Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte21i19
(476 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z98261-1|CAB10931.1| 920|Caenorhabditis elegans Hypothetical pr... 33 0.11
Z71266-11|CAA95847.1| 920|Caenorhabditis elegans Hypothetical p... 33 0.11
Z71258-16|CAA95786.1| 920|Caenorhabditis elegans Hypothetical p... 33 0.11
AF408763-1|AAO27842.1| 459|Caenorhabditis elegans unknown prote... 33 0.11
L14745-8|AAA27923.1| 244|Caenorhabditis elegans Tetraspanin fam... 29 1.7
AC024751-3|AAK21513.2| 440|Caenorhabditis elegans Hypothetical ... 29 1.7
U41549-1|AAA83281.1| 299|Caenorhabditis elegans Hypothetical pr... 28 3.0
Z49131-2|CAA88975.1| 321|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z48583-1|CAA88470.1| 389|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z66521-10|CAH10788.1| 359|Caenorhabditis elegans Hypothetical p... 27 5.3
Z66521-9|CAA91402.1| 367|Caenorhabditis elegans Hypothetical pr... 27 5.3
U70845-4|AAB09102.1| 340|Caenorhabditis elegans Hypothetical pr... 27 5.3
U39854-2|AAA81077.2| 703|Caenorhabditis elegans Puf (pumilio/fb... 27 7.0
U58743-1|AAB00613.1| 298|Caenorhabditis elegans Hypothetical pr... 27 9.2
U56961-1|AAK39295.1| 118|Caenorhabditis elegans Hypothetical pr... 27 9.2
U53153-3|AAC69038.1| 653|Caenorhabditis elegans Germinal center... 27 9.2
U00045-2|AAL02501.1| 1004|Caenorhabditis elegans Temporarily ass... 27 9.2
U00045-1|AAM29684.1| 1099|Caenorhabditis elegans Temporarily ass... 27 9.2
>Z98261-1|CAB10931.1| 920|Caenorhabditis elegans Hypothetical
protein C01H6.9 protein.
Length = 920
Score = 33.1 bits (72), Expect = 0.11
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Frame = +2
Query: 203 LSLDDVEPEITVLGIHDTSNRV-ATARDYVLRRCNQTDAILFDECYPDALL-KNCHKIGE 376
+++ + +P I + D ++ + + +L Q ++ +D AL + K+GE
Sbjct: 537 MTIHNEDPSILPFYLEDLTSEIDPSPMMQLLHVVGQKESKTWDSLPKSALDGRRVKKLGE 596
Query: 377 GVYGEVF--LWRARDGRARVMKIVP 445
G YGEVF +W DG+ +KIVP
Sbjct: 597 GAYGEVFSTIW---DGKPVAIKIVP 618
>Z71266-11|CAA95847.1| 920|Caenorhabditis elegans Hypothetical
protein C01H6.9 protein.
Length = 920
Score = 33.1 bits (72), Expect = 0.11
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Frame = +2
Query: 203 LSLDDVEPEITVLGIHDTSNRV-ATARDYVLRRCNQTDAILFDECYPDALL-KNCHKIGE 376
+++ + +P I + D ++ + + +L Q ++ +D AL + K+GE
Sbjct: 537 MTIHNEDPSILPFYLEDLTSEIDPSPMMQLLHVVGQKESKTWDSLPKSALDGRRVKKLGE 596
Query: 377 GVYGEVF--LWRARDGRARVMKIVP 445
G YGEVF +W DG+ +KIVP
Sbjct: 597 GAYGEVFSTIW---DGKPVAIKIVP 618
>Z71258-16|CAA95786.1| 920|Caenorhabditis elegans Hypothetical
protein C01H6.9 protein.
Length = 920
Score = 33.1 bits (72), Expect = 0.11
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Frame = +2
Query: 203 LSLDDVEPEITVLGIHDTSNRV-ATARDYVLRRCNQTDAILFDECYPDALL-KNCHKIGE 376
+++ + +P I + D ++ + + +L Q ++ +D AL + K+GE
Sbjct: 537 MTIHNEDPSILPFYLEDLTSEIDPSPMMQLLHVVGQKESKTWDSLPKSALDGRRVKKLGE 596
Query: 377 GVYGEVF--LWRARDGRARVMKIVP 445
G YGEVF +W DG+ +KIVP
Sbjct: 597 GAYGEVFSTIW---DGKPVAIKIVP 618
>AF408763-1|AAO27842.1| 459|Caenorhabditis elegans unknown protein
protein.
Length = 459
Score = 33.1 bits (72), Expect = 0.11
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Frame = +2
Query: 203 LSLDDVEPEITVLGIHDTSNRV-ATARDYVLRRCNQTDAILFDECYPDALL-KNCHKIGE 376
+++ + +P I + D ++ + + +L Q ++ +D AL + K+GE
Sbjct: 245 MTIHNEDPSILPFYLEDLTSEIDPSPMMQLLHVVGQKESKTWDSLPKSALDGRRVKKLGE 304
Query: 377 GVYGEVF--LWRARDGRARVMKIVP 445
G YGEVF +W DG+ +KIVP
Sbjct: 305 GAYGEVFSTIW---DGKPVAIKIVP 326
>L14745-8|AAA27923.1| 244|Caenorhabditis elegans Tetraspanin family
protein 1 protein.
Length = 244
Score = 29.1 bits (62), Expect = 1.7
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +3
Query: 210 SMMWNRRSPF*V-YMILRIVLLQLEITCYVDAIKR 311
S +W +R F + Y++L IVL+ LEI C V + R
Sbjct: 91 SSVWPKRKGFMITYLVLIIVLVSLEIGCGVAVLVR 125
>AC024751-3|AAK21513.2| 440|Caenorhabditis elegans Hypothetical
protein Y18H1A.10 protein.
Length = 440
Score = 29.1 bits (62), Expect = 1.7
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +2
Query: 287 VLRRCNQTDAILFDECYPDAL-LKNCHKIGEGVYGEVF--LWRARDGRARVMKIVP 445
+LR Q +A + AL + K+GEG YGEVF +W +GR +K++P
Sbjct: 83 LLRVVGQKEAKPWGSLPTSALDARKVKKLGEGAYGEVFSTVW---NGRPVAIKVLP 135
>U41549-1|AAA83281.1| 299|Caenorhabditis elegans Hypothetical
protein F22F1.2 protein.
Length = 299
Score = 28.3 bits (60), Expect = 3.0
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +2
Query: 365 KIGEGVYGEVFLWR-ARDGRARVMKIVPIAGHTKVNG 472
K+GEG YG+V+ R R+ + V+K++ H ++NG
Sbjct: 16 KLGEGSYGDVYFCRDERNNKWSVIKLI----HKEING 48
>Z49131-2|CAA88975.1| 321|Caenorhabditis elegans Hypothetical
protein ZC373.3 protein.
Length = 321
Score = 27.9 bits (59), Expect = 4.0
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 353 KNCHKIGEGVYGEVFLWRARDG-RARVMKIVPI 448
K HK+G G +GEV W+A D V KIV I
Sbjct: 37 KLIHKVGSGSFGEV--WQATDKLEGNVAKIVKI 67
>Z48583-1|CAA88470.1| 389|Caenorhabditis elegans Hypothetical
protein F54B3.2 protein.
Length = 389
Score = 27.9 bits (59), Expect = 4.0
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 173 CDDTIVGLSKLSLDDVEPEITVLGIHDTSN-RVATARDYV 289
C D +GLS LS PEI VL H++++ R+ +A D V
Sbjct: 49 CHDVPLGLSNLSTITNIPEIVVLREHNSNDIRMTSALDDV 88
>Z66521-10|CAH10788.1| 359|Caenorhabditis elegans Hypothetical
protein W02B12.12b protein.
Length = 359
Score = 27.5 bits (58), Expect = 5.3
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = -1
Query: 260 SKYHVYLER*SPVPHHRARVLITRQSYHHNRRSKIL*DHHRQ*MD 126
+K+ Y P H R + ++ S HH+ S +HHR+ D
Sbjct: 29 TKHSTYSTSKHPTTHTRTSYMPSKSSQHHHPASSSHHNHHRKRSD 73
>Z66521-9|CAA91402.1| 367|Caenorhabditis elegans Hypothetical
protein W02B12.12a protein.
Length = 367
Score = 27.5 bits (58), Expect = 5.3
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = -1
Query: 260 SKYHVYLER*SPVPHHRARVLITRQSYHHNRRSKIL*DHHRQ*MD 126
+K+ Y P H R + ++ S HH+ S +HHR+ D
Sbjct: 29 TKHSTYSTSKHPTTHTRTSYMPSKSSQHHHPASSSHHNHHRKRSD 73
>U70845-4|AAB09102.1| 340|Caenorhabditis elegans Hypothetical
protein F22H10.5 protein.
Length = 340
Score = 27.5 bits (58), Expect = 5.3
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2
Query: 353 KNCHKIGEGVYGEVFLWRARDGRARVMKIVP 445
KN KIGEG Y E F + ++ VMK++P
Sbjct: 94 KNIAKIGEGCYAEAFS-TIFNNQSVVMKVLP 123
>U39854-2|AAA81077.2| 703|Caenorhabditis elegans Puf (pumilio/fbf)
domain-containingprotein 9 protein.
Length = 703
Score = 27.1 bits (57), Expect = 7.0
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = -1
Query: 362 DSFSKVRLDSIHQIV*HPFDCIDVTRNLEL*QHDSKYHV 246
D+F+K D+++ + HP+ C + R LE + K V
Sbjct: 485 DAFTKNNSDNVYTLSVHPYGCRVIQRVLEYCNEEQKQPV 523
>U58743-1|AAB00613.1| 298|Caenorhabditis elegans Hypothetical
protein F39F10.3 protein.
Length = 298
Score = 26.6 bits (56), Expect = 9.2
Identities = 12/26 (46%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = +2
Query: 368 IGEGVYGEVFLWR-ARDGRARVMKIV 442
+G+G+YGEV L + R+ ARV K++
Sbjct: 16 LGKGMYGEVHLCKDDRNNEARVAKLI 41
>U56961-1|AAK39295.1| 118|Caenorhabditis elegans Hypothetical
protein T19D7.3 protein.
Length = 118
Score = 26.6 bits (56), Expect = 9.2
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = -3
Query: 165 LKNPLRSSQAVDGHKLVLVLLGS 97
LKNPL S VDG +V LLGS
Sbjct: 78 LKNPLPSMNLVDGMPVVPGLLGS 100
>U53153-3|AAC69038.1| 653|Caenorhabditis elegans Germinal center
kinase family protein1, isoform a protein.
Length = 653
Score = 26.6 bits (56), Expect = 9.2
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +2
Query: 311 DAILFDECYPDALLKNCHKIGEGVYGEVFLW-RARDGRARVMKIVPI 448
D I + P+ + +IG G +GEV+ R GR +KI+ +
Sbjct: 21 DRIYIQKLDPEVIFTKQERIGRGSFGEVYKGIDNRTGRVVAIKIIDL 67
>U00045-2|AAL02501.1| 1004|Caenorhabditis elegans Temporarily
assigned gene nameprotein 204, isoform a protein.
Length = 1004
Score = 26.6 bits (56), Expect = 9.2
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = -2
Query: 451 SNWNYFHYSSSAISSTPKKYF 389
S+ NY+H SS ++ P++Y+
Sbjct: 640 SSHNYYHQSSDPVAPPPRRYY 660
>U00045-1|AAM29684.1| 1099|Caenorhabditis elegans Temporarily
assigned gene nameprotein 204, isoform c protein.
Length = 1099
Score = 26.6 bits (56), Expect = 9.2
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = -2
Query: 451 SNWNYFHYSSSAISSTPKKYF 389
S+ NY+H SS ++ P++Y+
Sbjct: 735 SSHNYYHQSSDPVAPPPRRYY 755
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,871,762
Number of Sequences: 27780
Number of extensions: 218873
Number of successful extensions: 746
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 871571276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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