Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21i11
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    23   1.9  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    23   1.9  
DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    21   5.7  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   5.7  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    21   10.0 

>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 4/36 (11%)
 Frame = +1

Query: 250 DNYPPMDLGLDNTLANVTP---FAVETE-SCRRQVD 345
           D +PP D G  ++L N+ P   F V T   C R ++
Sbjct: 80  DKHPPKDFGDVDSLGNLDPANEFIVSTRVRCGRSLE 115


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 4/36 (11%)
 Frame = +1

Query: 250 DNYPPMDLGLDNTLANVTP---FAVETE-SCRRQVD 345
           D +PP D G  ++L N+ P   F V T   C R ++
Sbjct: 96  DKHPPKDFGDVDSLGNLDPANEFIVSTRVRCGRSLE 131


>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -1

Query: 183 FLGLDYQTFRHRLQVIRQQHTGVWTPLGQGG 91
           FL   YQT +  ++ +R+Q  G+ + + + G
Sbjct: 36  FLDGWYQTLQTHMKKVREQMAGILSRIPEQG 66


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +1

Query: 436  GPETAVDVDDID 471
            GP T++ VDD+D
Sbjct: 978  GPPTSIRVDDLD 989


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 259 PPMDLGLDNTLANVTP 306
           P +  GLD +L++VTP
Sbjct: 428 PTVMSGLDESLSDVTP 443


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,475
Number of Sequences: 438
Number of extensions: 2693
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)