Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte21h22
(474 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0641 - 4697273-4697672,4697921-4698102,4698218-4698403,469... 150 5e-37
04_04_0075 - 22542486-22542882,22543181-22543362,22543452-225436... 146 6e-36
02_04_0319 - 22006550-22006952,22007260-22007441,22007522-220077... 141 2e-34
06_03_0968 - 26402154-26403834,26404322-26404383,26404473-264046... 89 1e-18
06_01_0588 - 4224348-4224516,4224674-4224767,4224872-4225490,422... 79 2e-15
08_02_1014 - 23586552-23587224,23587402-23587463,23587735-235879... 78 3e-15
02_05_1059 + 33815979-33816235,33816467-33816732,33817149-338171... 74 7e-14
09_04_0435 - 17545879-17546605,17546721-17546782,17547123-175473... 73 2e-13
02_02_0236 + 8135641-8135795,8136167-8136557,8136640-8136931,813... 71 5e-13
05_06_0033 + 25074301-25074393,25074680-25075203,25076367-250764... 69 2e-12
03_01_0658 + 4818401-4818540,4818605-4819201,4819694-4819949,482... 64 6e-11
02_05_0382 + 28491318-28491374,28492031-28492114,28492249-284922... 60 9e-10
11_06_0151 - 20643032-20643085,20643202-20643307,20643415-206434... 54 6e-08
12_02_0381 + 18376045-18376114,18376270-18376420,18376524-183766... 52 2e-07
04_04_1365 - 32967604-32968367,32969097-32969221,32969583-32969632 52 2e-07
01_06_0864 - 32546696-32546803,32546881-32546961,32547134-325472... 51 5e-07
12_02_1151 + 26488686-26488792,26488897-26489142,26490246-264903... 47 9e-06
10_01_0345 - 3811057-3811236,3811342-3811615,3811732-3812289,381... 47 9e-06
11_04_0281 + 15733505-15733647,15734366-15734443,15734835-157350... 46 2e-05
07_01_0426 + 3239274-3239386,3239472-3239702,3242516-3242642,324... 45 4e-05
09_02_0557 + 10639845-10639900,10640372-10640647,10640998-10641283 37 0.010
07_01_0454 + 3443871-3444024,3444268-3444356,3445482-3445557,344... 33 0.16
06_02_0244 - 13445023-13445400,13445495-13446823 30 1.1
03_05_0383 + 23656041-23656096,23657189-23657255,23657599-236577... 30 1.1
08_02_1337 - 26238506-26238737,26239728-26240703,26241266-26242802 29 1.4
08_02_1331 + 26195949-26196132,26196606-26196710,26197270-261981... 29 1.4
07_03_1573 + 27829967-27830338,27830821-27831510,27831594-278317... 29 2.5
07_01_0021 - 133549-133628,133780-133824,133850-133858,134513-13... 27 7.7
>03_01_0641 -
4697273-4697672,4697921-4698102,4698218-4698403,
4699287-4699385,4700028-4700144,4700698-4700814
Length = 366
Score = 150 bits (364), Expect = 5e-37
Identities = 78/157 (49%), Positives = 101/157 (64%), Gaps = 8/157 (5%)
Frame = +3
Query: 21 YSYLNGHLFCQLLIETLFLTAERNQSTL-------KVQKNNSGE-NVTCNGSVPHNTEPT 176
Y + + H F L+ L E+ + ++KN++G NV NG+ PT
Sbjct: 108 YMHQDAHEFLNFLLNELVDILEKESKVVAEPCENSSLKKNSNGPINVQLNGTKKEPV-PT 166
Query: 177 WVHEIFQGTLTSETRCLNCETVSSKDEHFFDLQVDVGQNTSITHCLKCFSDTETLCNDNK 356
VH+ FQG LT+ETRCL CETV+ +DE FFDL +D+ QN+SIT CLK FS TETL ++K
Sbjct: 167 LVHKCFQGILTNETRCLRCETVTDRDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDK 226
Query: 357 FKCDNCSSYXEAQKRMRVKKLPLILALHLKRFKYMEQ 467
F CD C S EAQKRM++KK P IL +HLKRFKY+EQ
Sbjct: 227 FFCDKCCSLQEAQKRMKIKKPPNILVIHLKRFKYIEQ 263
>04_04_0075 -
22542486-22542882,22543181-22543362,22543452-22543637,
22543959-22544057,22546198-22546314,22547739-22547855
Length = 365
Score = 146 bits (355), Expect = 6e-36
Identities = 77/156 (49%), Positives = 96/156 (61%), Gaps = 7/156 (4%)
Frame = +3
Query: 21 YSYLNGHLFCQLLIETLFLTAERNQSTLKVQKNNSGENVTCNGSVPH-----NTEP--TW 179
Y + + H F L+ L E+ + K +S NG V EP T
Sbjct: 108 YMHQDAHEFLNFLLNELVDILEKESNAAKDSPQSSSPEKVPNGPVQPLANGVRKEPPVTL 167
Query: 180 VHEIFQGTLTSETRCLNCETVSSKDEHFFDLQVDVGQNTSITHCLKCFSDTETLCNDNKF 359
VH+ FQG LT+ETRCL CETV+++DE FFDL VD+ QN+SIT CLK F TETL ++KF
Sbjct: 168 VHKNFQGILTNETRCLRCETVTARDETFFDLSVDIEQNSSITSCLKNFCSTETLNAEDKF 227
Query: 360 KCDNCSSYXEAQKRMRVKKLPLILALHLKRFKYMEQ 467
CD C S EAQKRM++KK P IL +HLKRFKY+EQ
Sbjct: 228 FCDKCCSLQEAQKRMKIKKAPHILVIHLKRFKYIEQ 263
>02_04_0319 -
22006550-22006952,22007260-22007441,22007522-22007704,
22008144-22008242,22008999-22009115,22010476-22010739
Length = 415
Score = 141 bits (342), Expect = 2e-34
Identities = 66/132 (50%), Positives = 87/132 (65%)
Frame = +3
Query: 78 TAERNQSTLKVQKNNSGENVTCNGSVPHNTEPTWVHEIFQGTLTSETRCLNCETVSSKDE 257
TA + T + +N N NG+ T VH FQG LT+ET+CL C+T+++KDE
Sbjct: 183 TANSSPETTPEEVSNGAANALANGA-RERPLVTLVHRTFQGILTNETKCLMCDTITAKDE 241
Query: 258 HFFDLQVDVGQNTSITHCLKCFSDTETLCNDNKFKCDNCSSYXEAQKRMRVKKLPLILAL 437
FFDL +DV QN+S+T CLK F TE L ++KF CD CSS EA KRM++KK P +L +
Sbjct: 242 TFFDLSIDVEQNSSLTSCLKSFFSTEILNGEDKFFCDKCSSLQEAHKRMKIKKAPHVLVI 301
Query: 438 HLKRFKYMEQFN 473
HLKRFKY+EQ +
Sbjct: 302 HLKRFKYVEQLS 313
>06_03_0968 -
26402154-26403834,26404322-26404383,26404473-26404682,
26404776-26404860,26405461-26405618,26405745-26405868,
26405955-26406123,26406202-26406287,26406379-26406467,
26406564-26406735,26407820-26408193
Length = 1069
Score = 89.4 bits (212), Expect = 1e-18
Identities = 44/101 (43%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
Frame = +3
Query: 156 PHNTEPTWVHEIFQGTLTSETRCLNCETVSSKDEHFFDLQVDV-GQNTSITHCLKCFSDT 332
P E T + IF G L S+ +C C VS++ E+ DL V++ G S+ CL F+
Sbjct: 319 PSTQETTLIQHIFGGRLQSQVQCTACGMVSNRYENMMDLTVEIHGDADSLEECLDKFTAV 378
Query: 333 ETLCNDNKFKCDNCSSYXEAQKRMRVKKLPLILALHLKRFK 455
E L DNK+KCD CS Y +AQKR+ V + P IL + LKRF+
Sbjct: 379 EWLDGDNKYKCDGCSDYVKAQKRLTVYQAPNILTITLKRFQ 419
>06_01_0588 -
4224348-4224516,4224674-4224767,4224872-4225490,
4225609-4225734,4225819-4226487,4226728-4226853,
4226940-4227266,4227366-4227439,4228469-4228583,
4228871-4229164
Length = 870
Score = 78.6 bits (185), Expect = 2e-15
Identities = 37/100 (37%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Frame = +3
Query: 156 PHNTEPTWVHEIFQGTLTSETRCLNCETVSSKDEHFFDLQVDVGQNTSITHCLKCFSDTE 335
P E + VH+IF G L S+ +C C S+K + F DL +D+G+ TS+ L+ F+ E
Sbjct: 142 PSAYEKSLVHKIFGGRLRSQVKCTQCSHCSNKFDPFLDLSLDIGKATSLVRALQNFTAEE 201
Query: 336 TLCNDNK-FKCDNCSSYXEAQKRMRVKKLPLILALHLKRF 452
L K ++C C A+K+ + K P +L +HLKRF
Sbjct: 202 LLDGGEKQYQCQRCRKKVVAKKKFTIDKAPYVLTIHLKRF 241
>08_02_1014 -
23586552-23587224,23587402-23587463,23587735-23587950,
23588125-23588209,23589232-23589389,23589505-23589625,
23590081-23590243,23590330-23590415,23590660-23590742,
23590816-23591677,23593266-23593693
Length = 978
Score = 78.2 bits (184), Expect = 3e-15
Identities = 36/97 (37%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
Frame = +3
Query: 168 EPTWVHEIFQGTLTSETRCLNCETVSSKDEHFFDLQVDV-GQNTSITHCLKCFSDTETLC 344
E T + IF G L S+ RC C+ S + E DL V++ G +S+ L+ F+ TE L
Sbjct: 566 ETTLMQLIFGGYLRSKIRCTRCDATSEQHERILDLTVEIDGDISSLEGALERFTSTEVLD 625
Query: 345 NDNKFKCDNCSSYXEAQKRMRVKKLPLILALHLKRFK 455
DNK+KC C S+ A+K++ + + P +L + LKR++
Sbjct: 626 GDNKYKCSRCKSHERAKKKLTISEAPNVLTIALKRYQ 662
>02_05_1059 +
33815979-33816235,33816467-33816732,33817149-33817192,
33817363-33817539,33817638-33817964,33818067-33818192,
33818518-33818622,33818815-33820125,33820221-33820382,
33820416-33820517,33820549-33821272,33821358-33821451,
33821824-33821986
Length = 1285
Score = 73.7 bits (173), Expect = 7e-14
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Frame = +3
Query: 156 PHNTEPTWVHEIFQGTLTSETRCLNCETVSSKDEHFFDLQVDVGQNTSITHCLKCFSDTE 335
P E + VH IF G L S+ RC C S+K + F DL +++ ++ L+ F+ E
Sbjct: 229 PSAYEKSLVHRIFGGLLRSQVRCTTCSHCSNKFDPFLDLSLEIANAATLVKALQHFTAEE 288
Query: 336 TLCNDNK-FKCDNCSSYXEAQKRMRVKKLPLILALHLKRF 452
L K + C++C A+KR ++K P +L +HLKRF
Sbjct: 289 LLDGGEKQYNCEHCRQKVVAKKRFMIEKAPSVLTIHLKRF 328
>09_04_0435 -
17545879-17546605,17546721-17546782,17547123-17547335,
17547506-17547590,17547904-17548061,17548174-17548294,
17548765-17548927,17548973-17549097,17550800-17550888,
17550970-17551636,17552671-17552717,17553506-17553862
Length = 937
Score = 72.5 bits (170), Expect = 2e-13
Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 1/105 (0%)
Frame = +3
Query: 144 NGSVPHNTEPTWVHEIFQGTLTSETRCLNCETVSSKDEHFFDLQVDV-GQNTSITHCLKC 320
NG E T V IF G L S+ +C C+ S + E DL V++ G ++ L
Sbjct: 500 NGVYGLPEETTLVQLIFGGYLRSKIKCTMCQGSSEQCERILDLTVEIDGDINTLEEALHR 559
Query: 321 FSDTETLCNDNKFKCDNCSSYXEAQKRMRVKKLPLILALHLKRFK 455
F+ TE L DN++ C C SY A+K++ + + P IL + LKR++
Sbjct: 560 FTSTEILDGDNRYNCSRCKSYERAKKKLTISEAPNILTIALKRYQ 604
>02_02_0236 +
8135641-8135795,8136167-8136557,8136640-8136931,
8137117-8137271,8137363-8137451,8137623-8137967,
8139046-8139169,8139424-8139581,8139673-8139757,
8140094-8140306,8141314-8141375,8141466-8141951,
8142472-8142568
Length = 883
Score = 70.9 bits (166), Expect = 5e-13
Identities = 35/97 (36%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
Frame = +3
Query: 168 EPTWVHEIFQGTLTSETRCLNCETVSSKDEHFFDLQVDV-GQNTSITHCLKCFSDTETLC 344
E T + ++F G L S+ +CL C S + E+ DL +++ G S+ L F+ E L
Sbjct: 502 ETTLIQQMFGGRLKSKVKCLRCYHESERYENIMDLTLEIHGWVESLQDALTQFTAPEDLD 561
Query: 345 NDNKFKCDNCSSYXEAQKRMRVKKLPLILALHLKRFK 455
+N +KC CS+Y +A+K++ V ++P IL + LKRF+
Sbjct: 562 GENMYKCGRCSAYVKARKQLSVHEVPNILTVVLKRFQ 598
>05_06_0033 +
25074301-25074393,25074680-25075203,25076367-25076442,
25076549-25076641,25077167-25077253,25077338-25078095,
25078447-25078575,25079145-25079265
Length = 626
Score = 68.9 bits (161), Expect = 2e-12
Identities = 30/90 (33%), Positives = 49/90 (54%)
Frame = +3
Query: 186 EIFQGTLTSETRCLNCETVSSKDEHFFDLQVDVGQNTSITHCLKCFSDTETLCNDNKFKC 365
E F G L S+ +CL C+ S+K + D+ +D+ + S+ L F E L NK+ C
Sbjct: 145 ETFGGALLSQVKCLTCKGESNKTDEIMDISLDLPGSNSVADALARFFQPEILEGSNKYSC 204
Query: 366 DNCSSYXEAQKRMRVKKLPLILALHLKRFK 455
+ C A+K++ V + P +L + LKRF+
Sbjct: 205 ERCKKLTSARKQLFVLRAPKVLVIQLKRFE 234
>03_01_0658 +
4818401-4818540,4818605-4819201,4819694-4819949,
4820038-4820723,4821009-4821147,4821378-4821514,
4821805-4822077,4822175-4822382,4822660-4822731,
4823230-4823460,4824269-4824532,4825127-4825268,
4825355-4825467
Length = 1085
Score = 64.1 bits (149), Expect = 6e-11
Identities = 31/111 (27%), Positives = 64/111 (57%), Gaps = 6/111 (5%)
Frame = +3
Query: 147 GSVPHNTEP---TWVHEIFQGTLTSETRCLNC---ETVSSKDEHFFDLQVDVGQNTSITH 308
GS+ H+ P T V +F+G+++ TRC +C SSK E F++L++++ ++
Sbjct: 219 GSLSHSKVPGARTIVQHLFRGSVSHVTRCSSCGRDSEASSKMEDFYELELNIKGLNNLEQ 278
Query: 309 CLKCFSDTETLCNDNKFKCDNCSSYXEAQKRMRVKKLPLILALHLKRFKYM 461
L + TE L +N++ C++C +A + ++++ LP ++ LKR+ ++
Sbjct: 279 SLDDYLSTEALDGENQYFCESCQKRVDATRCIKLRSLPPVVNFQLKRYVFL 329
>02_05_0382 +
28491318-28491374,28492031-28492114,28492249-28492272,
28492398-28492472,28493083-28493157,28493198-28493290,
28493332-28493409,28493690-28493767,28494084-28494147,
28494474-28494655,28494729-28495064,28495148-28495267,
28495434-28495923,28496240-28496502
Length = 672
Score = 60.1 bits (139), Expect = 9e-10
Identities = 28/101 (27%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Frame = +3
Query: 168 EPTWVHEIFQGTLTSETRCLNCETVSSKDEHFFDLQVDVGQNTSITHCLKCFSDTETLCN 347
E + V ++F G L S+ C C S E F DL +++ Q ++ L+ F+ E + +
Sbjct: 255 EESIVKQVFGGRLKSKLTCCECGHCSETYEPFLDLSLEIDQADNLIDALESFTKLERIGD 314
Query: 348 -DNKFKCDNCSSYXEAQKRMRVKKLPLILALHLKRFKYMEQ 467
++K C++C++ K++ + + P ++A+HLKRF +++
Sbjct: 315 AEDKLNCEHCNAKVCKNKQLMLDRSPDVVAIHLKRFTSLDR 355
>11_06_0151 -
20643032-20643085,20643202-20643307,20643415-20643495,
20643588-20643715,20643829-20643903,20644853-20645374,
20646622-20646687,20647990-20648076,20648173-20648247,
20648705-20648821,20648932-20649015,20649152-20649217,
20649352-20649417,20650079-20650150,20650231-20650332,
20650428-20650605,20650700-20650755,20653159-20653269,
20653354-20653422,20653558-20653741,20653826-20653914,
20654070-20654147,20654509-20654631,20654755-20654874,
20654975-20655055,20655285-20655431,20655533-20655611,
20657114-20657223,20659138-20659236,20659467-20659582,
20659673-20659781,20659839-20660069,20660152-20660417,
20661349-20661506,20661601-20661751,20661897-20661966,
20662203-20662232
Length = 1451
Score = 54.0 bits (124), Expect = 6e-08
Identities = 28/93 (30%), Positives = 49/93 (52%)
Frame = +3
Query: 180 VHEIFQGTLTSETRCLNCETVSSKDEHFFDLQVDVGQNTSITHCLKCFSDTETLCNDNKF 359
+ ++F+G + C+N + S++ E F+DLQ+DV + + + E L DNK+
Sbjct: 310 IEKLFEGHHINYIECINVDYKSNRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGDNKY 369
Query: 360 KCDNCSSYXEAQKRMRVKKLPLILALHLKRFKY 458
+N +A+K + P +L L LKRF+Y
Sbjct: 370 HAEN-HGLQDAKKGVLFLDFPPVLQLQLKRFEY 401
>12_02_0381 +
18376045-18376114,18376270-18376420,18376524-18376681,
18378680-18378945,18379025-18379243,18379309-18379417,
18379488-18379603,18379935-18380033,18381447-18381556,
18382928-18383006,18383127-18383273,18383363-18383443,
18383529-18383648,18383902-18384024,18384276-18384353,
18384459-18384547,18384653-18384761,18385018-18385086,
18385200-18385310,18385657-18385712,18385808-18385985,
18386065-18386166,18386243-18386314,18386489-18386554,
18386674-18386739,18386853-18386936,18387080-18387196,
18388077-18388163,18389321-18389341
Length = 1050
Score = 52.4 bits (120), Expect = 2e-07
Identities = 27/93 (29%), Positives = 49/93 (52%)
Frame = +3
Query: 180 VHEIFQGTLTSETRCLNCETVSSKDEHFFDLQVDVGQNTSITHCLKCFSDTETLCNDNKF 359
+ ++F+G + C+N + S++ E F+DLQ+DV + + + + E L DNK+
Sbjct: 296 IEQLFEGHHINYIECINVDYKSNRKESFYDLQLDVKGCSDVYASFDKYVEVERLEGDNKY 355
Query: 360 KCDNCSSYXEAQKRMRVKKLPLILALHLKRFKY 458
+ +A+K + P +L L LKRF+Y
Sbjct: 356 HAEQ-YGLQDAKKGVLFLDFPPVLQLQLKRFEY 387
>04_04_1365 - 32967604-32968367,32969097-32969221,32969583-32969632
Length = 312
Score = 52.4 bits (120), Expect = 2e-07
Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 28/120 (23%)
Frame = +3
Query: 183 HEIFQGTLTSETRCLNCETVSSKDEHFFDLQVDV-------------------------G 287
H +F G L S+ C +C S+ E D+ +D+ G
Sbjct: 67 HRVFSGILRSDVTCTHCGFTSTTFEPCMDISLDLDAGYNNSLGVANPKVHVRNGERSSGG 126
Query: 288 QNTSIT---HCLKCFSDTETLCNDNKFKCDNCSSYXEAQKRMRVKKLPLILALHLKRFKY 458
NT ++ CL+ F+ E L + KF C+ C E+ K+M +++LPL+ H+KRF++
Sbjct: 127 TNTKVSTLMRCLERFTRAERLDAEQKFFCERCKERQESLKQMSIRRLPLVSCFHIKRFEH 186
>01_06_0864 -
32546696-32546803,32546881-32546961,32547134-32547250,
32548264-32548338,32548618-32548680,32549122-32549187,
32549254-32549325,32549403-32549504,32549588-32549765,
32549871-32549926,32551578-32551688,32551797-32551865,
32551960-32552068,32552176-32552327,32552398-32552475,
32554257-32554379,32555527-32555646,32555729-32555809,
32555881-32556027,32556112-32556190,32557223-32557297,
32558004-32558113,32558984-32559082,32559700-32559815,
32559914-32560022,32560098-32560229,32560389-32560591,
32561428-32561585,32561668-32561797,32562529-32562607,
32562806-32562829
Length = 1073
Score = 50.8 bits (116), Expect = 5e-07
Identities = 26/93 (27%), Positives = 49/93 (52%)
Frame = +3
Query: 180 VHEIFQGTLTSETRCLNCETVSSKDEHFFDLQVDVGQNTSITHCLKCFSDTETLCNDNKF 359
+ ++F+G + C+N + S++ E F+DL +DV + + + + E L DNK+
Sbjct: 250 IQQLFEGHHMNYIECINVDYKSTRKESFYDLALDVKGCSDVYASFDKYVEVERLEGDNKY 309
Query: 360 KCDNCSSYXEAQKRMRVKKLPLILALHLKRFKY 458
+ + +A+K M P +L + LKRF+Y
Sbjct: 310 QSEK-HGLQDAKKGMLFIDFPPVLQVQLKRFEY 341
>12_02_1151 +
26488686-26488792,26488897-26489142,26490246-26490381,
26490502-26490561,26490648-26490740,26491421-26491663,
26491828-26491968,26492312-26492482,26492813-26492899,
26492954-26493211,26493300-26493445,26493535-26493922,
26493935-26494092,26494267-26494540,26494721-26494894
Length = 893
Score = 46.8 bits (106), Expect = 9e-06
Identities = 20/57 (35%), Positives = 33/57 (57%)
Frame = +3
Query: 288 QNTSITHCLKCFSDTETLCNDNKFKCDNCSSYXEAQKRMRVKKLPLILALHLKRFKY 458
+ S+ CL+ F E L ++ + C C + +A K++ + +LP IL +HLKRF Y
Sbjct: 722 ETCSLYACLEAFIKEEPLGPEDMWYCPGCKEHRQASKKLDLWRLPEILIIHLKRFSY 778
>10_01_0345 -
3811057-3811236,3811342-3811615,3811732-3812289,
3812602-3812747,3812930-3813097,3813896-3814003,
3814859-3815029,3816557-3816949,3817522-3817617,
3817715-3817774,3818600-3818744,3819296-3819520,
3820106-3820254
Length = 890
Score = 46.8 bits (106), Expect = 9e-06
Identities = 20/50 (40%), Positives = 30/50 (60%)
Frame = +3
Query: 309 CLKCFSDTETLCNDNKFKCDNCSSYXEAQKRMRVKKLPLILALHLKRFKY 458
CL F E L D+ + C C+ + +A K++ + +LP IL +HLKRF Y
Sbjct: 724 CLDAFLKDEPLGPDDMWYCPRCTEHKQASKKLDLWRLPEILVVHLKRFSY 773
>11_04_0281 +
15733505-15733647,15734366-15734443,15734835-15735077,
15735868-15736012,15736234-15736293,15736376-15736471,
15736651-15737067,15737824-15737964,15738043-15738213,
15738394-15738651,15738741-15738889,15739060-15739557,
15740147-15740420,15740631-15740696,15740891-15741057,
15741413-15741497,15741673-15741732
Length = 1016
Score = 45.6 bits (103), Expect = 2e-05
Identities = 19/58 (32%), Positives = 32/58 (55%)
Frame = +3
Query: 285 GQNTSITHCLKCFSDTETLCNDNKFKCDNCSSYXEAQKRMRVKKLPLILALHLKRFKY 458
G+ S+ CL F E L ++ + C C +A K++ + +LP +L +HLKRF +
Sbjct: 776 GEPLSLYSCLDAFLREEPLVPEDMWYCPRCKEQRQASKKLDLWRLPEVLVIHLKRFSF 833
>07_01_0426 +
3239274-3239386,3239472-3239702,3242516-3242642,
3242729-3242788,3242868-3242960,3243073-3243369,
3243450-3243761,3243857-3244114,3244227-3244375,
3244470-3245102,3245367-3245640,3245736-3245777,
3246332-3246586,3246700-3246711
Length = 951
Score = 44.8 bits (101), Expect = 4e-05
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +3
Query: 309 CLKCFSDTETLCNDNKFKCDNCSSYXEAQKRMRVKKLPLILALHLKRFKYME 464
CL+ F E L ++ + C C + +A K++ + +LP +L +HLKRF Y +
Sbjct: 742 CLEAFLKEEPLGPEDMWYCPCCKKHQQAMKKLDLWRLPEVLVIHLKRFSYTQ 793
>09_02_0557 + 10639845-10639900,10640372-10640647,10640998-10641283
Length = 205
Score = 36.7 bits (81), Expect = 0.010
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 363 CDNCSSYXEAQKRMRVKKLPLILALHLKRFKYME 464
C C + +A K++ + +LP +L +HLKRF Y +
Sbjct: 113 CPCCKKHQQAMKKLDLWRLPEVLVIHLKRFSYTQ 146
>07_01_0454 +
3443871-3444024,3444268-3444356,3445482-3445557,
3445875-3445880,3445984-3446131,3446237-3446394,
3446473-3446676,3446803-3447038,3447227-3447439,
3447984-3448082,3448262-3448371,3448581-3448655,
3449407-3449485,3449563-3449709,3449785-3449865,
3449975-3450094,3450580-3450702,3451382-3451459,
3451586-3451674,3451760-3451868,3452117-3452227,
3452557-3452612,3452697-3452874,3452971-3453072,
3453160-3453231,3453350-3453415,3453502-3453567,
3453676-3453759,3454638-3454754,3455753-3455827,
3455912-3455995,3456138-3456179
Length = 1148
Score = 32.7 bits (71), Expect = 0.16
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = +3
Query: 267 DLQVDVGQNTSITHCLKCFSDTETLCNDNKFKCDNCSSYXEAQKRMRVKKLPLILALHLK 446
DLQ+DV + + + E L DNK+ + +A+K + P +L L LK
Sbjct: 390 DLQLDVKGCQDVYASFDKYVEVERLEGDNKYHAEQYG-LQDAKKGVLFIDFPPVLQLQLK 448
Query: 447 RFKY 458
RF+Y
Sbjct: 449 RFEY 452
>06_02_0244 - 13445023-13445400,13445495-13446823
Length = 568
Score = 29.9 bits (64), Expect = 1.1
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +3
Query: 210 SETRCLNCETVSSKDEHFFDLQVDVGQNTSITHCLKCFSDTETLCNDNKFKCD 368
++ R +N ET S K F QVD +N E L D+K +CD
Sbjct: 114 ADLRLINIETTSGKK---FQFQVDQSRNVKYLKSKLAVEGDEDLGEDHKLECD 163
>03_05_0383 +
23656041-23656096,23657189-23657255,23657599-23657745,
23658094-23658178,23658380-23658551,23660056-23660176,
23660431-23660550,23660861-23661073,23661154-23661213,
23661306-23661424,23661609-23661667,23661798-23662132
Length = 517
Score = 29.9 bits (64), Expect = 1.1
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +3
Query: 144 NGSVPHNTEPTWVHEIFQGTLTSET-RCLNCETVSSKDEHFFDLQVDVGQNTSITHCLKC 320
+G + + P W+ + T T RC +CE + KD + L D G+ CL+C
Sbjct: 222 DGHIEYRAHPFWMQKYCPAHETDRTPRCCSCERMEPKDSKYITL--DDGRKL----CLEC 275
Query: 321 FS 326
+
Sbjct: 276 LN 277
>08_02_1337 - 26238506-26238737,26239728-26240703,26241266-26242802
Length = 914
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +3
Query: 156 PHNTEPTWVHEIFQGTLTSETRCLNCETVSSKDEHFFDLQV 278
P + PT + IF L+ T C C S + F+DL V
Sbjct: 415 PSSVAPTVIDSIFGSELSVTTSCKRCSFKSYSCDVFYDLSV 455
>08_02_1331 +
26195949-26196132,26196606-26196710,26197270-26198127,
26198669-26199458,26200240-26200329,26200636-26200712,
26200797-26201383
Length = 896
Score = 29.5 bits (63), Expect = 1.4
Identities = 27/95 (28%), Positives = 38/95 (40%)
Frame = +3
Query: 186 EIFQGTLTSETRCLNCETVSSKDEHFFDLQVDVGQNTSITHCLKCFSDTETLCNDNKFKC 365
E++ T E C NC V K + D K E N+ K K
Sbjct: 234 ELYLETEEREWACENCSKVVEKPGIMSSTKEDTTAGDQSEQSEKSAYQVEENQNEQKDK- 292
Query: 366 DNCSSYXEAQKRMRVKKLPLILALHLKRFKYMEQF 470
+ C Q R+ ++KLP +L +HL R Y+E F
Sbjct: 293 NECP----IQTRL-IRKLPPVLTIHLMR--YLEDF 320
Score = 28.3 bits (60), Expect = 3.3
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 264 FDLQVDVGQNTSITHCLKCFSDTETLCNDNKFKCDNCSSYXE 389
+D D+ SI CL+ + +TE + ++ C+NCS E
Sbjct: 217 YDKAHDINSLASIEKCLELYLETE----EREWACENCSKVVE 254
>07_03_1573 +
27829967-27830338,27830821-27831510,27831594-27831781,
27832286-27832318,27832364-27832605,27833178-27833320,
27833649-27833825,27834104-27834256,27834639-27834694,
27834998-27835157,27835301-27835348
Length = 753
Score = 28.7 bits (61), Expect = 2.5
Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Frame = +3
Query: 171 PTWVHEIFQGTLTSETRCL-NCETVSSKDEHFFDLQVDVGQNTSITHCLKCFSDTETLCN 347
P+ + IF G L S + N +V+ + L + + L+ F+ E+L
Sbjct: 490 PSELTAIFGGQLQSCVKATGNKASVTVQPFRLIHLDIFPDAVQKLDDALRLFAAPESL-- 547
Query: 348 DNKFKCDNCSSYXEAQKRMRVKKLPLILALHLKRFKY 458
+ + A+K +++ L I+ LHLKRF Y
Sbjct: 548 EGYRTAAGKAGLVTARKSVKIHSLSKIMILHLKRFSY 584
>07_01_0021 -
133549-133628,133780-133824,133850-133858,134513-134656,
140098-140391,141324-141908,142034-142198,142364-142406
Length = 454
Score = 27.1 bits (57), Expect = 7.7
Identities = 14/55 (25%), Positives = 24/55 (43%)
Frame = -1
Query: 165 CCEALNHYTSHSHRSCSFELLMCFDYVPLSERGFQLATGKINVHLNNCKLTYLRF 1
CC+A++ Y SH + L D Q +NV+ ++C++T F
Sbjct: 306 CCKAMDSYVSHLQKQSFITNLQALDCAQFLGDKLQKMNVSMNVY-SSCQITLKDF 359
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,739,767
Number of Sequences: 37544
Number of extensions: 195192
Number of successful extensions: 708
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 701
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 967140324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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