Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21i20
         (273 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   1.6  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   1.6  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          22   1.6  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    21   3.7  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    20   4.8  
DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex det...    20   6.4  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    20   6.4  
DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex det...    19   8.4  
DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex det...    19   8.4  
DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex det...    19   8.4  
DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex det...    19   8.4  
DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex det...    19   8.4  
DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex det...    19   8.4  
DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex det...    19   8.4  
DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex det...    19   8.4  
AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.           19   8.4  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 1.6
 Identities = 10/43 (23%), Positives = 21/43 (48%)
 Frame = +1

Query: 46  INFKCFKSVMETLDRITTTFENVRNVIKNKSSMERLQSLKKDM 174
           +NF        T+D++ T F++  +++ N  S++     K  M
Sbjct: 443 LNFPGVSIESVTVDKLITYFDHFESMLNNGVSIQSHAKAKNTM 485


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 1.6
 Identities = 10/43 (23%), Positives = 21/43 (48%)
 Frame = +1

Query: 46  INFKCFKSVMETLDRITTTFENVRNVIKNKSSMERLQSLKKDM 174
           +NF        T+D++ T F++  +++ N  S++     K  M
Sbjct: 443 LNFPGVSIESVTVDKLITYFDHFESMLNNGVSIQSHAKAKNTM 485


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 21.8 bits (44), Expect = 1.6
 Identities = 10/43 (23%), Positives = 21/43 (48%)
 Frame = +1

Query: 46  INFKCFKSVMETLDRITTTFENVRNVIKNKSSMERLQSLKKDM 174
           +NF        T+D++ T F++  +++ N  S++     K  M
Sbjct: 69  LNFPGVSIESVTVDKLITYFDHFESMLNNGVSIQSHAKAKNTM 111


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 20.6 bits (41), Expect = 3.7
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +3

Query: 72  YGNIRSNNNYVRKCEE 119
           Y N   NNNY   C++
Sbjct: 338 YNNNNYNNNYNNNCKK 353


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 20.2 bits (40), Expect = 4.8
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 129 LDYVPHIFERSCYSI 85
           +D VPH+FE +  S+
Sbjct: 229 IDAVPHLFESANISL 243


>DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex
           determiner protein.
          Length = 178

 Score = 19.8 bits (39), Expect = 6.4
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 69  RYGNIRSNNNYVRKCEERN 125
           +Y N  + NNY +K   +N
Sbjct: 90  KYSNYNNYNNYNKKLYYKN 108


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 19.8 bits (39), Expect = 6.4
 Identities = 5/26 (19%), Positives = 17/26 (65%)
 Frame = +1

Query: 184 GMELVALGKENHDQYVRSLAMDAYLS 261
           GM++++  K+  + ++ +++   Y+S
Sbjct: 361 GMKIISSKKDRQELWIFTISFQKYMS 386


>DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 19.4 bits (38), Expect = 8.4
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +3

Query: 72  YGNIRSNNNY 101
           Y N  +NNNY
Sbjct: 94  YNNYNNNNNY 103


>DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 19.4 bits (38), Expect = 8.4
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +3

Query: 72  YGNIRSNNNY 101
           Y N  +NNNY
Sbjct: 94  YNNYNNNNNY 103


>DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 19.4 bits (38), Expect = 8.4
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +3

Query: 72  YGNIRSNNNY 101
           Y N  +NNNY
Sbjct: 94  YNNYNNNNNY 103


>DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 19.4 bits (38), Expect = 8.4
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +3

Query: 72  YGNIRSNNNY 101
           Y N  +NNNY
Sbjct: 94  YNNYNNNNNY 103


>DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 19.4 bits (38), Expect = 8.4
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +3

Query: 72  YGNIRSNNNY 101
           Y N  +NNNY
Sbjct: 94  YNNYNNNNNY 103


>DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 19.4 bits (38), Expect = 8.4
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +3

Query: 72  YGNIRSNNNY 101
           Y N  +NNNY
Sbjct: 94  YNNYNNNNNY 103


>DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 19.4 bits (38), Expect = 8.4
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +3

Query: 72  YGNIRSNNNY 101
           Y N  +NNNY
Sbjct: 94  YNNYNNNNNY 103


>DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 19.4 bits (38), Expect = 8.4
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +3

Query: 72  YGNIRSNNNY 101
           Y N  +NNNY
Sbjct: 94  YNNYNNNNNY 103


>AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.
          Length = 126

 Score = 19.4 bits (38), Expect = 8.4
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 255 IGVHCKRPHVLVVILL 208
           +GVHC +    VV+ L
Sbjct: 85  VGVHCMKTTQAVVVSL 100


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,586
Number of Sequences: 438
Number of extensions: 1509
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  5263398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)