSNHH-----HIFVGDLSPEIE------------ 500
MN + K M++ W+ ++ N +FVG P +
Sbjct: 93 MNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVFVGKFQPRAQRNRELGETAKQF 152
Query: 501 TNI-------------LREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQ 641
TN+ L + FA FG I++C ++ KSKG+ FV+F +AE A+Q
Sbjct: 153 TNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEG--KSKGFGFVAFANPEEAETAVQ 210
Query: 642 AMN 650
A++
Sbjct: 211 ALH 213
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 59.3 bits (137), Expect = 2e-09
Identities = 42/151 (27%), Positives = 65/151 (43%), Gaps = 2/151 (1%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMNKR 383
++VG + E LF + G V C I+R+ + C + +
Sbjct: 57 MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQAS---KGCCFVTFYHRKDAIEAQ 113
Query: 384 VVLDKEMKVNWATSPGNQPKTDTSNHHH--IFVGDLSPEIETNILREAFAPFGEISNCRI 557
L + P DT N + +F+G LS + LRE FA FG I +C +
Sbjct: 114 GALHNIKVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSV 173
Query: 558 VRDPQTLKSKGYAFVSFVKKADAEAAIQAMN 650
+RD Q KS+G AFV+F ++ A A + M+
Sbjct: 174 LRD-QDGKSRGCAFVTFTNRSCAVVATKEMH 203
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/73 (32%), Positives = 37/73 (50%)
Frame = +3
Query: 432 NQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFV 611
++P TD +FVG + + R F +G + +C I+RD T SKG FV+F
Sbjct: 48 SEPDTDAIK---MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFY 104
Query: 612 KKADAEAAIQAMN 650
+ DA A A++
Sbjct: 105 HRKDAIEAQGALH 117
Score = 41.9 bits (94), Expect = 4e-04
Identities = 23/63 (36%), Positives = 33/63 (52%)
Frame = +3
Query: 465 HIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQA 644
++F+ L + + L FAPFG I + ++ D T SK + FVS+ A AI A
Sbjct: 500 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 559
Query: 645 MNG 653
MNG
Sbjct: 560 MNG 562
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +3
Query: 183 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP--YAFLEFT 338
+ + + L++G L E L +F + G ++ C ++R+ AF+ FT
Sbjct: 137 ENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFT 190
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 59.3 bits (137), Expect = 2e-09
Identities = 42/151 (27%), Positives = 65/151 (43%), Gaps = 2/151 (1%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMNKR 383
++VG + E LF + G V C I+R+ + C + +
Sbjct: 57 MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQAS---KGCCFVTFYHRKDAIEAQ 113
Query: 384 VVLDKEMKVNWATSPGNQPKTDTSNHHH--IFVGDLSPEIETNILREAFAPFGEISNCRI 557
L + P DT N + +F+G LS + LRE FA FG I +C +
Sbjct: 114 GALHNIKVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSV 173
Query: 558 VRDPQTLKSKGYAFVSFVKKADAEAAIQAMN 650
+RD Q KS+G AFV+F ++ A A + M+
Sbjct: 174 LRD-QDGKSRGCAFVTFTNRSCAVVATKEMH 203
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/73 (32%), Positives = 37/73 (50%)
Frame = +3
Query: 432 NQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFV 611
++P TD +FVG + + R F +G + +C I+RD T SKG FV+F
Sbjct: 48 SEPDTDAIK---MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFY 104
Query: 612 KKADAEAAIQAMN 650
+ DA A A++
Sbjct: 105 HRKDAIEAQGALH 117
Score = 41.9 bits (94), Expect = 4e-04
Identities = 23/63 (36%), Positives = 33/63 (52%)
Frame = +3
Query: 465 HIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQA 644
++F+ L + + L FAPFG I + ++ D T SK + FVS+ A AI A
Sbjct: 500 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 559
Query: 645 MNG 653
MNG
Sbjct: 560 MNG 562
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +3
Query: 183 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP--YAFLEFT 338
+ + + L++G L E L +F + G ++ C ++R+ AF+ FT
Sbjct: 137 ENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFT 190
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 59.3 bits (137), Expect = 2e-09
Identities = 42/151 (27%), Positives = 65/151 (43%), Gaps = 2/151 (1%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMNKR 383
++VG + E LF + G V C I+R+ + C + +
Sbjct: 57 MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQAS---KGCCFVTFYHRKDAIEAQ 113
Query: 384 VVLDKEMKVNWATSPGNQPKTDTSNHHH--IFVGDLSPEIETNILREAFAPFGEISNCRI 557
L + P DT N + +F+G LS + LRE FA FG I +C +
Sbjct: 114 GALHNIKVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSV 173
Query: 558 VRDPQTLKSKGYAFVSFVKKADAEAAIQAMN 650
+RD Q KS+G AFV+F ++ A A + M+
Sbjct: 174 LRD-QDGKSRGCAFVTFTNRSCAVVATKEMH 203
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/73 (32%), Positives = 37/73 (50%)
Frame = +3
Query: 432 NQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFV 611
++P TD +FVG + + R F +G + +C I+RD T SKG FV+F
Sbjct: 48 SEPDTDAIK---MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFY 104
Query: 612 KKADAEAAIQAMN 650
+ DA A A++
Sbjct: 105 HRKDAIEAQGALH 117
Score = 41.9 bits (94), Expect = 4e-04
Identities = 23/63 (36%), Positives = 33/63 (52%)
Frame = +3
Query: 465 HIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQA 644
++F+ L + + L FAPFG I + ++ D T SK + FVS+ A AI A
Sbjct: 429 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 488
Query: 645 MNG 653
MNG
Sbjct: 489 MNG 491
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +3
Query: 183 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP--YAFLEFT 338
+ + + L++G L E L +F + G ++ C ++R+ AF+ FT
Sbjct: 137 ENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFT 190
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 59.3 bits (137), Expect = 2e-09
Identities = 42/151 (27%), Positives = 65/151 (43%), Gaps = 2/151 (1%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMNKR 383
++VG + E LF + G V C I+R+ + C + +
Sbjct: 57 MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQAS---KGCCFVTFYHRKDAIEAQ 113
Query: 384 VVLDKEMKVNWATSPGNQPKTDTSNHHH--IFVGDLSPEIETNILREAFAPFGEISNCRI 557
L + P DT N + +F+G LS + LRE FA FG I +C +
Sbjct: 114 GALHNIKVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSV 173
Query: 558 VRDPQTLKSKGYAFVSFVKKADAEAAIQAMN 650
+RD Q KS+G AFV+F ++ A A + M+
Sbjct: 174 LRD-QDGKSRGCAFVTFTNRSCAVVATKEMH 203
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/73 (32%), Positives = 37/73 (50%)
Frame = +3
Query: 432 NQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFV 611
++P TD +FVG + + R F +G + +C I+RD T SKG FV+F
Sbjct: 48 SEPDTDAIK---MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFY 104
Query: 612 KKADAEAAIQAMN 650
+ DA A A++
Sbjct: 105 HRKDAIEAQGALH 117
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +3
Query: 183 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP--YAFLEFT 338
+ + + L++G L E L +F + G ++ C ++R+ AF+ FT
Sbjct: 137 ENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFT 190
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 59.3 bits (137), Expect = 2e-09
Identities = 42/151 (27%), Positives = 65/151 (43%), Gaps = 2/151 (1%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMNKR 383
++VG + E LF + G V C I+R+ + C + +
Sbjct: 57 MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQAS---KGCCFVTFYHRKDAIEAQ 113
Query: 384 VVLDKEMKVNWATSPGNQPKTDTSNHHH--IFVGDLSPEIETNILREAFAPFGEISNCRI 557
L + P DT N + +F+G LS + LRE FA FG I +C +
Sbjct: 114 GALHNIKVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSV 173
Query: 558 VRDPQTLKSKGYAFVSFVKKADAEAAIQAMN 650
+RD Q KS+G AFV+F ++ A A + M+
Sbjct: 174 LRD-QDGKSRGCAFVTFTNRSCAVVATKEMH 203
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/73 (32%), Positives = 37/73 (50%)
Frame = +3
Query: 432 NQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFV 611
++P TD +FVG + + R F +G + +C I+RD T SKG FV+F
Sbjct: 48 SEPDTDAIK---MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFY 104
Query: 612 KKADAEAAIQAMN 650
+ DA A A++
Sbjct: 105 HRKDAIEAQGALH 117
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +3
Query: 183 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP--YAFLEFT 338
+ + + L++G L E L +F + G ++ C ++R+ AF+ FT
Sbjct: 137 ENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFT 190
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 59.3 bits (137), Expect = 2e-09
Identities = 42/151 (27%), Positives = 65/151 (43%), Gaps = 2/151 (1%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMNKR 383
++VG + E LF + G V C I+R+ + C + +
Sbjct: 57 MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQAS---KGCCFVTFYHRKDAIEAQ 113
Query: 384 VVLDKEMKVNWATSPGNQPKTDTSNHHH--IFVGDLSPEIETNILREAFAPFGEISNCRI 557
L + P DT N + +F+G LS + LRE FA FG I +C +
Sbjct: 114 GALHNIKVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSV 173
Query: 558 VRDPQTLKSKGYAFVSFVKKADAEAAIQAMN 650
+RD Q KS+G AFV+F ++ A A + M+
Sbjct: 174 LRD-QDGKSRGCAFVTFTNRSCAVVATKEMH 203
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/73 (32%), Positives = 37/73 (50%)
Frame = +3
Query: 432 NQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFV 611
++P TD +FVG + + R F +G + +C I+RD T SKG FV+F
Sbjct: 48 SEPDTDAIK---MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFY 104
Query: 612 KKADAEAAIQAMN 650
+ DA A A++
Sbjct: 105 HRKDAIEAQGALH 117
Score = 41.9 bits (94), Expect = 4e-04
Identities = 23/63 (36%), Positives = 33/63 (52%)
Frame = +3
Query: 465 HIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQA 644
++F+ L + + L FAPFG I + ++ D T SK + FVS+ A AI A
Sbjct: 500 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 559
Query: 645 MNG 653
MNG
Sbjct: 560 MNG 562
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +3
Query: 183 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP--YAFLEFT 338
+ + + L++G L E L +F + G ++ C ++R+ AF+ FT
Sbjct: 137 ENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFT 190
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 58.4 bits (135), Expect = 4e-09
Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 6/99 (6%)
Frame = +3
Query: 378 KRVVLDKEMKVNWATSPGNQPKTDTS------NHHHIFVGDLSPEIETNILREAFAPFGE 539
K+ + +++ K + S G Q D S N +F GDL E+ +L +AF +
Sbjct: 169 KKKIKEQQAKKKFVRSGGGQVWEDPSLAEWDENDFRVFCGDLGNEVSDELLAKAFRKYPS 228
Query: 540 ISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQ 656
++VR+ +T KSKGY FVSF D A++ M+G+
Sbjct: 229 FQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAMREMDGK 267
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 56.8 bits (131), Expect = 1e-08
Identities = 24/65 (36%), Positives = 43/65 (66%)
Frame = +3
Query: 447 DTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADA 626
+ N IFVG L+ +++RE ++ FGEI++ ++RDP T +S+G+ FV+F K +
Sbjct: 18 EPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEV 77
Query: 627 EAAIQ 641
+AA++
Sbjct: 78 DAAMK 82
Score = 43.6 bits (98), Expect = 1e-04
Identities = 26/140 (18%), Positives = 63/140 (45%), Gaps = 3/140 (2%)
Frame = +3
Query: 198 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMN 377
+ ++VG L + T+ + + Q G++ ++R+P F M
Sbjct: 23 RKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMK 82
Query: 378 KR--VVLDKEMKVNWATSPGNQPKTDTS-NHHHIFVGDLSPEIETNILREAFAPFGEISN 548
+R ++ K + A ++ +++++ + ++V + + ++L E F +G ++
Sbjct: 83 QRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTK 142
Query: 549 CRIVRDPQTLKSKGYAFVSF 608
I+ D T K +G+ FV+F
Sbjct: 143 SEIILDKATQKPRGFGFVTF 162
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 56.8 bits (131), Expect = 1e-08
Identities = 24/65 (36%), Positives = 43/65 (66%)
Frame = +3
Query: 447 DTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADA 626
+ N IFVG L+ +++RE ++ FGEI++ ++RDP T +S+G+ FV+F K +
Sbjct: 18 EPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEV 77
Query: 627 EAAIQ 641
+AA++
Sbjct: 78 DAAMK 82
Score = 43.6 bits (98), Expect = 1e-04
Identities = 26/140 (18%), Positives = 63/140 (45%), Gaps = 3/140 (2%)
Frame = +3
Query: 198 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMN 377
+ ++VG L + T+ + + Q G++ ++R+P F M
Sbjct: 23 RKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMK 82
Query: 378 KR--VVLDKEMKVNWATSPGNQPKTDTS-NHHHIFVGDLSPEIETNILREAFAPFGEISN 548
+R ++ K + A ++ +++++ + ++V + + ++L E F +G ++
Sbjct: 83 QRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTK 142
Query: 549 CRIVRDPQTLKSKGYAFVSF 608
I+ D T K +G+ FV+F
Sbjct: 143 SEIILDKATQKPRGFGFVTF 162
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 56.8 bits (131), Expect = 1e-08
Identities = 24/65 (36%), Positives = 43/65 (66%)
Frame = +3
Query: 447 DTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADA 626
+ N IFVG L+ +++RE ++ FGEI++ ++RDP T +S+G+ FV+F K +
Sbjct: 18 EPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEV 77
Query: 627 EAAIQ 641
+AA++
Sbjct: 78 DAAMK 82
Score = 43.6 bits (98), Expect = 1e-04
Identities = 26/140 (18%), Positives = 63/140 (45%), Gaps = 3/140 (2%)
Frame = +3
Query: 198 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMN 377
+ ++VG L + T+ + + Q G++ ++R+P F M
Sbjct: 23 RKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMK 82
Query: 378 KR--VVLDKEMKVNWATSPGNQPKTDTS-NHHHIFVGDLSPEIETNILREAFAPFGEISN 548
+R ++ K + A ++ +++++ + ++V + + ++L E F +G ++
Sbjct: 83 QRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTK 142
Query: 549 CRIVRDPQTLKSKGYAFVSF 608
I+ D T K +G+ FV+F
Sbjct: 143 SEIILDKATQKPRGFGFVTF 162
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 56.4 bits (130), Expect = 2e-08
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 5/154 (3%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKI-IREPG-NDPYAFLEFTCHXXXXXXXXXMN 377
+++ NLD + + F G++ CK+ I E G + Y F+ F +N
Sbjct: 59 IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVN 118
Query: 378 KRVVLDKEMKVN--WATSPGNQPKTDTSNHH-HIFVGDLSPEIETNILREAFAPFGEISN 548
++ K++ V + N+ +T+ +++V + L + FA FG I++
Sbjct: 119 GMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKLFAKFGNITS 178
Query: 549 CRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMN 650
C ++ KSKG+ FV+F +AE A+QA++
Sbjct: 179 CEVMTVEG--KSKGFGFVAFANPEEAETAVQALH 210
Score = 51.6 bits (118), Expect = 5e-07
Identities = 30/94 (31%), Positives = 47/94 (50%)
Frame = +3
Query: 372 MNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNC 551
MN + K M++ W+ P S +IF+ +L I+ + + F+ FG I +C
Sbjct: 30 MNFEALHGKPMRIMWSQ---RDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSC 86
Query: 552 RIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNG 653
++ D SKGY FV F + A+ AIQ +NG
Sbjct: 87 KVAIDEDGF-SKGYGFVHFETEEAAQNAIQKVNG 119
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 54.8 bits (126), Expect = 5e-08
Identities = 38/166 (22%), Positives = 68/166 (40%), Gaps = 17/166 (10%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPG---NDPYAFLEFTCHXXXXXXXXXM 374
+YVG++ + E L F G +K + +P + +AF+E+ M
Sbjct: 104 IYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESM 163
Query: 375 NKRVVLDKEMKVNWATS-----PGNQPKT---------DTSNHHHIFVGDLSPEIETNIL 512
N +++ + +KVN P N P+ D + ++V + P++ L
Sbjct: 164 NGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSETDL 223
Query: 513 REAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMN 650
+ F FGEI C++ R P +G+ ++ F AI MN
Sbjct: 224 KSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMN 269
Score = 50.8 bits (116), Expect = 8e-07
Identities = 27/63 (42%), Positives = 37/63 (58%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 647
I+VG +S EI ++LR AF PFG I + + DP T K +AFV + A A ++M
Sbjct: 104 IYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESM 163
Query: 648 NGQ 656
NGQ
Sbjct: 164 NGQ 166
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 54.8 bits (126), Expect = 5e-08
Identities = 38/166 (22%), Positives = 68/166 (40%), Gaps = 17/166 (10%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPG---NDPYAFLEFTCHXXXXXXXXXM 374
+YVG++ + E L F G +K + +P + +AF+E+ M
Sbjct: 104 IYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESM 163
Query: 375 NKRVVLDKEMKVNWATS-----PGNQPKT---------DTSNHHHIFVGDLSPEIETNIL 512
N +++ + +KVN P N P+ D + ++V + P++ L
Sbjct: 164 NGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSETDL 223
Query: 513 REAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMN 650
+ F FGEI C++ R P +G+ ++ F AI MN
Sbjct: 224 KSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMN 269
Score = 50.8 bits (116), Expect = 8e-07
Identities = 27/63 (42%), Positives = 37/63 (58%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 647
I+VG +S EI ++LR AF PFG I + + DP T K +AFV + A A ++M
Sbjct: 104 IYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESM 163
Query: 648 NGQ 656
NGQ
Sbjct: 164 NGQ 166
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 54.8 bits (126), Expect = 5e-08
Identities = 38/166 (22%), Positives = 68/166 (40%), Gaps = 17/166 (10%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPG---NDPYAFLEFTCHXXXXXXXXXM 374
+YVG++ + E L F G +K + +P + +AF+E+ M
Sbjct: 104 IYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESM 163
Query: 375 NKRVVLDKEMKVNWATS-----PGNQPKT---------DTSNHHHIFVGDLSPEIETNIL 512
N +++ + +KVN P N P+ D + ++V + P++ L
Sbjct: 164 NGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSETDL 223
Query: 513 REAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMN 650
+ F FGEI C++ R P +G+ ++ F AI MN
Sbjct: 224 KSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMN 269
Score = 50.8 bits (116), Expect = 8e-07
Identities = 27/63 (42%), Positives = 37/63 (58%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 647
I+VG +S EI ++LR AF PFG I + + DP T K +AFV + A A ++M
Sbjct: 104 IYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESM 163
Query: 648 NGQ 656
NGQ
Sbjct: 164 NGQ 166
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 52.8 bits (121), Expect = 2e-07
Identities = 23/81 (28%), Positives = 45/81 (55%)
Frame = +3
Query: 396 KEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQT 575
+E ++N + G+ D +F+G LS + LR+ F FGE++ C ++RDP T
Sbjct: 26 EEARLNADSDDGSHGSQDPGK---MFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPAT 82
Query: 576 LKSKGYAFVSFVKKADAEAAI 638
+++G+ F++FV + + +
Sbjct: 83 KRARGFGFITFVDPSSVDKVL 103
Score = 50.8 bits (116), Expect = 8e-07
Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 6/152 (3%)
Frame = +3
Query: 171 ANMGDESH----PKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFT 338
A+ D SH P +++G L T L FG+ G+V C ++R+P F
Sbjct: 32 ADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFI 91
Query: 339 CHXXXXXXXXXMNKRV-VLD-KEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNIL 512
+N R LD K++ A Q K T +F+G LS +
Sbjct: 92 TFVDPSSVDKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKT-KKVFIGGLSATSTLEDM 150
Query: 513 REAFAPFGEISNCRIVRDPQTLKSKGYAFVSF 608
++ F +G++ + ++ D T + +G+ FV+F
Sbjct: 151 KQYFETYGKVEDAMLMFDKATQRHRGFGFVTF 182
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 52.8 bits (121), Expect = 2e-07
Identities = 23/81 (28%), Positives = 45/81 (55%)
Frame = +3
Query: 396 KEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQT 575
+E ++N + G+ D +F+G LS + LR+ F FGE++ C ++RDP T
Sbjct: 26 EEARLNADSDDGSHGSQDPGK---MFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPAT 82
Query: 576 LKSKGYAFVSFVKKADAEAAI 638
+++G+ F++FV + + +
Sbjct: 83 KRARGFGFITFVDPSSVDKVL 103
Score = 50.8 bits (116), Expect = 8e-07
Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 6/152 (3%)
Frame = +3
Query: 171 ANMGDESH----PKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFT 338
A+ D SH P +++G L T L FG+ G+V C ++R+P F
Sbjct: 32 ADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFI 91
Query: 339 CHXXXXXXXXXMNKRV-VLD-KEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNIL 512
+N R LD K++ A Q K T +F+G LS +
Sbjct: 92 TFVDPSSVDKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKT-KKVFIGGLSATSTLEDM 150
Query: 513 REAFAPFGEISNCRIVRDPQTLKSKGYAFVSF 608
++ F +G++ + ++ D T + +G+ FV+F
Sbjct: 151 KQYFETYGKVEDAMLMFDKATQRHRGFGFVTF 182
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 51.2 bits (117), Expect = 6e-07
Identities = 22/62 (35%), Positives = 38/62 (61%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 647
+FVG++S ++ + +R F+ G + + ++V D +T K KGY F+ F AE AI+ +
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIRNL 79
Query: 648 NG 653
NG
Sbjct: 80 NG 81
>U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical
protein C18A3.5c protein.
Length = 103
Score = 49.6 bits (113), Expect = 2e-06
Identities = 25/41 (60%), Positives = 29/41 (70%)
Frame = +3
Query: 174 NMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKII 296
N DE P+TLYVGNLD +VTE F+ TLF QIG V K+I
Sbjct: 40 NGSDE--PRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVI 78
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/64 (35%), Positives = 38/64 (59%)
Frame = +3
Query: 462 HHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQ 641
H I+VG + ++ + L F G+I + R++ DP + S+GYAFV++ K DA AA +
Sbjct: 200 HEIYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTYCNKEDAAAAAK 259
Query: 642 AMNG 653
+G
Sbjct: 260 TYDG 263
Score = 29.9 bits (64), Expect = 1.7
Identities = 24/119 (20%), Positives = 51/119 (42%), Gaps = 3/119 (2%)
Frame = +3
Query: 309 NDPYAFLEFTCHXXXXXXXXXMNKRVV--LDKEMKVNWATSPGNQPKTDT-SNHHHIFVG 479
N + F++F H + + + + ++ V+WA +P DT S +++
Sbjct: 324 NRGFCFVDFIDHKTASDIKRKIAQHKIRPFNADVYVDWAEHQ-EEPDEDTMSKVKVLYIR 382
Query: 480 DLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQ 656
++ + L E F + + + V+D YAF+ F ++ D A++ NG+
Sbjct: 383 NIKEAVTEEKLNELFKEYASLDRVKKVKD--------YAFIHFNERDDCLKAMEEWNGK 433
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 48.8 bits (111), Expect = 3e-06
Identities = 21/62 (33%), Positives = 38/62 (61%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 647
++VG+ + L F+ G+I+N RIV D +T + +G+AF+ F ++ A+ A++ M
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQM 66
Query: 648 NG 653
NG
Sbjct: 67 NG 68
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 47.6 bits (108), Expect = 8e-06
Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 8/158 (5%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPY---AFLEFTCHXXXXXXXXXM 374
L+VG + ++ E L LF Q G + I+++ + AFL + +
Sbjct: 31 LFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQATL 90
Query: 375 NKRVVL---DKEMKVNWATSPGN--QPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGE 539
+ + L ++ M+V A + PK D + +F+G LS + + +R FA FGE
Sbjct: 91 HDQKTLPGMNRAMQVKPADTDSRPASPK-DKMDDKKLFIGMLSKQQSEDEVRALFATFGE 149
Query: 540 ISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNG 653
+ ++R SKG AFV + DA AI A++G
Sbjct: 150 LDEVTVLRGADG-ASKGCAFVKYKHGLDAHMAISALHG 186
Score = 44.8 bits (101), Expect = 5e-05
Identities = 24/63 (38%), Positives = 36/63 (57%)
Frame = +3
Query: 465 HIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQA 644
++F+ L E L + FAPFG I + ++ D T +SK + FVS+ ++AAI A
Sbjct: 430 NLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITA 489
Query: 645 MNG 653
MNG
Sbjct: 490 MNG 492
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 47.6 bits (108), Expect = 8e-06
Identities = 21/62 (33%), Positives = 39/62 (62%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 647
++VG++ + + FA G ++N RIV D +T + +G+AFV F ++A A+ A++ +
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQL 67
Query: 648 NG 653
NG
Sbjct: 68 NG 69
Score = 31.5 bits (68), Expect = 0.54
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Frame = +3
Query: 201 TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKII--REPGND-PYAFLEFTCHXXXXXXXXX 371
++YVGN+ TE + F +G V +I+ RE G +AF+EF+
Sbjct: 7 SVYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQ 66
Query: 372 MNKRVVLDKEMKVNWA 419
+N + ++VN+A
Sbjct: 67 LNGVAFNGRNLRVNYA 82
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 47.6 bits (108), Expect = 8e-06
Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 8/158 (5%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPY---AFLEFTCHXXXXXXXXXM 374
L+VG + ++ E L LF Q G + I+++ + AFL + +
Sbjct: 31 LFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQATL 90
Query: 375 NKRVVL---DKEMKVNWATSPGN--QPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGE 539
+ + L ++ M+V A + PK D + +F+G LS + + +R FA FGE
Sbjct: 91 HDQKTLPGMNRAMQVKPADTDSRPASPK-DKMDDKKLFIGMLSKQQSEDEVRALFATFGE 149
Query: 540 ISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNG 653
+ ++R SKG AFV + DA AI A++G
Sbjct: 150 LDEVTVLRGADG-ASKGCAFVKYKHGLDAHMAISALHG 186
Score = 44.8 bits (101), Expect = 5e-05
Identities = 24/63 (38%), Positives = 36/63 (57%)
Frame = +3
Query: 465 HIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQA 644
++F+ L E L + FAPFG I + ++ D T +SK + FVS+ ++AAI A
Sbjct: 430 NLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITA 489
Query: 645 MNG 653
MNG
Sbjct: 490 MNG 492
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/61 (36%), Positives = 36/61 (59%)
Frame = +3
Query: 474 VGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNG 653
+ +LS + N LR F +G+I + I RD + +SKG+ FV F ++ DAE A+ +G
Sbjct: 23 IDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDG 82
Query: 654 Q 656
+
Sbjct: 83 K 83
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/61 (36%), Positives = 36/61 (59%)
Frame = +3
Query: 474 VGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNG 653
+ +LS + N LR F +G+I + I RD + +SKG+ FV F ++ DAE A+ +G
Sbjct: 23 IDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDG 82
Query: 654 Q 656
+
Sbjct: 83 K 83
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 47.2 bits (107), Expect = 1e-05
Identities = 35/131 (26%), Positives = 53/131 (40%), Gaps = 2/131 (1%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMNKR 383
++VG + E LF + G V C I+R+ + C + +
Sbjct: 57 MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQAS---KGCCFVTFYHRKDAIEAQ 113
Query: 384 VVLDKEMKVNWATSPGNQPKTDTSNHHH--IFVGDLSPEIETNILREAFAPFGEISNCRI 557
L + P DT N + +F+G LS + LRE FA FG I +C +
Sbjct: 114 GALHNIKVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSV 173
Query: 558 VRDPQTLKSKG 590
+RD Q KS+G
Sbjct: 174 LRD-QDGKSRG 183
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/73 (32%), Positives = 37/73 (50%)
Frame = +3
Query: 432 NQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFV 611
++P TD +FVG + + R F +G + +C I+RD T SKG FV+F
Sbjct: 48 SEPDTDAIK---MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFY 104
Query: 612 KKADAEAAIQAMN 650
+ DA A A++
Sbjct: 105 HRKDAIEAQGALH 117
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/53 (20%), Positives = 23/53 (43%)
Frame = +3
Query: 183 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTC 341
+ + + L++G L E L +F + G ++ C ++R+ L C
Sbjct: 137 ENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGMLSAAC 189
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/62 (35%), Positives = 37/62 (59%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 647
++VG+ + + L F+ G +SN RIV D +T + +G+AFV F ++A A+ A+
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQF 65
Query: 648 NG 653
NG
Sbjct: 66 NG 67
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 46.8 bits (106), Expect = 1e-05
Identities = 25/73 (34%), Positives = 42/73 (57%)
Frame = +3
Query: 438 PKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 617
PK + +FVG+L E++ L+E F+P G+I+ C L KG+AF+ +
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAEC-------YLSGKGFAFLRLDTR 160
Query: 618 ADAEAAIQAMNGQ 656
A AE+A +A++G+
Sbjct: 161 AHAESAKEAIDGR 173
Score = 41.9 bits (94), Expect = 4e-04
Identities = 36/148 (24%), Positives = 63/148 (42%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMNKR 383
L+VGNL V E L LF GD+ C + +AFL ++ R
Sbjct: 118 LFVGNLPNEVKETELKELFSPHGDIAECYL----SGKGFAFLRLDTRAHAESAKEAIDGR 173
Query: 384 VVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
++ ++++V +A + I V +LSP + +L AF+ FG++ +
Sbjct: 174 IIHGRQVRVRFAV-----------HGAAIRVKELSPTVSNEMLYHAFSHFGDVERAVHIV 222
Query: 564 DPQTLKSKGYAFVSFVKKADAEAAIQAM 647
D + + G V F +K + A+ A+
Sbjct: 223 DEKG-RPTGEGIVEFERKPNCNEAMAAI 249
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 46.8 bits (106), Expect = 1e-05
Identities = 25/73 (34%), Positives = 42/73 (57%)
Frame = +3
Query: 438 PKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 617
PK + +FVG+L E++ L+E F+P G+I+ C L KG+AF+ +
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAEC-------YLSGKGFAFLRLDTR 160
Query: 618 ADAEAAIQAMNGQ 656
A AE+A +A++G+
Sbjct: 161 AHAESAKEAIDGR 173
Score = 41.9 bits (94), Expect = 4e-04
Identities = 36/148 (24%), Positives = 63/148 (42%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMNKR 383
L+VGNL V E L LF GD+ C + +AFL ++ R
Sbjct: 118 LFVGNLPNEVKETELKELFSPHGDIAECYL----SGKGFAFLRLDTRAHAESAKEAIDGR 173
Query: 384 VVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVR 563
++ ++++V +A + I V +LSP + +L AF+ FG++ +
Sbjct: 174 IIHGRQVRVRFAV-----------HGAAIRVKELSPTVSNEMLYHAFSHFGDVERAVHIV 222
Query: 564 DPQTLKSKGYAFVSFVKKADAEAAIQAM 647
D + + G V F +K + A+ A+
Sbjct: 223 DEKG-RPTGEGIVEFERKPNCNEAMAAI 249
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 46.8 bits (106), Expect = 1e-05
Identities = 24/61 (39%), Positives = 31/61 (50%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 647
IFVG L L E F FG+I ++ D T KS+GY FV+ +A AE A +
Sbjct: 37 IFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKDP 96
Query: 648 N 650
N
Sbjct: 97 N 97
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 46.8 bits (106), Expect = 1e-05
Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 3/149 (2%)
Frame = +3
Query: 198 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP---YAFLEFTCHXXXXXXXX 368
K ++VG + P V L + F Q G+V ++ + N +AF+EFT
Sbjct: 29 KKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTT-GEGCKLAL 87
Query: 369 XMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISN 548
++ + K ++V A S N+ +FVG L + LR F FG++ +
Sbjct: 88 AAREQTIKGKSVEVKPAKSRENKK---------VFVGGLPSDYSEQDLRSHFEQFGKVDD 138
Query: 549 CRIVRDPQTLKSKGYAFVSFVKKADAEAA 635
D QT + +AF+ F ++ A+ A
Sbjct: 139 IEWPFDKQTKARRNFAFIVFEEEESADKA 167
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/71 (30%), Positives = 35/71 (49%)
Frame = +3
Query: 432 NQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFV 611
N T + IFVG +SPE+ L F +GE++ ++ D +S+G+AFV F
Sbjct: 19 NGHSTKGNEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFT 78
Query: 612 KKADAEAAIQA 644
+ A+ A
Sbjct: 79 TGEGCKLALAA 89
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 46.8 bits (106), Expect = 1e-05
Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 3/149 (2%)
Frame = +3
Query: 198 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP---YAFLEFTCHXXXXXXXX 368
K ++VG + P V L + F Q G+V ++ + N +AF+EFT
Sbjct: 29 KKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTT-GEGCKLAL 87
Query: 369 XMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISN 548
++ + K ++V A S N+ +FVG L + LR F FG++ +
Sbjct: 88 AAREQTIKGKSVEVKPAKSRENKK---------VFVGGLPSDYSEQDLRSHFEQFGKVDD 138
Query: 549 CRIVRDPQTLKSKGYAFVSFVKKADAEAA 635
D QT + +AF+ F ++ A+ A
Sbjct: 139 IEWPFDKQTKARRNFAFIVFEEEESADKA 167
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/71 (30%), Positives = 35/71 (49%)
Frame = +3
Query: 432 NQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFV 611
N T + IFVG +SPE+ L F +GE++ ++ D +S+G+AFV F
Sbjct: 19 NGHSTKGNEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFT 78
Query: 612 KKADAEAAIQA 644
+ A+ A
Sbjct: 79 TGEGCKLALAA 89
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 335 YVSHGGGHSAGRHEQASGPRQGNEG 409
Y S G +S ++QA G RQGN G
Sbjct: 266 YQSFAGNNSGFDYQQAQGARQGNNG 290
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 46.4 bits (105), Expect = 2e-05
Identities = 18/44 (40%), Positives = 33/44 (75%)
Frame = +3
Query: 510 LREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQ 641
+RE ++ FGEI++ ++RDP T +S+G+ FV+F K + +AA++
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMK 44
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 46.4 bits (105), Expect = 2e-05
Identities = 18/44 (40%), Positives = 33/44 (75%)
Frame = +3
Query: 510 LREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQ 641
+RE ++ FGEI++ ++RDP T +S+G+ FV+F K + +AA++
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMK 44
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/77 (28%), Positives = 39/77 (50%)
Frame = +3
Query: 423 SPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFV 602
+P P+ + +FVG ++ E + LR F +G+I +V D + K +GYAF+
Sbjct: 91 NPAENPRASEDPYRTLFVGRINYETSESKLRREFEAYGKIKKLTMVHD-EAGKPRGYAFI 149
Query: 603 SFVKKADAEAAIQAMNG 653
+ KA+ A + +G
Sbjct: 150 EYSDKAEMHTAYKKADG 166
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 45.6 bits (103), Expect = 3e-05
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Frame = +3
Query: 420 TSP-GNQPKTDTS--NHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKG 590
T+P G+Q D++ + ++++ L P ++LRE + +G I++ + + D T KG
Sbjct: 64 TAPRGDQQHHDSTPLSSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKG 123
Query: 591 YAFVSFVKKADAEAAIQAMN 650
Y FV F A AA+ +N
Sbjct: 124 YGFVDFESPQAAAAAVDGLN 143
Score = 39.5 bits (88), Expect = 0.002
Identities = 34/153 (22%), Positives = 62/153 (40%), Gaps = 3/153 (1%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP---YAFLEFTCHXXXXXXXXXM 374
LY+ L P+ + L + + G++ K I + + Y F++F +
Sbjct: 83 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAAVDGL 142
Query: 375 NKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCR 554
N V + K+ Q + D +N +++ +L + +L FG + + R
Sbjct: 143 NTEGVQAQMAKLQ-------QQEQDPTN---LYIANLPLDFTEQMLETELNKFGMVISTR 192
Query: 555 IVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNG 653
I+R P +S+G F K E I A+NG
Sbjct: 193 ILRTPDN-QSRGVGFARMDSKEKCEVIISALNG 224
Score = 31.1 bits (67), Expect = 0.72
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +3
Query: 186 ESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGN 311
E P LY+ NL TE L T + G V +I+R P N
Sbjct: 158 EQDPTNLYIANLPLDFTEQMLETELNKFGMVISTRILRTPDN 199
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 45.6 bits (103), Expect = 3e-05
Identities = 20/62 (32%), Positives = 34/62 (54%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 647
I++G LS + + F+ +GE+ N ++RD T KSKG+AF+ + + A+
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDNF 99
Query: 648 NG 653
NG
Sbjct: 100 NG 101
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCH 344
+Y+G L +++E + +F Q G+V +IR+ F C+
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCY 86
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 45.2 bits (102), Expect = 4e-05
Identities = 20/67 (29%), Positives = 35/67 (52%)
Frame = +3
Query: 450 TSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAE 629
T + ++++ L P ++LRE + +G I++ + + D T KGY FV F A
Sbjct: 103 TPSSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAA 162
Query: 630 AAIQAMN 650
AA+ +N
Sbjct: 163 AAVDGLN 169
Score = 39.9 bits (89), Expect = 0.002
Identities = 35/164 (21%), Positives = 64/164 (39%), Gaps = 3/164 (1%)
Frame = +3
Query: 171 ANMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP---YAFLEFTC 341
+N LY+ L P+ + L + + G++ K I + + Y F++F
Sbjct: 98 SNFNTTPSSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFES 157
Query: 342 HXXXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREA 521
+N V + K+ Q + D +N +++ +L + +L
Sbjct: 158 PQAAAAAVDGLNTEGVQAQMAKLQ-------QQEQDPTN---LYIANLPLDFTEQMLETE 207
Query: 522 FAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNG 653
FG + + RI+R P +S+G F K E I A+NG
Sbjct: 208 LNKFGMVISTRILRTPDN-QSRGVGFARMDSKEKCEVIISALNG 250
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 45.2 bits (102), Expect = 4e-05
Identities = 21/61 (34%), Positives = 33/61 (54%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 647
++VG + ++ +L AF PFG++ I D ++ K +G+ FV F DA AI M
Sbjct: 13 LYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDNM 72
Query: 648 N 650
N
Sbjct: 73 N 73
Score = 36.3 bits (80), Expect = 0.019
Identities = 26/80 (32%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Frame = +3
Query: 198 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIR--EPG-NDPYAFLEFTCHXXXXXXXX 368
+TLYVG VTE L F GDV I E G + + F+EF
Sbjct: 11 RTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAID 70
Query: 369 XMNKRVVLDKEMKVNWATSP 428
MN+ + K ++VN+A P
Sbjct: 71 NMNESELFGKTIRVNFARPP 90
>Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical
protein T11G6.8 protein.
Length = 408
Score = 44.4 bits (100), Expect = 7e-05
Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Frame = +3
Query: 201 TLYVGNLDPS----VTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTC-HXXXXXXX 365
TLY+GNL PS VTE L F Q GD++ +++ E G AF+EFT
Sbjct: 236 TLYIGNLGPSGAQQVTEKDLNDFFYQYGDIRCLRVLTEKG---CAFIEFTTREAAERAAE 292
Query: 366 XXMNKRVVLDKEMKVNWATSPGNQPKTDTSNH 461
NK + K + + W P + D SN+
Sbjct: 293 RSFNKTFIKGKRLTIRWG-EPQAKRAADNSNY 323
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/74 (33%), Positives = 37/74 (50%)
Frame = +3
Query: 429 GNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSF 608
G Q + S+ + V +L E+ + LR+ F G + I RD T KG+AFV+F
Sbjct: 165 GRQIDRNRSDENTCRVTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTF 224
Query: 609 VKKADAEAAIQAMN 650
+ DA AI +N
Sbjct: 225 ESRDDAARAIAELN 238
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/57 (33%), Positives = 33/57 (57%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAI 638
+F+G LS + L F+ +G + + ++RDP T S+G+ FV+F AE+A+
Sbjct: 51 LFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAM 107
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/57 (33%), Positives = 33/57 (57%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAI 638
+F+G LS + L F+ +G + + ++RDP T S+G+ FV+F AE+A+
Sbjct: 71 LFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAM 127
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/57 (33%), Positives = 33/57 (57%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAI 638
+F+G LS + L F+ +G + + ++RDP T S+G+ FV+F AE+A+
Sbjct: 72 LFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAM 128
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 42.7 bits (96), Expect = 2e-04
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAF-APFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAI 638
IFVG+L EI + L F A G + RIVRD T K KG+AFV+F + + A+
Sbjct: 248 IFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVSLAL 305
Score = 30.7 bits (66), Expect = 0.95
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +3
Query: 204 LYVGNLDPSVTEVFLCTLF-GQIGDVKGCKIIREPGNDP---YAFLEF 335
++VGNL +TE L T F QIG V+ +I+R+ +AF+ F
Sbjct: 248 IFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNF 295
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 42.3 bits (95), Expect = 3e-04
Identities = 23/61 (37%), Positives = 32/61 (52%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 647
+FV L+P L F+ FG+I+NC IVRD ++ S YAF+ F E A M
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 302
Query: 648 N 650
+
Sbjct: 303 D 303
Score = 36.7 bits (81), Expect = 0.014
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Frame = +3
Query: 183 DESHPKT-LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE--PGND-PYAFLEFTCHXX 350
DE P+ L+V L+P T+ L +F + G + C+I+R+ G+ YAF+EF
Sbjct: 235 DEVPPENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKS 294
Query: 351 XXXXXXXMNKRVVLDKEMKVNWATS 425
M+ ++ D+ + V+++ S
Sbjct: 295 CEQAFFKMDNVLIDDRRIHVDFSQS 319
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 42.3 bits (95), Expect = 3e-04
Identities = 23/61 (37%), Positives = 32/61 (52%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 647
+FV L+P L F+ FG+I+NC IVRD ++ S YAF+ F E A M
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 302
Query: 648 N 650
+
Sbjct: 303 D 303
Score = 36.7 bits (81), Expect = 0.014
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Frame = +3
Query: 183 DESHPKT-LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE--PGND-PYAFLEFTCHXX 350
DE P+ L+V L+P T+ L +F + G + C+I+R+ G+ YAF+EF
Sbjct: 235 DEVPPENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKS 294
Query: 351 XXXXXXXMNKRVVLDKEMKVNWATS 425
M+ ++ D+ + V+++ S
Sbjct: 295 CEQAFFKMDNVLIDDRRIHVDFSQS 319
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 42.3 bits (95), Expect = 3e-04
Identities = 23/61 (37%), Positives = 32/61 (52%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 647
+FV L+P L F+ FG+I+NC IVRD ++ S YAF+ F E A M
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 233
Query: 648 N 650
+
Sbjct: 234 D 234
Score = 36.7 bits (81), Expect = 0.014
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Frame = +3
Query: 183 DESHPKT-LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE--PGND-PYAFLEFTCHXX 350
DE P+ L+V L+P T+ L +F + G + C+I+R+ G+ YAF+EF
Sbjct: 166 DEVPPENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKS 225
Query: 351 XXXXXXXMNKRVVLDKEMKVNWATS 425
M+ ++ D+ + V+++ S
Sbjct: 226 CEQAFFKMDNVLIDDRRIHVDFSQS 250
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 41.9 bits (94), Expect = 4e-04
Identities = 23/63 (36%), Positives = 33/63 (52%)
Frame = +3
Query: 465 HIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQA 644
++F+ L + + L FAPFG I + ++ D T SK + FVS+ A AI A
Sbjct: 336 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 395
Query: 645 MNG 653
MNG
Sbjct: 396 MNG 398
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/44 (43%), Positives = 27/44 (61%)
Frame = +3
Query: 522 FAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNG 653
F FG + R+ R+ +T KG+A+V F KA AE A ++MNG
Sbjct: 52 FRQFGNVLRIRVARNRRTGNHKGWAYVGFDNKAVAEIAAESMNG 95
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/76 (27%), Positives = 41/76 (53%)
Frame = +3
Query: 423 SPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFV 602
+PGN+ T H+ V +L P+I+ ++R+ F FG I + D +++G+A +
Sbjct: 120 APGNKGPT------HVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVD-SNRENRGFATI 172
Query: 603 SFVKKADAEAAIQAMN 650
+F DA+ + + +N
Sbjct: 173 TFRNADDAQKSCEQLN 188
Score = 33.9 bits (74), Expect = 0.10
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +3
Query: 510 LREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQ 656
L E F+ G + + RI+ D +T +SKG +V F + + A+NGQ
Sbjct: 41 LEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLGL-ALNGQ 88
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/76 (27%), Positives = 41/76 (53%)
Frame = +3
Query: 423 SPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFV 602
+PGN+ T H+ V +L P+I+ ++R+ F FG I + D +++G+A +
Sbjct: 265 APGNKGPT------HVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVD-SNRENRGFATI 317
Query: 603 SFVKKADAEAAIQAMN 650
+F DA+ + + +N
Sbjct: 318 TFRNADDAQKSCEQLN 333
Score = 33.9 bits (74), Expect = 0.10
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +3
Query: 510 LREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQ 656
L E F+ G + + RI+ D +T +SKG +V F + + A+NGQ
Sbjct: 186 LEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLGL-ALNGQ 233
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/54 (38%), Positives = 29/54 (53%)
Frame = +3
Query: 474 VGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAA 635
V +LS LR+ F FGEI+ C +V D + S+G+ F+ F DA AA
Sbjct: 80 VFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAA 133
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/62 (33%), Positives = 35/62 (56%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 647
+F+ +L + + L+ F +GE+S ++V D +T KG+A V FV A AA A+
Sbjct: 281 LFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEAAVAAYSAL 340
Query: 648 NG 653
+G
Sbjct: 341 DG 342
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = +3
Query: 438 PKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 617
PK + +FVG+L E++ L+E F+P G+I+ C L KG+AF+ +
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAEC-------YLSGKGFAFLRLISN 160
Query: 618 A 620
A
Sbjct: 161 A 161
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 37.1 bits (82), Expect = 0.011
Identities = 21/62 (33%), Positives = 32/62 (51%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 647
++VG L + + L E F FG I + R P G+AFV + DAE A++A+
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPP-----GFAFVEYDDVRDAEDAVRAL 59
Query: 648 NG 653
+G
Sbjct: 60 DG 61
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 37.1 bits (82), Expect = 0.011
Identities = 21/62 (33%), Positives = 32/62 (51%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 647
++VG L + + L E F FG I + R P G+AFV + DAE A++A+
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPP-----GFAFVEYDDVRDAEDAVRAL 59
Query: 648 NG 653
+G
Sbjct: 60 DG 61
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 37.1 bits (82), Expect = 0.011
Identities = 21/62 (33%), Positives = 32/62 (51%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 647
++VG L + + L E F FG I + R P G+AFV + DAE A++A+
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPP-----GFAFVEYDDVRDAEDAVRAL 59
Query: 648 NG 653
+G
Sbjct: 60 DG 61
>Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical
protein ZK863.7 protein.
Length = 305
Score = 36.7 bits (81), Expect = 0.014
Identities = 20/62 (32%), Positives = 35/62 (56%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 647
+FVG+L +++N L++ F PF +++ C IV K YAFV +++ D + I +
Sbjct: 5 LFVGNLPDNVDSNKLKQVFQPFCKVTECDIV--------KNYAFV-HIEEDDVDPIITRL 55
Query: 648 NG 653
G
Sbjct: 56 TG 57
>U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein.
Length = 305
Score = 36.7 bits (81), Expect = 0.014
Identities = 20/62 (32%), Positives = 35/62 (56%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 647
+FVG+L +++N L++ F PF +++ C IV K YAFV +++ D + I +
Sbjct: 5 LFVGNLPDNVDSNKLKQVFQPFCKVTECDIV--------KNYAFV-HIEEDDVDPIITRL 55
Query: 648 NG 653
G
Sbjct: 56 TG 57
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 36.3 bits (80), Expect = 0.019
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 647
+FV ++ E + + + F+ +G+I N + D +T KGYA V + + +A AI
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQS 116
Query: 648 N 650
N
Sbjct: 117 N 117
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 35.9 bits (79), Expect = 0.025
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Frame = +3
Query: 393 DKEMKVNWATSPGNQPKTDTS--NHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRD 566
D E +P Q KTD S +F+ +LS + + +++E + FG+I I +
Sbjct: 238 DDEEPAKKPKNPKAQLKTDESITEGKVVFLRNLSYDTKEELIKEELSKFGKIDLAIICKY 297
Query: 567 PQTLKSKGYAFVSFVKKADAEAAIQAM 647
+ SKG AFV F +A I+ +
Sbjct: 298 KDSGHSKGTAFVHFSTPIEASNCIEGV 324
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 35.1 bits (77), Expect = 0.044
Identities = 39/158 (24%), Positives = 66/158 (41%), Gaps = 1/158 (0%)
Frame = +3
Query: 183 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGND-PYAFLEFTCHXXXXX 359
D+ +TL+VGN+ V E + +F + G V+ I D YAF+ F
Sbjct: 164 DDEATRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMF-----QTV 218
Query: 360 XXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGE 539
K D+ ++ + K+ S +FVG L + IL++AF FG
Sbjct: 219 DQAIQAKAEEQDRPIRAGGSRMKIGYGKSQVS--RRLFVGGLGSWCDKEILQKAFGEFGF 276
Query: 540 ISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNG 653
+ N I D + YA+V + ++ A +++ G
Sbjct: 277 VEN--IDYD----HGQPYAYVVYENTHTSQEACRSLRG 308
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 35.1 bits (77), Expect = 0.044
Identities = 39/158 (24%), Positives = 66/158 (41%), Gaps = 1/158 (0%)
Frame = +3
Query: 183 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGND-PYAFLEFTCHXXXXX 359
D+ +TL+VGN+ V E + +F + G V+ I D YAF+ F
Sbjct: 164 DDEATRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMF-----QTV 218
Query: 360 XXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGE 539
K D+ ++ + K+ S +FVG L + IL++AF FG
Sbjct: 219 DQAIQAKAEEQDRPIRAGGSRMKIGYGKSQVS--RRLFVGGLGSWCDKEILQKAFGEFGF 276
Query: 540 ISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNG 653
+ N I D + YA+V + ++ A +++ G
Sbjct: 277 VEN--IDYD----HGQPYAYVVYENTHTSQEACRSLRG 308
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 35.1 bits (77), Expect = 0.044
Identities = 39/158 (24%), Positives = 66/158 (41%), Gaps = 1/158 (0%)
Frame = +3
Query: 183 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGND-PYAFLEFTCHXXXXX 359
D+ +TL+VGN+ V E + +F + G V+ I D YAF+ F
Sbjct: 141 DDEATRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMF-----QTV 195
Query: 360 XXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGE 539
K D+ ++ + K+ S +FVG L + IL++AF FG
Sbjct: 196 DQAIQAKAEEQDRPIRAGGSRMKIGYGKSQVS--RRLFVGGLGSWCDKEILQKAFGEFGF 253
Query: 540 ISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNG 653
+ N I D + YA+V + ++ A +++ G
Sbjct: 254 VEN--IDYD----HGQPYAYVVYENTHTSQEACRSLRG 285
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 33.9 bits (74), Expect = 0.10
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 647
IF+G L + + ++E FG + + D Q SKGYAF ++ + AI +
Sbjct: 293 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQG-NSKGYAFAEYLDPTLTDQAIAGL 351
Query: 648 NG 653
NG
Sbjct: 352 NG 353
>U55857-6|AAA98032.2| 206|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 2 protein.
Length = 206
Score = 33.9 bits (74), Expect = 0.10
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREA----FAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAA 635
+++ +L+ +I+ + LR++ F FGEI + R TLK +G A V F + A AA
Sbjct: 10 LYINNLNEKIKIDELRKSLVAVFKQFGEIVSVMCFR---TLKMRGQAHVIFKELPAASAA 66
Query: 636 IQAMNG 653
+A+NG
Sbjct: 67 REALNG 72
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 33.9 bits (74), Expect = 0.10
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 647
IF+G L + + ++E FG + + D Q SKGYAF ++ + AI +
Sbjct: 293 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQG-NSKGYAFAEYLDPTLTDQAIAGL 351
Query: 648 NG 653
NG
Sbjct: 352 NG 353
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 33.9 bits (74), Expect = 0.10
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 647
IF+G L + + ++E FG + + D Q SKGYAF ++ + AI +
Sbjct: 268 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQG-NSKGYAFAEYLDPTLTDQAIAGL 326
Query: 648 NG 653
NG
Sbjct: 327 NG 328
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 33.9 bits (74), Expect = 0.10
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 647
IF+G L + + ++E FG + + D Q SKGYAF ++ + AI +
Sbjct: 271 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQG-NSKGYAFAEYLDPTLTDQAIAGL 329
Query: 648 NG 653
NG
Sbjct: 330 NG 331
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 33.1 bits (72), Expect = 0.18
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 647
I++G L+ + + F +G+I RD L G+ FV F K DAE A+ +
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQI------RD--VLLKNGFGFVEFDDKRDAEDAVHDL 56
Query: 648 NGQ 656
NG+
Sbjct: 57 NGK 59
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 33.1 bits (72), Expect = 0.18
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 647
I++G L+ + + F +G+I RD L G+ FV F K DAE A+ +
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQI------RD--VLLKNGFGFVEFDDKRDAEDAVHDL 56
Query: 648 NGQ 656
NG+
Sbjct: 57 NGK 59
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 33.1 bits (72), Expect = 0.18
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 647
I++G L+ + + F +G+I RD L G+ FV F K DAE A+ +
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQI------RD--VLLKNGFGFVEFDDKRDAEDAVHDL 56
Query: 648 NGQ 656
NG+
Sbjct: 57 NGK 59
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 33.1 bits (72), Expect = 0.18
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 647
+F+G++ + E F G+I I +D T K K +A++ F + E A+ M
Sbjct: 57 VFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENAL-VM 115
Query: 648 NG 653
NG
Sbjct: 116 NG 117
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 32.7 bits (71), Expect = 0.24
Identities = 20/78 (25%), Positives = 35/78 (44%)
Frame = +3
Query: 420 TSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAF 599
T P + + V ++ L+ F FG +S+ I+ + + SKG+ F
Sbjct: 139 TQPDPSTSSGPDGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERG--SKGFGF 196
Query: 600 VSFVKKADAEAAIQAMNG 653
V+ + DAE A Q ++G
Sbjct: 197 VTMERPQDAERARQELHG 214
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 32.7 bits (71), Expect = 0.24
Identities = 20/78 (25%), Positives = 35/78 (44%)
Frame = +3
Query: 420 TSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAF 599
T P + + V ++ L+ F FG +S+ I+ + + SKG+ F
Sbjct: 139 TQPDPSTSSGPDGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERG--SKGFGF 196
Query: 600 VSFVKKADAEAAIQAMNG 653
V+ + DAE A Q ++G
Sbjct: 197 VTMERPQDAERARQELHG 214
>Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical
protein C25A1.4 protein.
Length = 454
Score = 32.3 bits (70), Expect = 0.31
Identities = 19/63 (30%), Positives = 32/63 (50%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 647
IF+ +L+ + T+ L E F G+I+ D + KSKG + + +A A+ +
Sbjct: 190 IFIANLAFNVGTDKLYEVFGMAGKITWMDFRIDKEG-KSKGVCVIQYTHPIEAVQAVSML 248
Query: 648 NGQ 656
NGQ
Sbjct: 249 NGQ 251
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 32.3 bits (70), Expect = 0.31
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +3
Query: 462 HHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAE 629
+ IFVG LRE F F + + ++V+ +SKGY F++F + AE
Sbjct: 66 NRIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDG-QSKGYGFITFETEDQAE 120
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 32.3 bits (70), Expect = 0.31
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Frame = +3
Query: 423 SPGNQPKT-DTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDP-QTLKSKGYA 596
SP P S + + +LS + L E F+ +G I N + D +GY
Sbjct: 119 SPRRSPAARSASPAKRVVIKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVHRGYG 178
Query: 597 FVSFVKKADAEAAIQAMNG 653
+V + DAE +I+ M+G
Sbjct: 179 YVEYDNLEDAEKSIKHMDG 197
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 32.3 bits (70), Expect = 0.31
Identities = 18/67 (26%), Positives = 33/67 (49%)
Frame = +3
Query: 453 SNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEA 632
S ++VG+L ++ + + F +G I D ++ + +AFV F DAE
Sbjct: 6 SEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYV----DIKSGRGPAFAFVEFEDHRDAED 61
Query: 633 AIQAMNG 653
A++A +G
Sbjct: 62 AVRARDG 68
Score = 28.7 bits (61), Expect = 3.8
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 189 SHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP-YAFLEFTCH 344
S + +YVGNL V E + +F + G +K I + G P +AF+EF H
Sbjct: 6 SEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDI--KSGRGPAFAFVEFEDH 56
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 32.3 bits (70), Expect = 0.31
Identities = 18/67 (26%), Positives = 33/67 (49%)
Frame = +3
Query: 453 SNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEA 632
S ++VG+L ++ + + F +G I D ++ + +AFV F DAE
Sbjct: 6 SEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYV----DIKSGRGPAFAFVEFEDHRDAED 61
Query: 633 AIQAMNG 653
A++A +G
Sbjct: 62 AVRARDG 68
Score = 28.7 bits (61), Expect = 3.8
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 189 SHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP-YAFLEFTCH 344
S + +YVGNL V E + +F + G +K I + G P +AF+EF H
Sbjct: 6 SEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDI--KSGRGPAFAFVEFEDH 56
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 32.3 bits (70), Expect = 0.31
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +3
Query: 462 HHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAE 629
+ IFVG LRE F F + + ++V+ +SKGY F++F + AE
Sbjct: 67 NRIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDG-QSKGYGFITFETEDQAE 121
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 31.5 bits (68), Expect = 0.54
Identities = 18/62 (29%), Positives = 34/62 (54%)
Frame = +3
Query: 468 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 647
+++ +L +I T + E F FG + R +R T +++G AFV + DA+ A + +
Sbjct: 21 LYIKNLPYKITTEEMYEIFGKFGAV---RQIRVGNTAETRGTAFVVYEDIFDAKTACEHL 77
Query: 648 NG 653
+G
Sbjct: 78 SG 79
>AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical
protein K07H8.10 protein.
Length = 798
Score = 31.1 bits (67), Expect = 0.72
Identities = 31/131 (23%), Positives = 46/131 (35%), Gaps = 3/131 (2%)
Frame = +3
Query: 270 GDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTD 449
G V G R N + +L F ++K + K + V++ S PK
Sbjct: 571 GLVTGLDSFRRKKNSNFGWLVFNTVADCKKAHDVLSKSKIQGKALYVDFCLSESKAPKEH 630
Query: 450 ---TSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKA 620
N +F+ L L+ F +I P SK AF++F
Sbjct: 631 GVRPINPLQLFINALPGTCNNTDLKNIFRSSTDIKILHASGQPN---SKKRAFITFGTVE 687
Query: 621 DAEAAIQAMNG 653
DA+AA NG
Sbjct: 688 DAQAAFAKSNG 698
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 31.1 bits (67), Expect = 0.72
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = +3
Query: 405 KVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGE-ISNCRIVRDPQTLK 581
KVN+A + SN ++FV +S ++ L +AF + + C +
Sbjct: 77 KVNFAKKEPKPAENVMSNISNVFVRGISRDMPDTELYQAFGGITDGVVQCHV-------- 128
Query: 582 SKGYAFVSFVKKADAEAAIQAMNGQ 656
+ GY FV F +A+A+ I M+G+
Sbjct: 129 ADGYGFVLFDTRANAQKKIVEMDGK 153
>U55370-7|AAA97998.2| 388|Caenorhabditis elegans Hypothetical
protein K03B4.1 protein.
Length = 388
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +3
Query: 183 DESH-PKTLYVGNLDPSVTEVFLCTLFGQ 266
D SH P T VGN P++T FL T FG+
Sbjct: 193 DSSHFPLTYLVGNSLPAITSPFLKTSFGE 221
>AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical
protein C07H6.4 protein.
Length = 933
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 183 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKII 296
D+ + +YV N+ SVTE L FG G + KI+
Sbjct: 195 DDPYTTNVYVSNIPHSVTEDDLLFTFGSFGPLAALKIL 232
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 510 LREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQ 641
L F +G I + + DP T +G+A ++F K A AI+
Sbjct: 41 LEHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSKDGANKAIE 84
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +3
Query: 201 TLYVGNLDPSVTEVFLCTLFGQIGDVK 281
TLYVGNL E + LFG+ GDV+
Sbjct: 38 TLYVGNLSYYTKEDQVYELFGRAGDVR 64
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 28.3 bits (60), Expect = 5.1
Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = -1
Query: 471 ICDD---DY*CPSSAGYQDSSPN*PSFPCRGPLACSWRPALWPPPC 343
IC D Y C SA + D SP+ S P R C RP PP C
Sbjct: 1446 ICQDLPQGYTCQCSADFVDVSPHRASHPGR---LCQPRPTPPPPEC 1488
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 28.3 bits (60), Expect = 5.1
Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = -1
Query: 471 ICDD---DY*CPSSAGYQDSSPN*PSFPCRGPLACSWRPALWPPPC 343
IC D Y C SA + D SP+ S P R C RP PP C
Sbjct: 2030 ICQDLPQGYTCQCSADFVDVSPHRASHPGR---LCQPRPTPPPPEC 2072
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 28.3 bits (60), Expect = 5.1
Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = -1
Query: 471 ICDD---DY*CPSSAGYQDSSPN*PSFPCRGPLACSWRPALWPPPC 343
IC D Y C SA + D SP+ S P R C RP PP C
Sbjct: 1446 ICQDLPQGYTCQCSADFVDVSPHRASHPGR---LCQPRPTPPPPEC 1488
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 28.3 bits (60), Expect = 5.1
Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = -1
Query: 471 ICDD---DY*CPSSAGYQDSSPN*PSFPCRGPLACSWRPALWPPPC 343
IC D Y C SA + D SP+ S P R C RP PP C
Sbjct: 2030 ICQDLPQGYTCQCSADFVDVSPHRASHPGR---LCQPRPTPPPPEC 2072
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 28.3 bits (60), Expect = 5.1
Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = -1
Query: 471 ICDD---DY*CPSSAGYQDSSPN*PSFPCRGPLACSWRPALWPPPC 343
IC D Y C SA + D SP+ S P R C RP PP C
Sbjct: 2030 ICQDLPQGYTCQCSADFVDVSPHRASHPGR---LCQPRPTPPPPEC 2072
>AF099919-4|AAC68791.1| 230|Caenorhabditis elegans Hypothetical
protein F40G9.12 protein.
Length = 230
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 587 GLCFCIICKESRCRSCHPGNE 649
G C CKE C++C P NE
Sbjct: 111 GKSVCEDCKEHECKACEPPNE 131
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 27.9 bits (59), Expect = 6.7
Identities = 20/78 (25%), Positives = 32/78 (41%)
Frame = +3
Query: 198 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMN 377
+TL++ + ++ E L G+ K+I GN A++ M
Sbjct: 525 RTLWLKKIPTNIVENDLKQAVESCGEASRVKVI---GNRACAYITMENRRSANDVVSKMR 581
Query: 378 KRVVLDKEMKVNWATSPG 431
+ V K +KV WA SPG
Sbjct: 582 EVSVAKKMVKVYWARSPG 599
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,858,215
Number of Sequences: 27780
Number of extensions: 317089
Number of successful extensions: 1064
Number of sequences better than 10.0: 110
Number of HSP's better than 10.0 without gapping: 816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 989
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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