Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21i21
         (487 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   2.3  
AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.        22   3.0  
DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated...    22   4.0  
AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc fi...    21   5.3  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   7.0  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   9.2  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   9.2  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 8/35 (22%), Positives = 16/35 (45%)
 Frame = -3

Query: 470  PTTPLXSLVSAECDDGVMCCSAIDDXEEHTRLLVW 366
            P+  +  + + E   G      +DD ++HT  + W
Sbjct: 963  PSDTVTIITAEEAPSGPPTSIRVDDLDQHTLKVTW 997


>AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.
          Length = 62

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 146 DCLFLD*FLNSLHFKSSSLF 87
           DCL+LD + NSL      +F
Sbjct: 3   DCLYLDVYTNSLDQSKPVMF 22


>DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 391

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +3

Query: 228 GTKS*VCDVYYIKSVVVLSSGCRASVAA 311
           G KS +  V Y+K++ V  +GC   V A
Sbjct: 248 GLKSDIPPVAYVKALDVWMAGCMMFVFA 275


>AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc
           finger domain-Z3 isoform protein.
          Length = 92

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 11/39 (28%), Positives = 17/39 (43%)
 Frame = +3

Query: 351 RPAQAPHKQSRVFFXVVYGRATHHTVVALCTHERXQRGG 467
           R  Q  H+QS   +   +    + T  +L TH+  Q  G
Sbjct: 23  RHFQDKHEQSDTLYVCEFCNRRYRTKNSLTTHKSLQHRG 61


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -3

Query: 248 THLALCPTP 222
           TH  LCPTP
Sbjct: 377 THSQLCPTP 385


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 7/24 (29%), Positives = 16/24 (66%)
 Frame = +2

Query: 119 LKINPGINNLQQNSITRHSTVHNI 190
           L +N G+N + +NS+    T++++
Sbjct: 548 LDLNSGLNKITRNSLDCFFTMNDL 571


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 7/24 (29%), Positives = 16/24 (66%)
 Frame = +2

Query: 119 LKINPGINNLQQNSITRHSTVHNI 190
           L +N G+N + +NS+    T++++
Sbjct: 548 LDLNSGLNKITRNSLDCFFTMNDL 571


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,925
Number of Sequences: 438
Number of extensions: 2843
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13297932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)