Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte21h22
(474 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29095-12|CAB54287.2| 414|Caenorhabditis elegans Hypothetical p... 167 5e-42
Z29095-11|CAB54286.2| 426|Caenorhabditis elegans Hypothetical p... 167 5e-42
AL132902-8|CAC14423.2| 699|Caenorhabditis elegans Hypothetical ... 67 5e-12
Z47812-1|CAA87795.2| 1326|Caenorhabditis elegans Hypothetical pr... 62 1e-10
Z92835-4|CAE54910.1| 1135|Caenorhabditis elegans Hypothetical pr... 55 2e-08
Z92835-3|CAB07397.1| 1130|Caenorhabditis elegans Hypothetical pr... 55 2e-08
Z92835-2|CAB07396.1| 1133|Caenorhabditis elegans Hypothetical pr... 55 2e-08
U50193-6|AAL32262.1| 1175|Caenorhabditis elegans Cytokinesis def... 49 1e-06
U50193-5|AAL32263.1| 1178|Caenorhabditis elegans Cytokinesis def... 49 1e-06
AF469173-1|AAL79016.1| 1175|Caenorhabditis elegans ubiquitin c-t... 49 1e-06
Z79601-1|CAB01885.2| 716|Caenorhabditis elegans Hypothetical pr... 48 3e-06
Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical pr... 48 5e-06
AL132898-1|CAC14405.1| 357|Caenorhabditis elegans Hypothetical ... 46 1e-05
AF100662-1|AAC68977.1| 900|Caenorhabditis elegans Hypothetical ... 45 3e-05
Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical p... 40 0.001
Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical p... 40 0.001
Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical pr... 37 0.009
Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical pr... 37 0.009
Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical pr... 37 0.009
Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical pr... 37 0.009
Z70265-2|CAA94200.1| 388|Caenorhabditis elegans Hypothetical pr... 34 0.060
U64844-4|AAB18307.1| 376|Caenorhabditis elegans Hypothetical pr... 29 1.3
U64844-5|AAM45362.1| 368|Caenorhabditis elegans Hypothetical pr... 28 3.0
AF038614-1|AAB92058.2| 1228|Caenorhabditis elegans Hypothetical ... 27 5.2
U40060-4|AAY86193.1| 406|Caenorhabditis elegans Hypothetical pr... 27 6.9
AF098995-7|AAC67481.1| 253|Caenorhabditis elegans F-box b prote... 27 9.1
>Z29095-12|CAB54287.2| 414|Caenorhabditis elegans Hypothetical
protein R10E11.3b protein.
Length = 414
Score = 167 bits (405), Expect = 5e-42
Identities = 75/120 (62%), Positives = 91/120 (75%)
Frame = +3
Query: 114 KNNSGENVTCNGSVPHNTEPTWVHEIFQGTLTSETRCLNCETVSSKDEHFFDLQVDVGQN 293
+ N G V N + + TW+HEIFQG LT+ETRCL+CETVSSKDE F DL +DV QN
Sbjct: 163 ERNGGITVEGNEFLNKSDTTTWIHEIFQGILTNETRCLSCETVSSKDEDFLDLSIDVEQN 222
Query: 294 TSITHCLKCFSDTETLCNDNKFKCDNCSSYXEAQKRMRVKKLPLILALHLKRFKYMEQFN 473
TSI+HCL+ FS+TETLC D K+ C+ CSS EAQKRMR+KK P +LALHLKRFK++E N
Sbjct: 223 TSISHCLRVFSETETLCGDQKYFCETCSSKQEAQKRMRIKKPPQLLALHLKRFKFVEPLN 282
>Z29095-11|CAB54286.2| 426|Caenorhabditis elegans Hypothetical
protein R10E11.3a protein.
Length = 426
Score = 167 bits (405), Expect = 5e-42
Identities = 75/120 (62%), Positives = 91/120 (75%)
Frame = +3
Query: 114 KNNSGENVTCNGSVPHNTEPTWVHEIFQGTLTSETRCLNCETVSSKDEHFFDLQVDVGQN 293
+ N G V N + + TW+HEIFQG LT+ETRCL+CETVSSKDE F DL +DV QN
Sbjct: 175 ERNGGITVEGNEFLNKSDTTTWIHEIFQGILTNETRCLSCETVSSKDEDFLDLSIDVEQN 234
Query: 294 TSITHCLKCFSDTETLCNDNKFKCDNCSSYXEAQKRMRVKKLPLILALHLKRFKYMEQFN 473
TSI+HCL+ FS+TETLC D K+ C+ CSS EAQKRMR+KK P +LALHLKRFK++E N
Sbjct: 235 TSISHCLRVFSETETLCGDQKYFCETCSSKQEAQKRMRIKKPPQLLALHLKRFKFVEPLN 294
>AL132902-8|CAC14423.2| 699|Caenorhabditis elegans Hypothetical
protein Y71A12B.9 protein.
Length = 699
Score = 67.3 bits (157), Expect = 5e-12
Identities = 35/99 (35%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Frame = +3
Query: 174 TWVHEIFQGTLTSETRCLNCETVSSKDEHFFDLQVDVG--QNTS---ITHCLKCFSDTET 338
T + + F+GTL S C C S+K + F DL +D+ +N S ++ CL F E
Sbjct: 505 TPISKYFEGTLQSSVICQTCRNCSNKIDEFMDLSLDIPAQRNASKVRLSDCLSTFFKLEM 564
Query: 339 LCNDNKFKCDNCSSYXEAQKRMRVKKLPLILALHLKRFK 455
L K +C C + K+M ++KLP +L LH+KRF+
Sbjct: 565 LEKGEKPECAKCKTKQTCSKQMFIRKLPQVLCLHMKRFR 603
>Z47812-1|CAA87795.2| 1326|Caenorhabditis elegans Hypothetical
protein T05H10.1 protein.
Length = 1326
Score = 62.5 bits (145), Expect = 1e-10
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Frame = +3
Query: 180 VHEIFQGTLTSETRCLNCETVSSKDEHFFDLQVDVGQ------NTSITHCLKCFSDTETL 341
+ ++++GT+ CL C S K ++F DL + V S+ L F E L
Sbjct: 204 IQDLYRGTMEDFVACLKCGRESVKTDYFLDLPLAVKPFGAIHAYKSVEEALTAFVQPELL 263
Query: 342 CNDNKFKCDNCSSYXEAQKRMRVKKLPLILALHLKRFKY 458
N++ C+NC S +A K +R+ + P +L + LKRF +
Sbjct: 264 DGSNQYMCENCKSKQDAHKGLRITQFPYLLTIQLKRFDF 302
>Z92835-4|CAE54910.1| 1135|Caenorhabditis elegans Hypothetical
protein H19N07.2c protein.
Length = 1135
Score = 55.2 bits (127), Expect = 2e-08
Identities = 28/98 (28%), Positives = 56/98 (57%)
Frame = +3
Query: 165 TEPTWVHEIFQGTLTSETRCLNCETVSSKDEHFFDLQVDVGQNTSITHCLKCFSDTETLC 344
+E + +F+G + S +CL+ + SS+ E F+D+Q++V S+ + ++ +E L
Sbjct: 294 SEEKSIPNLFRGNMKSYIKCLDVDYESSRTESFYDVQLNVLGMDSLERAFEAYTTSEILD 353
Query: 345 NDNKFKCDNCSSYXEAQKRMRVKKLPLILALHLKRFKY 458
++NK+ + A+K ++ +LP IL + L RF+Y
Sbjct: 354 DENKYDAGD-HGLQRAEKGVKFVELPPILHVQLMRFQY 390
>Z92835-3|CAB07397.1| 1130|Caenorhabditis elegans Hypothetical
protein H19N07.2b protein.
Length = 1130
Score = 55.2 bits (127), Expect = 2e-08
Identities = 28/98 (28%), Positives = 56/98 (57%)
Frame = +3
Query: 165 TEPTWVHEIFQGTLTSETRCLNCETVSSKDEHFFDLQVDVGQNTSITHCLKCFSDTETLC 344
+E + +F+G + S +CL+ + SS+ E F+D+Q++V S+ + ++ +E L
Sbjct: 294 SEEKSIPNLFRGNMKSYIKCLDVDYESSRTESFYDVQLNVLGMDSLERAFEAYTTSEILD 353
Query: 345 NDNKFKCDNCSSYXEAQKRMRVKKLPLILALHLKRFKY 458
++NK+ + A+K ++ +LP IL + L RF+Y
Sbjct: 354 DENKYDAGD-HGLQRAEKGVKFVELPPILHVQLMRFQY 390
>Z92835-2|CAB07396.1| 1133|Caenorhabditis elegans Hypothetical
protein H19N07.2a protein.
Length = 1133
Score = 55.2 bits (127), Expect = 2e-08
Identities = 28/98 (28%), Positives = 56/98 (57%)
Frame = +3
Query: 165 TEPTWVHEIFQGTLTSETRCLNCETVSSKDEHFFDLQVDVGQNTSITHCLKCFSDTETLC 344
+E + +F+G + S +CL+ + SS+ E F+D+Q++V S+ + ++ +E L
Sbjct: 294 SEEKSIPNLFRGNMKSYIKCLDVDYESSRTESFYDVQLNVLGMDSLERAFEAYTTSEILD 353
Query: 345 NDNKFKCDNCSSYXEAQKRMRVKKLPLILALHLKRFKY 458
++NK+ + A+K ++ +LP IL + L RF+Y
Sbjct: 354 DENKYDAGD-HGLQRAEKGVKFVELPPILHVQLMRFQY 390
>U50193-6|AAL32262.1| 1175|Caenorhabditis elegans Cytokinesis defect
protein 3, isoforma protein.
Length = 1175
Score = 49.2 bits (112), Expect = 1e-06
Identities = 23/58 (39%), Positives = 34/58 (58%)
Frame = +3
Query: 294 TSITHCLKCFSDTETLCNDNKFKCDNCSSYXEAQKRMRVKKLPLILALHLKRFKYMEQ 467
+S+ HC++ FS ETL D +CD C K M + KLP L +HLKRF+++ +
Sbjct: 1028 SSLEHCIEKFSCPETL--DAAIQCDRCEKKTMRDKVMTIWKLPKYLIIHLKRFEFLRE 1083
>U50193-5|AAL32263.1| 1178|Caenorhabditis elegans Cytokinesis defect
protein 3, isoformb protein.
Length = 1178
Score = 49.2 bits (112), Expect = 1e-06
Identities = 23/58 (39%), Positives = 34/58 (58%)
Frame = +3
Query: 294 TSITHCLKCFSDTETLCNDNKFKCDNCSSYXEAQKRMRVKKLPLILALHLKRFKYMEQ 467
+S+ HC++ FS ETL D +CD C K M + KLP L +HLKRF+++ +
Sbjct: 1031 SSLEHCIEKFSCPETL--DAAIQCDRCEKKTMRDKVMTIWKLPKYLIIHLKRFEFLRE 1086
>AF469173-1|AAL79016.1| 1175|Caenorhabditis elegans ubiquitin
c-terminal hydrolase protein.
Length = 1175
Score = 49.2 bits (112), Expect = 1e-06
Identities = 23/58 (39%), Positives = 34/58 (58%)
Frame = +3
Query: 294 TSITHCLKCFSDTETLCNDNKFKCDNCSSYXEAQKRMRVKKLPLILALHLKRFKYMEQ 467
+S+ HC++ FS ETL D +CD C K M + KLP L +HLKRF+++ +
Sbjct: 1028 SSLEHCIEKFSCPETL--DAAIQCDRCEKKTMRDKVMTIWKLPKYLIIHLKRFEFLRE 1083
>Z79601-1|CAB01885.2| 716|Caenorhabditis elegans Hypothetical
protein K09A9.4 protein.
Length = 716
Score = 48.4 bits (110), Expect = 3e-06
Identities = 24/84 (28%), Positives = 39/84 (46%)
Frame = +3
Query: 207 TSETRCLNCETVSSKDEHFFDLQVDVGQNTSITHCLKCFSDTETLCNDNKFKCDNCSSYX 386
T + C + +D F Q TS+ CL F TL +DN++ C C
Sbjct: 374 TPKAPCTSSNIEDGQDPGFLVHQ-GAFNKTSLESCLDRFFQNSTLQDDNQYSCSKCEVLV 432
Query: 387 EAQKRMRVKKLPLILALHLKRFKY 458
+A K + +LP ++ + LKRF++
Sbjct: 433 DATKSTKAHRLPEVIIIQLKRFRH 456
Score = 34.3 bits (75), Expect = 0.045
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +3
Query: 54 LLIETLFLTAERNQSTLKVQKNNSGENVTCNGSVPHNTEPTWVHEIFQGTLTSETRCLNC 233
+L L +E +++ ++ N + + PH T + IFQG L ++ +C +C
Sbjct: 283 ILDRDLKTCSEYHRTNTLIEMGNPEMDYAIAMNAPHTK--TAISAIFQGVLENQIQCHSC 340
Query: 234 ETVSSKDEHFFDLQVD-VGQN 293
S E+F DL + VG+N
Sbjct: 341 GFRSRTIENFLDLSIPIVGEN 361
>Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical protein
F07A11.4 protein.
Length = 1095
Score = 47.6 bits (108), Expect = 5e-06
Identities = 21/56 (37%), Positives = 32/56 (57%)
Frame = +3
Query: 291 NTSITHCLKCFSDTETLCNDNKFKCDNCSSYXEAQKRMRVKKLPLILALHLKRFKY 458
N +T L FS+TE L + + C C EA K++++ +LP +L + LKRF Y
Sbjct: 907 NPHLTQMLDLFSETERLKPEESWYCSTCKENVEATKKLQLYRLPPVLIIQLKRFVY 962
Score = 28.7 bits (61), Expect = 2.3
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 186 EIFQGTLTSETRCLNCETVSSKDEHFFDLQVDVGQNTSIT 305
++F G L S +C NC+ VS + F L V +N T
Sbjct: 570 DLFHGQLKSHVQCPNCDRVSITFDPFVYLPVPFPKNKQST 609
>AL132898-1|CAC14405.1| 357|Caenorhabditis elegans Hypothetical
protein Y59A8B.2 protein.
Length = 357
Score = 46.4 bits (105), Expect = 1e-05
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Frame = +3
Query: 198 GTLT-SETRCLNCETVSSKDEHFFDLQVDVGQNTS--ITHCLKCFSDTETLCNDNKFKCD 368
G++T SE RCL C S+ E + V++ N+S + CL+ L D+++ C
Sbjct: 174 GSITVSEIRCLTCGASSATFEENTIISVEIPSNSSCSLDMCLRSHFSQTKLDGDSRWNCP 233
Query: 369 NCSSYXEAQKRMRVKKLPLILALHLKRF 452
C + + ++ + P ++ +HLKRF
Sbjct: 234 KCKEPRASTRTSKLWQPPPVMIIHLKRF 261
>AF100662-1|AAC68977.1| 900|Caenorhabditis elegans Hypothetical
protein H34C03.2 protein.
Length = 900
Score = 44.8 bits (101), Expect = 3e-05
Identities = 21/64 (32%), Positives = 33/64 (51%)
Frame = +3
Query: 267 DLQVDVGQNTSITHCLKCFSDTETLCNDNKFKCDNCSSYXEAQKRMRVKKLPLILALHLK 446
++ V + + L F+ E L + + C C + A K++ + KLP IL LHLK
Sbjct: 689 EMTVSTRRKVLLQETLDWFTTKEQLGEQDSWYCPQCKKHERATKQLALWKLPEILILHLK 748
Query: 447 RFKY 458
RF+Y
Sbjct: 749 RFQY 752
>Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical
protein F30A10.10 protein.
Length = 1262
Score = 39.5 bits (88), Expect = 0.001
Identities = 22/91 (24%), Positives = 41/91 (45%)
Frame = +3
Query: 186 EIFQGTLTSETRCLNCETVSSKDEHFFDLQVDVGQNTSITHCLKCFSDTETLCNDNKFKC 365
++F G + C C S ++E L +++ ++ L + E L + FKC
Sbjct: 226 DLFTGETCTRIVC-KCGQRSEREETAISLTLNIEGYCTLLDALDAYFGEEHL---DDFKC 281
Query: 366 DNCSSYXEAQKRMRVKKLPLILALHLKRFKY 458
C+ + K+ KLP ++ + L R+KY
Sbjct: 282 SKCNKTGDVSKQSDYVKLPPVIVIQLNRYKY 312
>Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical
protein F30A10.10 protein.
Length = 1262
Score = 39.5 bits (88), Expect = 0.001
Identities = 22/91 (24%), Positives = 41/91 (45%)
Frame = +3
Query: 186 EIFQGTLTSETRCLNCETVSSKDEHFFDLQVDVGQNTSITHCLKCFSDTETLCNDNKFKC 365
++F G + C C S ++E L +++ ++ L + E L + FKC
Sbjct: 226 DLFTGETCTRIVC-KCGQRSEREETAISLTLNIEGYCTLLDALDAYFGEEHL---DDFKC 281
Query: 366 DNCSSYXEAQKRMRVKKLPLILALHLKRFKY 458
C+ + K+ KLP ++ + L R+KY
Sbjct: 282 SKCNKTGDVSKQSDYVKLPPVIVIQLNRYKY 312
>Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical protein
T24B8.7b protein.
Length = 2923
Score = 36.7 bits (81), Expect = 0.009
Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 1/90 (1%)
Frame = +3
Query: 192 FQGTLTSETRCLNC-ETVSSKDEHFFDLQVDVGQNTSITHCLKCFSDTETLCNDNKFKCD 368
F G + E C C S DE F + + + + ++ L+ F + +N + C+
Sbjct: 1886 FFGKYSYEKICYGCWHRYKSPDEEFNCISLALSGD-NLEEALENFLAAHVMEGENAYHCE 1944
Query: 369 NCSSYXEAQKRMRVKKLPLILALHLKRFKY 458
C R +LP + + LKRF Y
Sbjct: 1945 KCDEKKTTLNRTSFLELPSTMTIQLKRFTY 1974
>Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical protein
T24B8.7a protein.
Length = 2920
Score = 36.7 bits (81), Expect = 0.009
Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 1/90 (1%)
Frame = +3
Query: 192 FQGTLTSETRCLNC-ETVSSKDEHFFDLQVDVGQNTSITHCLKCFSDTETLCNDNKFKCD 368
F G + E C C S DE F + + + + ++ L+ F + +N + C+
Sbjct: 1883 FFGKYSYEKICYGCWHRYKSPDEEFNCISLALSGD-NLEEALENFLAAHVMEGENAYHCE 1941
Query: 369 NCSSYXEAQKRMRVKKLPLILALHLKRFKY 458
C R +LP + + LKRF Y
Sbjct: 1942 KCDEKKTTLNRTSFLELPSTMTIQLKRFTY 1971
>Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical protein
T24B8.7b protein.
Length = 2923
Score = 36.7 bits (81), Expect = 0.009
Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 1/90 (1%)
Frame = +3
Query: 192 FQGTLTSETRCLNC-ETVSSKDEHFFDLQVDVGQNTSITHCLKCFSDTETLCNDNKFKCD 368
F G + E C C S DE F + + + + ++ L+ F + +N + C+
Sbjct: 1886 FFGKYSYEKICYGCWHRYKSPDEEFNCISLALSGD-NLEEALENFLAAHVMEGENAYHCE 1944
Query: 369 NCSSYXEAQKRMRVKKLPLILALHLKRFKY 458
C R +LP + + LKRF Y
Sbjct: 1945 KCDEKKTTLNRTSFLELPSTMTIQLKRFTY 1974
>Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical protein
T24B8.7a protein.
Length = 2920
Score = 36.7 bits (81), Expect = 0.009
Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 1/90 (1%)
Frame = +3
Query: 192 FQGTLTSETRCLNC-ETVSSKDEHFFDLQVDVGQNTSITHCLKCFSDTETLCNDNKFKCD 368
F G + E C C S DE F + + + + ++ L+ F + +N + C+
Sbjct: 1883 FFGKYSYEKICYGCWHRYKSPDEEFNCISLALSGD-NLEEALENFLAAHVMEGENAYHCE 1941
Query: 369 NCSSYXEAQKRMRVKKLPLILALHLKRFKY 458
C R +LP + + LKRF Y
Sbjct: 1942 KCDEKKTTLNRTSFLELPSTMTIQLKRFTY 1971
>Z70265-2|CAA94200.1| 388|Caenorhabditis elegans Hypothetical
protein C05A9.3 protein.
Length = 388
Score = 33.9 bits (74), Expect = 0.060
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = +3
Query: 90 NQSTLKVQKNNSGENVTCNGSVPHNTEPTWVHEIFQGTLTSETRCLNCETVSSK 251
N ST +K SG N G + N P V ++ T T C+NC+T S+K
Sbjct: 14 NFSTTSFRKKLSGLNANITGFIDGNNRPVPVW-VYDRIGTYRTICINCQTSSTK 66
>U64844-4|AAB18307.1| 376|Caenorhabditis elegans Hypothetical
protein T22F3.2a protein.
Length = 376
Score = 29.5 bits (63), Expect = 1.3
Identities = 20/96 (20%), Positives = 44/96 (45%), Gaps = 5/96 (5%)
Frame = +3
Query: 186 EIFQGTLTSETRCLNCETVSSKDEHFFDLQVDVGQN--TSITHCLKCFSDTETLCNDNK- 356
++F ++ +E +C C+ EH + V + + + +H +K + L ++K
Sbjct: 180 DLFGYSIRNEVQCPGCKNKHVYYEHNTVMTVRMLRKDPSGKSHSIKELM--QALFTESKI 237
Query: 357 --FKCDNCSSYXEAQKRMRVKKLPLILALHLKRFKY 458
+ C C +A + + + P IL +H+ RF +
Sbjct: 238 FGYNCSKCKKKSDAPVKPTLLRAPQILLMHISRFSF 273
>U64844-5|AAM45362.1| 368|Caenorhabditis elegans Hypothetical
protein T22F3.2b protein.
Length = 368
Score = 28.3 bits (60), Expect = 3.0
Identities = 20/94 (21%), Positives = 43/94 (45%), Gaps = 5/94 (5%)
Frame = +3
Query: 186 EIFQGTLTSETRCLNCETVSSKDEHFFDLQVDVGQN--TSITHCLKCFSDTETLCNDNK- 356
++F ++ +E +C C+ EH + V + + + +H +K + L ++K
Sbjct: 180 DLFGYSIRNEVQCPGCKNKHVYYEHNTVMTVRMLRKDPSGKSHSIKELM--QALFTESKI 237
Query: 357 --FKCDNCSSYXEAQKRMRVKKLPLILALHLKRF 452
+ C C +A + + + P IL +H+ RF
Sbjct: 238 FGYNCSKCKKKSDAPVKPTLLRAPQILLMHISRF 271
>AF038614-1|AAB92058.2| 1228|Caenorhabditis elegans Hypothetical
protein F15E6.6 protein.
Length = 1228
Score = 27.5 bits (58), Expect = 5.2
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +3
Query: 174 TWVHEIFQGTLTSETRCLNCETVSSKDEHFFDLQVDVGQNTS 299
T V+ +F ++T + CL S +D F+ VG N S
Sbjct: 392 TIVNTVFSSSITGQLFCLKLGETSEQDSTSFNFAALVGNNIS 433
>U40060-4|AAY86193.1| 406|Caenorhabditis elegans Hypothetical
protein F38B6.8 protein.
Length = 406
Score = 27.1 bits (57), Expect = 6.9
Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +3
Query: 90 NQSTLKVQKNNSGENVTCNGSVPHNTEPTWVHEIFQGTLTSETRCLNCETVS-SKDEH 260
N T+ + + + + V N + H + +TSETR NC+ S DEH
Sbjct: 76 NDETVILHTSQTLFETPVHSHVDTNVLRVYYHNSWLQNITSETRATNCKVYKLSIDEH 133
>AF098995-7|AAC67481.1| 253|Caenorhabditis elegans F-box b protein
protein 25 protein.
Length = 253
Score = 26.6 bits (56), Expect = 9.1
Identities = 21/84 (25%), Positives = 36/84 (42%)
Frame = +3
Query: 57 LIETLFLTAERNQSTLKVQKNNSGENVTCNGSVPHNTEPTWVHEIFQGTLTSETRCLNCE 236
++E F QS Q++N+ N + S+P + W+ I + L E
Sbjct: 70 IVEFFFKMDPHYQSVEVRQRSNNRSNTSTELSIPGVSVKFWIEHIVHVFCKDQGALLKLE 129
Query: 237 TVSSKDEHFFDLQVDVGQNTSITH 308
+S E+F +L D+ N +I H
Sbjct: 130 --NSAGENFDEL-YDMIANITIVH 150
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,413,260
Number of Sequences: 27780
Number of extensions: 178985
Number of successful extensions: 671
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 662
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 860942358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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