Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21i10
         (631 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0022 + 21592403-21593083,21593720-21594208                       29   3.0  
09_02_0226 - 6007656-6008063,6012166-6012678                           29   4.0  
03_02_0281 - 7069847-7069876,7070152-7070218,7071320-7071445,707...    29   4.0  
02_05_0336 + 28033315-28033365,28033580-28033585,28033798-280338...    29   4.0  
07_01_1179 + 11184521-11184536,11184593-11184691,11184790-111848...    28   5.3  
05_01_0325 - 2552808-2553895,2553999-2554300,2555014-2555447           28   5.3  
01_06_1412 - 37140654-37141088,37141549-37142214                       28   5.3  
11_01_0144 + 1187532-1187813,1188913-1189454,1189621-1189707,119...    28   7.0  

>05_05_0022 + 21592403-21593083,21593720-21594208
          Length = 389

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
 Frame = +1

Query: 532 GPCFCSCE-CTFGFTRKNNVLYHMW-RLRKYWRGP 630
           GP    C  C   F R NN+  HMW   R+Y +GP
Sbjct: 207 GPVQFVCHVCNKAFNRYNNMQMHMWGHGREYRKGP 241


>09_02_0226 - 6007656-6008063,6012166-6012678
          Length = 306

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
 Frame = +1

Query: 532 GPCFCSCE-CTFGFTRKNNVLYHMW-RLRKYWRGP 630
           GP   +C  C   F+R NN+  HMW    +Y RGP
Sbjct: 151 GPTHFACPVCCKTFSRYNNLQMHMWGHGSQYRRGP 185


>03_02_0281 -
           7069847-7069876,7070152-7070218,7071320-7071445,
           7071727-7071916,7072008-7072110
          Length = 171

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
 Frame = -3

Query: 575 LVNPNVHSQEQKHGPLSVKLALIFPLISSTVSIILQQPF-CRS--DKSRRIPWSGLQLFF 405
           L + N+  +   H  L ++  +I P + +      Q    CR+  DKS R P SG + FF
Sbjct: 56  LADYNIQKESTLHLVLRLRGGIIEPSLQALARKYNQDKMICRNFKDKSLRSPLSGPEAFF 115

Query: 404 SE 399
           SE
Sbjct: 116 SE 117


>02_05_0336 +
           28033315-28033365,28033580-28033585,28033798-28033884,
           28034741-28034830,28035736-28037778,28037916-28038062,
           28038148-28038560,28038656-28038755
          Length = 978

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +1

Query: 520 LTDKGPCFCS-CECTFGFTRKNNVLYH 597
           L+ K    CS C+ TFGFTRK +  Y+
Sbjct: 551 LSSKDQSVCSNCQLTFGFTRKKHNCYN 577


>07_01_1179 +
           11184521-11184536,11184593-11184691,11184790-11184852,
           11185011-11185084,11185187-11185261,11185371-11185514,
           11185629-11185733,11185839-11186276,11187102-11188241,
           11188320-11188493
          Length = 775

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 25/83 (30%), Positives = 34/83 (40%), Gaps = 3/83 (3%)
 Frame = +1

Query: 376 NPQCEKTNSEKNNCKPDHGIRLDLSDLQKGCCNII-ETVDEIS-GKINANLTDKGPCFCS 549
           N    +T S+K N +    +        K  CN   ETVDE + G+   N      C C 
Sbjct: 279 NVHSARTTSKKRNREVIR-VTFKCYKYVKADCNTKPETVDETATGERKTNEVIGTECKCV 337

Query: 550 CECTFGFTRKN-NVLYHMWRLRK 615
            +    F  +  N L HMW +RK
Sbjct: 338 MDMIQEFNLQEINFLAHMWHIRK 360


>05_01_0325 - 2552808-2553895,2553999-2554300,2555014-2555447
          Length = 607

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +1

Query: 448 SDLQKGCCNIIETVDEISGKINANLTDKGPCFC 546
           SDLQK C   IE  DE+    + +L D  P  C
Sbjct: 220 SDLQKLCSLAIERADELLSSPDLHLQDSLPAAC 252


>01_06_1412 - 37140654-37141088,37141549-37142214
          Length = 366

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
 Frame = +1

Query: 532 GPCFCSCE-CTFGFTRKNNVLYHMW-RLRKYWRGP 630
           GP    C  C   F R NN+  HMW   R+Y +GP
Sbjct: 202 GPVQFICHVCNKTFNRYNNMQMHMWGHGREYRKGP 236


>11_01_0144 +
           1187532-1187813,1188913-1189454,1189621-1189707,
           1190151-1190260,1190346-1190464,1190548-1190634,
           1191554-1191853
          Length = 508

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -3

Query: 605 LHMWYNTLFFLVNPNVHSQEQKHGPLSVKLALIF 504
           L +WYNT+  L+   + + E     LS+ LA IF
Sbjct: 276 LELWYNTILVLLTGYMKNAEVALDALSICLAYIF 309


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,892,303
Number of Sequences: 37544
Number of extensions: 245057
Number of successful extensions: 623
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 614
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 623
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1537558360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)