Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21i21
         (487 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC009908-1|AAH09908.2|   61|Homo sapiens EXOSC10 protein protein.      31   1.6  
BC128392-1|AAI28393.1|  782|Homo sapiens zinc finger protein 786...    31   2.8  
BC109245-1|AAI09246.1|  753|Homo sapiens ZNF786 protein protein.       31   2.8  

>BC009908-1|AAH09908.2|   61|Homo sapiens EXOSC10 protein protein.
          Length = 61

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = -2

Query: 285 WTTPLHFLY-SIHHTPSSLSHTNRHTLFTYN 196
           WT+PLH+L  SI   PS LS T  H L   N
Sbjct: 31  WTSPLHWLISSISREPSRLSKTCLHILINMN 61


>BC128392-1|AAI28393.1|  782|Homo sapiens zinc finger protein 786
           protein.
          Length = 782

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +2

Query: 365 PTQAVACVLXRRLWPSNTSHRRRTLHSREXPAGW 466
           P Q   C   +R  P +++  RR  HSRE PA W
Sbjct: 295 PAQCTPC--GKRSLPVDSTQARRCQHSREGPASW 326


>BC109245-1|AAI09246.1|  753|Homo sapiens ZNF786 protein protein.
          Length = 753

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +2

Query: 365 PTQAVACVLXRRLWPSNTSHRRRTLHSREXPAGW 466
           P Q   C   +R  P +++  RR  HSRE PA W
Sbjct: 266 PAQCTPC--GKRSLPVDSTQARRCQHSREGPASW 297


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,625,869
Number of Sequences: 237096
Number of extensions: 1507568
Number of successful extensions: 3000
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3000
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4384610846
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)