Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21i10
         (631 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    27   0.20 
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    23   2.4  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   4.3  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   4.3  
AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.          22   4.3  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    21   7.5  
EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    21   9.9  
AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex det...    21   9.9  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   9.9  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 26.6 bits (56), Expect = 0.20
 Identities = 15/49 (30%), Positives = 21/49 (42%)
 Frame = +1

Query: 400 SEKNNCKPDHGIRLDLSDLQKGCCNIIETVDEISGKINANLTDKGPCFC 546
           SE  NC     + +  +   K C NI   ++  S K+   LT  G  FC
Sbjct: 90  SENKNCNAG-SLTVKKNFANKYCGNITLNIESTSNKMTVILTPPGRFFC 137


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -3

Query: 500 LISSTVSIILQQPFCRSDKSRRIPWSGLQL 411
           +I + ++ IL   FC  D   RIP++G+Q+
Sbjct: 275 MIIANLNFILHL-FCLLDVQWRIPFNGIQM 303


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 177 ITANSFKTGSSDKEFLLKVK 236
           + A  + T ++DK+FLLK K
Sbjct: 19  VGAEYYDTKTADKDFLLKQK 38


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 177 ITANSFKTGSSDKEFLLKVK 236
           + A  + T ++DK+FLLK K
Sbjct: 19  VGAEYYDTKTADKDFLLKQK 38


>AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.
          Length = 147

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 7/28 (25%), Positives = 15/28 (53%)
 Frame = +1

Query: 535 PCFCSCECTFGFTRKNNVLYHMWRLRKY 618
           PC+C+CE       +  V+    +L+++
Sbjct: 1   PCYCTCEKCKITANRQQVMRQNMKLKRH 28


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 10/47 (21%), Positives = 23/47 (48%)
 Frame = +1

Query: 274 IAVTRAGERKLENQSNRPSLSEEKIGLLNITKCDNPQCEKTNSEKNN 414
           +A++   ++ + N  N   ++   +G        N +C K+N++ NN
Sbjct: 380 LALSNRMQKIVNNDFNFDEVNFRILGANVNNLIKNTRCAKSNNQNNN 426


>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 522 QISVNFSTNFVNCF 481
           Q+ VNF  N++N F
Sbjct: 33  QLEVNFDGNYINNF 46


>AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -3

Query: 161 RIRKSHFLKTLSNTGFFLNCFLVNLYHMIFSLE 63
           R R+   + +LSN     N +   LY+ I ++E
Sbjct: 308 RSREPKIISSLSNNTIHNNNYNKKLYYNIINIE 340


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 437 RIPWSGLQLFFSEFVFSHWGL 375
           RI WS LQ+F   +V +  G+
Sbjct: 129 RIQWSKLQVFDCRYVTTTSGM 149


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,398
Number of Sequences: 438
Number of extensions: 3007
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18826962
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)