Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21i10
         (631 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF085244-1|AAD55329.1| 1845|Homo sapiens C2H2 type Kruppel-like ...    32   1.9  
AB208834-1|BAD92071.1| 1387|Homo sapiens Zinc finger protein 236...    32   1.9  
AB065458-1|BAC05718.1|  316|Homo sapiens seven transmembrane hel...    31   4.5  
BC000573-1|AAH00573.1|  139|Homo sapiens cornichon homolog 4 (Dr...    30   5.9  
AK222634-1|BAD96354.1|  139|Homo sapiens HSPC163 protein variant...    30   5.9  

>AF085244-1|AAD55329.1| 1845|Homo sapiens C2H2 type Kruppel-like zinc
            finger protein splice variant b protein.
          Length = 1845

 Score = 31.9 bits (69), Expect = 1.9
 Identities = 32/119 (26%), Positives = 50/119 (42%), Gaps = 5/119 (4%)
 Frame = +1

Query: 277  AVTRAGERKLENQSNR--PSLSEEKIGLLNITKCDNPQCEKTNSEKNNCKPDHGIRLDLS 450
            A  RA   K   Q+++  PSLS +K     + KCD   CEK  ++ +  +    I     
Sbjct: 1694 AFKRATHLKEHMQTHQAGPSLSSQKP---RVFKCDT--CEKAFAKPSQLERHSRIHTGER 1748

Query: 451  DLQKGCCNIIETVDEISGKINANL---TDKGPCFCSCECTFGFTRKNNVLYHMWRLRKY 618
                  C + E        +  ++   T + P  C+  C  GFT+K+N+  HM R   Y
Sbjct: 1749 PFH---CTLCEKAFNQKSALQVHMKKHTGERPYKCAY-CVMGFTQKSNMKLHMKRAHSY 1803


>AB208834-1|BAD92071.1| 1387|Homo sapiens Zinc finger protein 236
            variant protein.
          Length = 1387

 Score = 31.9 bits (69), Expect = 1.9
 Identities = 32/119 (26%), Positives = 50/119 (42%), Gaps = 5/119 (4%)
 Frame = +1

Query: 277  AVTRAGERKLENQSNR--PSLSEEKIGLLNITKCDNPQCEKTNSEKNNCKPDHGIRLDLS 450
            A  RA   K   Q+++  PSLS +K     + KCD   CEK  ++ +  +    I     
Sbjct: 1236 AFKRATHLKEHMQTHQAGPSLSSQKP---RVFKCDT--CEKAFAKPSQLERHSRIHTGER 1290

Query: 451  DLQKGCCNIIETVDEISGKINANL---TDKGPCFCSCECTFGFTRKNNVLYHMWRLRKY 618
                  C + E        +  ++   T + P  C+  C  GFT+K+N+  HM R   Y
Sbjct: 1291 PFH---CTLCEKAFNQKSALQVHMKKHTGERPYKCAY-CVMGFTQKSNMKLHMKRAHSY 1345


>AB065458-1|BAC05718.1|  316|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 316

 Score = 30.7 bits (66), Expect = 4.5
 Identities = 12/43 (27%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
 Frame = -3

Query: 617 YFRNLHMWYNTLFFL-VNPNVHSQEQKHGPLSVKLALIFPLIS 492
           +F ++ ++Y +LFF+ V PN+  +  K  P ++   ++ PL++
Sbjct: 244 HFLSVSLFYGSLFFMYVRPNLLEEGDKDIPAAILFTIVVPLLN 286


>BC000573-1|AAH00573.1|  139|Homo sapiens cornichon homolog 4
           (Drosophila) protein.
          Length = 139

 Score = 30.3 bits (65), Expect = 5.9
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -3

Query: 152 KSHFLKTLSNTGFFLNCFLVNLYHMIFSL 66
           KSH  + +   GF L CF + LY MI +L
Sbjct: 108 KSHMKEAMIKLGFHLLCFFMYLYSMILAL 136


>AK222634-1|BAD96354.1|  139|Homo sapiens HSPC163 protein variant
           protein.
          Length = 139

 Score = 30.3 bits (65), Expect = 5.9
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -3

Query: 152 KSHFLKTLSNTGFFLNCFLVNLYHMIFSL 66
           KSH  + +   GF L CF + LY MI +L
Sbjct: 108 KSHMKEAMIKLGFHLLCFFMYLYSMILAL 136


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,443,919
Number of Sequences: 237096
Number of extensions: 1407821
Number of successful extensions: 3010
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3010
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6860268620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)