Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte21i04
(475 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82095-7|CAN86628.1| 390|Caenorhabditis elegans Hypothetical pr... 31 0.56
Z82095-6|CAI79281.2| 412|Caenorhabditis elegans Hypothetical pr... 31 0.56
Z82095-5|CAB05026.2| 414|Caenorhabditis elegans Hypothetical pr... 31 0.56
U97550-1|AAK18983.2| 1065|Caenorhabditis elegans Hypothetical pr... 29 2.3
AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical ... 29 2.3
AL132860-32|CAO82074.1| 570|Caenorhabditis elegans Hypothetical... 27 5.2
AL132860-31|CAB60519.2| 457|Caenorhabditis elegans Hypothetical... 27 5.2
AF100304-4|AAC68910.1| 568|Caenorhabditis elegans Gex interacti... 27 9.1
AF100304-2|AAU20837.1| 564|Caenorhabditis elegans Gex interacti... 27 9.1
AF100304-1|AAC68913.1| 545|Caenorhabditis elegans Gex interacti... 27 9.1
>Z82095-7|CAN86628.1| 390|Caenorhabditis elegans Hypothetical
protein ZK849.2c protein.
Length = 390
Score = 30.7 bits (66), Expect = 0.56
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +2
Query: 14 KSVEKKILAAMNKECKKREKTASNLNESIKAKLKESLTQ 130
K VE+ ++ + +C+ KTA + ++ IK KL+ LTQ
Sbjct: 100 KEVEQLMIQVHSLQCQLHSKTAPHESDMIKKKLETQLTQ 138
>Z82095-6|CAI79281.2| 412|Caenorhabditis elegans Hypothetical
protein ZK849.2b protein.
Length = 412
Score = 30.7 bits (66), Expect = 0.56
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +2
Query: 14 KSVEKKILAAMNKECKKREKTASNLNESIKAKLKESLTQ 130
K VE+ ++ + +C+ KTA + ++ IK KL+ LTQ
Sbjct: 122 KEVEQLMIQVHSLQCQLHSKTAPHESDMIKKKLETQLTQ 160
>Z82095-5|CAB05026.2| 414|Caenorhabditis elegans Hypothetical
protein ZK849.2a protein.
Length = 414
Score = 30.7 bits (66), Expect = 0.56
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +2
Query: 14 KSVEKKILAAMNKECKKREKTASNLNESIKAKLKESLTQ 130
K VE+ ++ + +C+ KTA + ++ IK KL+ LTQ
Sbjct: 124 KEVEQLMIQVHSLQCQLHSKTAPHESDMIKKKLETQLTQ 162
>U97550-1|AAK18983.2| 1065|Caenorhabditis elegans Hypothetical
protein T20F7.5 protein.
Length = 1065
Score = 28.7 bits (61), Expect = 2.3
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = +2
Query: 11 MKSVEKKILAAMNKECKKREKTASNLNESIKAKLKES 121
+K+++KK+L +NKE KKR K + E+ K+ +K S
Sbjct: 840 LKNLKKKLLNKLNKEKKKRSK--KSRFEATKSNIKVS 874
>AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical
protein Y54E2A.8 protein.
Length = 485
Score = 28.7 bits (61), Expect = 2.3
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +1
Query: 160 KSNFKNETE*REEGGILQLQEHVVAKRGVARRRPTEESEQTHEKTCEKCQNQK 318
K K E + R G+LQL+ + +RR E E+ E+ EK + +K
Sbjct: 283 KEKLKKELDRRPNDGVLQLETEDFDWKPRRKRRKELEKEREAEEAAEKRKKEK 335
>AL132860-32|CAO82074.1| 570|Caenorhabditis elegans Hypothetical
protein Y56A3A.7b protein.
Length = 570
Score = 27.5 bits (58), Expect = 5.2
Identities = 12/47 (25%), Positives = 25/47 (53%)
Frame = +2
Query: 59 KKREKTASNLNESIKAKLKESLTQNTVVTGDTASNQISRTRQSNVKK 199
+++EK + E+IK ++++ NT++ AS R R ++K
Sbjct: 274 EEKEKRREEIRENIKKEMEKKEQVNTLIREKLASMNARRKRLQEIRK 320
>AL132860-31|CAB60519.2| 457|Caenorhabditis elegans Hypothetical
protein Y56A3A.7a protein.
Length = 457
Score = 27.5 bits (58), Expect = 5.2
Identities = 12/47 (25%), Positives = 25/47 (53%)
Frame = +2
Query: 59 KKREKTASNLNESIKAKLKESLTQNTVVTGDTASNQISRTRQSNVKK 199
+++EK + E+IK ++++ NT++ AS R R ++K
Sbjct: 274 EEKEKRREEIRENIKKEMEKKEQVNTLIREKLASMNARRKRLQEIRK 320
>AF100304-4|AAC68910.1| 568|Caenorhabditis elegans Gex interacting
protein protein4, isoform b protein.
Length = 568
Score = 26.6 bits (56), Expect = 9.1
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 190 REEGGILQLQEHVVAKRGVARRRPTEESEQTHEKT 294
R E L+ Q +R VA++ P EES +HE++
Sbjct: 347 RAEAARLRYQRMTPDQRKVAKQEPKEESWPSHEQS 381
>AF100304-2|AAU20837.1| 564|Caenorhabditis elegans Gex interacting
protein protein4, isoform f protein.
Length = 564
Score = 26.6 bits (56), Expect = 9.1
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 190 REEGGILQLQEHVVAKRGVARRRPTEESEQTHEKT 294
R E L+ Q +R VA++ P EES +HE++
Sbjct: 343 RAEAARLRYQRMTPDQRKVAKQEPKEESWPSHEQS 377
>AF100304-1|AAC68913.1| 545|Caenorhabditis elegans Gex interacting
protein protein4, isoform a protein.
Length = 545
Score = 26.6 bits (56), Expect = 9.1
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 190 REEGGILQLQEHVVAKRGVARRRPTEESEQTHEKT 294
R E L+ Q +R VA++ P EES +HE++
Sbjct: 324 RAEAARLRYQRMTPDQRKVAKQEPKEESWPSHEQS 358
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,908,441
Number of Sequences: 27780
Number of extensions: 155909
Number of successful extensions: 458
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 458
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 860942358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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