Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21h24
         (605 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-3661|AAN14025.1|  477|Drosophila melanogaster CG31381-P...    79   4e-15
BT003221-1|AAO24976.1|  534|Drosophila melanogaster RE03224p pro...    40   0.003
AJ252086-1|CAB64598.2|  534|Drosophila melanogaster spaghetti pr...    40   0.003
AE013599-3831|AAF47175.1|  534|Drosophila melanogaster CG13570-P...    40   0.003
X04513-1|CAA28197.1|  430|Drosophila melanogaster protein ( Dros...    29   6.5  

>AE014297-3661|AAN14025.1|  477|Drosophila melanogaster CG31381-PA
           protein.
          Length = 477

 Score = 79.4 bits (187), Expect = 4e-15
 Identities = 51/141 (36%), Positives = 75/141 (53%), Gaps = 26/141 (18%)
 Frame = +1

Query: 244 YTKGVFQTLGFKEFHDYLM---MSEDERNSEA---------------------GKKLLKT 351
           YT GV QT+G+KEF  YL+     +DE+  E                      G +LL+ 
Sbjct: 254 YTSGVLQTIGYKEFIPYLIKYDQQQDEKIEEYLKTHSYKLPGPEKLKEEGLPDGLELLRN 313

Query: 352 SIENMKMATRRYARRQNKMFRQRFLEHPRREVPLVYELDTTDVTKWDENVKNKAIKIIES 531
             E +K+ TRRY+++Q K    RFL    R+VP +YELDT+DV+ W   V  +A  IIES
Sbjct: 314 CCEELKLVTRRYSKKQLKWINNRFLASKDRQVPDLYELDTSDVSAWQVAVYKRAETIIES 373

Query: 532 FINSTDSDVLPI--KQHLQSD 588
           + N    ++LP+  ++H  +D
Sbjct: 374 YRNEEACEILPMAKREHPGAD 394


>BT003221-1|AAO24976.1|  534|Drosophila melanogaster RE03224p
           protein.
          Length = 534

 Score = 39.9 bits (89), Expect = 0.003
 Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
 Frame = +1

Query: 397 QNKMFR-QRFLEHPRREVPLVYELDTTDVTKWDENVKNKAIKIIESFINSTDSDVLPIKQ 573
           Q K F  QR +    RE    YE    D+  W++++KNK  ++ +S +++ + D LP++ 
Sbjct: 4   QEKAFELQRQVRQNARE----YENSVKDLYSWEQDIKNKEKELQKSPLSAANKD-LPVRS 58

Query: 574 HLQSDK 591
           H+Q+DK
Sbjct: 59  HVQTDK 64


>AJ252086-1|CAB64598.2|  534|Drosophila melanogaster spaghetti
           protein.
          Length = 534

 Score = 39.9 bits (89), Expect = 0.003
 Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
 Frame = +1

Query: 397 QNKMFR-QRFLEHPRREVPLVYELDTTDVTKWDENVKNKAIKIIESFINSTDSDVLPIKQ 573
           Q K F  QR +    RE    YE    D+  W++++KNK  ++ +S +++ + D LP++ 
Sbjct: 4   QEKAFELQRQVRQNARE----YENSVKDLYSWEQDIKNKEKELQKSPLSAANKD-LPVRS 58

Query: 574 HLQSDK 591
           H+Q+DK
Sbjct: 59  HVQTDK 64


>AE013599-3831|AAF47175.1|  534|Drosophila melanogaster CG13570-PA
           protein.
          Length = 534

 Score = 39.9 bits (89), Expect = 0.003
 Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
 Frame = +1

Query: 397 QNKMFR-QRFLEHPRREVPLVYELDTTDVTKWDENVKNKAIKIIESFINSTDSDVLPIKQ 573
           Q K F  QR +    RE    YE    D+  W++++KNK  ++ +S +++ + D LP++ 
Sbjct: 4   QEKAFELQRQVRQNARE----YENSVKDLYSWEQDIKNKEKELQKSPLSAANKD-LPVRS 58

Query: 574 HLQSDK 591
           H+Q+DK
Sbjct: 59  HVQTDK 64


>X04513-1|CAA28197.1|  430|Drosophila melanogaster protein (
           Drosophila snake locusmRNA for serine protease. ).
          Length = 430

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
 Frame = +1

Query: 61  LRTQNINKKPSATL*I*CQQISIAYRRFQFNI-SGKNTGGYRFTRGYCRFVTSSPPHKRS 237
           LR  +++  P  T    C+QI    RR    I  G+   GY   +G+C+  +  P H   
Sbjct: 329 LRQVDLDVSPQMT----CKQIYRKERRLPRGIIEGQFCAGYLQAQGHCQGDSGGPIHALL 384

Query: 238 PDYTKGVFQTLGFKEF 285
           P+Y    F  +G   F
Sbjct: 385 PEYNCVAF-VVGITSF 399


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,930,663
Number of Sequences: 53049
Number of extensions: 609468
Number of successful extensions: 1789
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1786
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2482967880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)