BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte21i10
(631 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT025848-1|ABF85748.1| 1384|Drosophila melanogaster IP14838p pro... 29 6.9
BT021360-1|AAX33508.1| 1458|Drosophila melanogaster LP14662p pro... 29 6.9
AE014134-124|AAS64635.1| 1503|Drosophila melanogaster CG11838-PB... 29 6.9
AE014134-123|AAF51483.1| 1443|Drosophila melanogaster CG11838-PA... 29 6.9
AE013599-682|AAX52717.1| 717|Drosophila melanogaster CG8732-PD,... 28 9.1
>BT025848-1|ABF85748.1| 1384|Drosophila melanogaster IP14838p
protein.
Length = 1384
Score = 28.7 bits (61), Expect = 6.9
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Frame = +1
Query: 388 EKTNSEKNNCKPDHGIRLDLSDL---QKGCCNIIET 486
+KT +KN+ +P H ++ + L +KGC N++ET
Sbjct: 607 QKTLPQKNSLQPSHFVQSKVVLLFYSEKGCLNVLET 642
>BT021360-1|AAX33508.1| 1458|Drosophila melanogaster LP14662p
protein.
Length = 1458
Score = 28.7 bits (61), Expect = 6.9
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Frame = +1
Query: 388 EKTNSEKNNCKPDHGIRLDLSDL---QKGCCNIIET 486
+KT +KN+ +P H ++ + L +KGC N++ET
Sbjct: 681 QKTLPQKNSLQPSHFVQSKVVLLFYSEKGCLNVLET 716
>AE014134-124|AAS64635.1| 1503|Drosophila melanogaster CG11838-PB,
isoform B protein.
Length = 1503
Score = 28.7 bits (61), Expect = 6.9
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Frame = +1
Query: 388 EKTNSEKNNCKPDHGIRLDLSDL---QKGCCNIIET 486
+KT +KN+ +P H ++ + L +KGC N++ET
Sbjct: 726 QKTLPQKNSLQPSHFVQSKVVLLFYSEKGCLNVLET 761
>AE014134-123|AAF51483.1| 1443|Drosophila melanogaster CG11838-PA,
isoform A protein.
Length = 1443
Score = 28.7 bits (61), Expect = 6.9
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Frame = +1
Query: 388 EKTNSEKNNCKPDHGIRLDLSDL---QKGCCNIIET 486
+KT +KN+ +P H ++ + L +KGC N++ET
Sbjct: 666 QKTLPQKNSLQPSHFVQSKVVLLFYSEKGCLNVLET 701
>AE013599-682|AAX52717.1| 717|Drosophila melanogaster CG8732-PD,
isoform D protein.
Length = 717
Score = 28.3 bits (60), Expect = 9.1
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = -3
Query: 599 MWYNTLFFLVNPNVHSQEQKHGPLSVKLALIFPLISSTVSIILQQPFCRSDKSRRI 432
M YN+L + V + Q G + +A ++ +I+ V ++LQ+P+ R SRR+
Sbjct: 1 MKYNSLSYCVMDSFWVQSAI-GAIKA-IAFVYDIITLPVYLVLQKPWKRRQDSRRV 54
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,191,983
Number of Sequences: 53049
Number of extensions: 455756
Number of successful extensions: 1380
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1316
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1380
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2621070450
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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