Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte21i22
(623 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99277-2|CAB16487.1| 557|Caenorhabditis elegans Hypothetical pr... 29 2.7
AL031627-10|CAA20949.1| 301|Caenorhabditis elegans Hypothetical... 28 4.7
Z81102-1|CAB03202.1| 320|Caenorhabditis elegans Hypothetical pr... 28 6.2
U29537-6|AAO38648.1| 340|Caenorhabditis elegans Egg laying defe... 28 6.2
U29537-5|AAO38650.1| 414|Caenorhabditis elegans Egg laying defe... 28 6.2
U29537-4|AAO38647.1| 450|Caenorhabditis elegans Egg laying defe... 28 6.2
U29537-3|AAO38646.1| 457|Caenorhabditis elegans Egg laying defe... 28 6.2
U29537-2|AAK31508.1| 465|Caenorhabditis elegans Egg laying defe... 28 6.2
Z83216-4|CAB62781.1| 314|Caenorhabditis elegans Hypothetical pr... 27 8.2
U23515-15|AAK21452.1| 928|Caenorhabditis elegans Kinesin-like p... 27 8.2
AB023497-1|BAA88682.1| 928|Caenorhabditis elegans kinesin like ... 27 8.2
>Z99277-2|CAB16487.1| 557|Caenorhabditis elegans Hypothetical
protein Y53C12A.3 protein.
Length = 557
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +1
Query: 469 PNVNVPEKIIVCLDVCYDNPNSLYRFGDGTTFSPINMLKRILDFFFHTKH 618
P NVPE + ++ Y + G G +S +L +FFHTKH
Sbjct: 489 PQHNVPETGLATIEAIYYSLREYQELGLGRKYS--GEFDDLLYWFFHTKH 536
>AL031627-10|CAA20949.1| 301|Caenorhabditis elegans Hypothetical
protein Y102A5C.19 protein.
Length = 301
Score = 28.3 bits (60), Expect = 4.7
Identities = 17/64 (26%), Positives = 31/64 (48%)
Frame = -1
Query: 380 LESLSDAPCELLEDTVSGLSII*NVCIIRFIGVTTQSCSSGLNPIGTKFYVRIIEKFYTY 201
+ SLSD P EL+E ++ L + + I R + + ++ L P +V EKF
Sbjct: 1 MSSLSDLPIELIEQILNNLEALERL-IARKVSYSFRAIIDNLGPNLKTVHVNFHEKFSRL 59
Query: 200 LFED 189
+ ++
Sbjct: 60 ILDE 63
>Z81102-1|CAB03202.1| 320|Caenorhabditis elegans Hypothetical
protein M02B1.3 protein.
Length = 320
Score = 27.9 bits (59), Expect = 6.2
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +3
Query: 45 YFIFNWILFNVYVCTFVFKCILYRG 119
+F+F W N F+FKCI + G
Sbjct: 237 FFLFGWAWVNYDHIHFIFKCIAFGG 261
>U29537-6|AAO38648.1| 340|Caenorhabditis elegans Egg laying
defective protein 44,isoform d protein.
Length = 340
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +3
Query: 546 W*WHNIFSNQYVETNT*FLFS-YKTCN 623
W +HN+FSN + T LFS Y CN
Sbjct: 123 WIYHNLFSNNPLPTKQFHLFSAYVKCN 149
>U29537-5|AAO38650.1| 414|Caenorhabditis elegans Egg laying
defective protein 44,isoform f protein.
Length = 414
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +3
Query: 546 W*WHNIFSNQYVETNT*FLFS-YKTCN 623
W +HN+FSN + T LFS Y CN
Sbjct: 197 WIYHNLFSNNPLPTKQFHLFSAYVKCN 223
>U29537-4|AAO38647.1| 450|Caenorhabditis elegans Egg laying
defective protein 44,isoform c protein.
Length = 450
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +3
Query: 546 W*WHNIFSNQYVETNT*FLFS-YKTCN 623
W +HN+FSN + T LFS Y CN
Sbjct: 233 WIYHNLFSNNPLPTKQFHLFSAYVKCN 259
>U29537-3|AAO38646.1| 457|Caenorhabditis elegans Egg laying
defective protein 44,isoform b protein.
Length = 457
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +3
Query: 546 W*WHNIFSNQYVETNT*FLFS-YKTCN 623
W +HN+FSN + T LFS Y CN
Sbjct: 240 WIYHNLFSNNPLPTKQFHLFSAYVKCN 266
>U29537-2|AAK31508.1| 465|Caenorhabditis elegans Egg laying
defective protein 44,isoform a protein.
Length = 465
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +3
Query: 546 W*WHNIFSNQYVETNT*FLFS-YKTCN 623
W +HN+FSN + T LFS Y CN
Sbjct: 248 WIYHNLFSNNPLPTKQFHLFSAYVKCN 274
>Z83216-4|CAB62781.1| 314|Caenorhabditis elegans Hypothetical
protein C08F11.5 protein.
Length = 314
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -1
Query: 374 SLSDAPCELLEDTVSGLSII*NVCI 300
SLSD P E++ED +S L+ I + +
Sbjct: 17 SLSDMPIEIIEDIISDLAAIDRIAV 41
>U23515-15|AAK21452.1| 928|Caenorhabditis elegans Kinesin-like
protein protein 6 protein.
Length = 928
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -3
Query: 552 ITKTV*RIWIVIANI*ADNYFLW 484
+T + IW+ + NI D YFLW
Sbjct: 632 LTSGLTEIWVKVHNISEDTYFLW 654
>AB023497-1|BAA88682.1| 928|Caenorhabditis elegans kinesin like
protein KLP-6 protein.
Length = 928
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -3
Query: 552 ITKTV*RIWIVIANI*ADNYFLW 484
+T + IW+ + NI D YFLW
Sbjct: 632 LTSGLTEIWVKVHNISEDTYFLW 654
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,355,051
Number of Sequences: 27780
Number of extensions: 302415
Number of successful extensions: 827
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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