Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte21i24
(319 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF047659-14|AAV34788.1| 429|Caenorhabditis elegans Hypothetical... 28 1.7
AF047659-13|AAK82908.1| 503|Caenorhabditis elegans Hypothetical... 28 1.7
AF047659-12|AAC04427.1| 507|Caenorhabditis elegans Hypothetical... 28 1.7
Z49968-12|CAA90264.1| 880|Caenorhabditis elegans Hypothetical p... 27 3.9
Z49966-8|CAA90246.1| 880|Caenorhabditis elegans Hypothetical pr... 27 3.9
U49829-5|AAK68351.1| 564|Caenorhabditis elegans Hypothetical pr... 27 3.9
AL031627-13|CAA20964.1| 304|Caenorhabditis elegans Hypothetical... 26 5.1
U41533-11|AAO38614.1| 387|Caenorhabditis elegans Hypothetical p... 26 6.8
U41533-10|AAA83172.1| 491|Caenorhabditis elegans Hypothetical p... 26 6.8
U41533-8|AAA83171.2| 588|Caenorhabditis elegans Hypothetical pr... 26 6.8
>AF047659-14|AAV34788.1| 429|Caenorhabditis elegans Hypothetical
protein K07H8.2c protein.
Length = 429
Score = 27.9 bits (59), Expect = 1.7
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = -3
Query: 170 WTYYSFTGSSKRFIKKNSANSHHFLLRQYFVPSHLV*FNVLLMSITLMTRKRI 12
WT FT + F K + +L VP H+ FN L+ TL ++ +
Sbjct: 300 WTVSRFTSVQRAFFSKEWDSRSARVLLLLVVPGHIC-FNFLIQLFTLTSKNNV 351
>AF047659-13|AAK82908.1| 503|Caenorhabditis elegans Hypothetical
protein K07H8.2b protein.
Length = 503
Score = 27.9 bits (59), Expect = 1.7
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = -3
Query: 170 WTYYSFTGSSKRFIKKNSANSHHFLLRQYFVPSHLV*FNVLLMSITLMTRKRI 12
WT FT + F K + +L VP H+ FN L+ TL ++ +
Sbjct: 374 WTVSRFTSVQRAFFSKEWDSRSARVLLLLVVPGHIC-FNFLIQLFTLTSKNNV 425
>AF047659-12|AAC04427.1| 507|Caenorhabditis elegans Hypothetical
protein K07H8.2a protein.
Length = 507
Score = 27.9 bits (59), Expect = 1.7
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = -3
Query: 170 WTYYSFTGSSKRFIKKNSANSHHFLLRQYFVPSHLV*FNVLLMSITLMTRKRI 12
WT FT + F K + +L VP H+ FN L+ TL ++ +
Sbjct: 378 WTVSRFTSVQRAFFSKEWDSRSARVLLLLVVPGHIC-FNFLIQLFTLTSKNNV 429
>Z49968-12|CAA90264.1| 880|Caenorhabditis elegans Hypothetical
protein M110.7 protein.
Length = 880
Score = 26.6 bits (56), Expect = 3.9
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +1
Query: 85 YCLSKKWWLFA-EFFLMNLLEEPVKL*YV 168
+CL K+WW F E ++N+ E +L YV
Sbjct: 752 WCLFKRWWPFGEELRVLNMNEVQNRLAYV 780
>Z49966-8|CAA90246.1| 880|Caenorhabditis elegans Hypothetical
protein M110.7 protein.
Length = 880
Score = 26.6 bits (56), Expect = 3.9
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +1
Query: 85 YCLSKKWWLFA-EFFLMNLLEEPVKL*YV 168
+CL K+WW F E ++N+ E +L YV
Sbjct: 752 WCLFKRWWPFGEELRVLNMNEVQNRLAYV 780
>U49829-5|AAK68351.1| 564|Caenorhabditis elegans Hypothetical
protein F27D9.7 protein.
Length = 564
Score = 26.6 bits (56), Expect = 3.9
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = -1
Query: 295 VSIYFFVLFI*CSCLNV**QWLVIIYYYYYV-QHLWKGTKKAAGRIIASRVLPKGSLKKI 119
+SI F+ I C C N + L II YY+ ++ W+ K G++ S L + S +
Sbjct: 238 ISISLFICTIYC-CPNEPTEILFIIKASYYLSEYQWESVKALLGKVSGSVNLGRSS--EA 294
Query: 118 LQIATIFY*DNISSHLILFNLMFY 47
QI + DN++ + + L Y
Sbjct: 295 SQIGVYLF-DNLNMPVPVIGLGTY 317
>AL031627-13|CAA20964.1| 304|Caenorhabditis elegans Hypothetical
protein Y102A5C.23 protein.
Length = 304
Score = 26.2 bits (55), Expect = 5.1
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -3
Query: 299 SCINLFFCFIHLVFMFKCLIT 237
+CI++FFCF L F C+IT
Sbjct: 81 TCISVFFCFYSL-FSSLCIIT 100
>U41533-11|AAO38614.1| 387|Caenorhabditis elegans Hypothetical
protein R05F9.1c protein.
Length = 387
Score = 25.8 bits (54), Expect = 6.8
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -1
Query: 208 YVQHLWKGTKKAAGRIIASRVLPKGSLKKI 119
Y HL+K K A R A +VL + LKKI
Sbjct: 207 YSTHLYKFFKYAENRDCAKQVLKERGLKKI 236
>U41533-10|AAA83172.1| 491|Caenorhabditis elegans Hypothetical
protein R05F9.1a protein.
Length = 491
Score = 25.8 bits (54), Expect = 6.8
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -1
Query: 208 YVQHLWKGTKKAAGRIIASRVLPKGSLKKI 119
Y HL+K K A R A +VL + LKKI
Sbjct: 311 YSTHLYKFFKYAENRDCAKQVLKERGLKKI 340
>U41533-8|AAA83171.2| 588|Caenorhabditis elegans Hypothetical
protein R05F9.1b protein.
Length = 588
Score = 25.8 bits (54), Expect = 6.8
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -1
Query: 208 YVQHLWKGTKKAAGRIIASRVLPKGSLKKI 119
Y HL+K K A R A +VL + LKKI
Sbjct: 408 YSTHLYKFFKYAENRDCAKQVLKERGLKKI 437
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,531,599
Number of Sequences: 27780
Number of extensions: 112734
Number of successful extensions: 189
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 189
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 366105812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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