Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21h21
         (562 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC046128-1|AAH46128.1|  261|Homo sapiens TMEM34 protein protein.       30   4.8  
BC016582-1|AAH16582.1|  532|Homo sapiens polypyrimidine tract bi...    30   4.8  
AL357150-5|CAH70269.1|  531|Homo sapiens polypyrimidine tract bi...    30   4.8  
AL357150-4|CAH70267.1|  537|Homo sapiens polypyrimidine tract bi...    30   4.8  
AL357150-3|CAH70266.1|  536|Homo sapiens polypyrimidine tract bi...    30   4.8  
AL357150-2|CAH70268.1|  532|Homo sapiens polypyrimidine tract bi...    30   4.8  
AK001708-1|BAA91851.1|  438|Homo sapiens protein ( Homo sapiens ...    30   4.8  
AF530581-1|AAM94625.1|  536|Homo sapiens non-neuronal splice var...    30   4.8  
AF530580-1|AAM94624.1|  537|Homo sapiens non-neuronal splice var...    30   4.8  
AF176085-1|AAF14284.1|  531|Homo sapiens neural polypyrimidine t...    30   4.8  
AB051232-1|BAB71742.1|  532|Homo sapiens PTB-like protein L prot...    30   4.8  

>BC046128-1|AAH46128.1|  261|Homo sapiens TMEM34 protein protein.
          Length = 261

 Score = 30.3 bits (65), Expect = 4.8
 Identities = 15/29 (51%), Positives = 18/29 (62%)
 Frame = +3

Query: 459 DFCPECHEKSVIYSFKNKAFLALYL*NRF 545
           D C EC+E  VIY+F    FL  YL NR+
Sbjct: 111 DTCRECYEAYVIYNF--MGFLTNYLTNRY 137


>BC016582-1|AAH16582.1|  532|Homo sapiens polypyrimidine tract
           binding protein 2 protein.
          Length = 532

 Score = 30.3 bits (65), Expect = 4.8
 Identities = 18/56 (32%), Positives = 30/56 (53%)
 Frame = +2

Query: 275 DIQRIKNMLNESRPVMLTLMDPNRTNLYPQHIYPLNGSLSEKYYKKTSKNIMSKSQ 442
           D+QR+K + N+    ++ + D N++ L   H   LNG   +K Y K  +  +SK Q
Sbjct: 364 DVQRVKILYNKKDSALIQMADGNQSQLAMNH---LNG---QKMYGKIIRVTLSKHQ 413


>AL357150-5|CAH70269.1|  531|Homo sapiens polypyrimidine tract
           binding protein 2 protein.
          Length = 531

 Score = 30.3 bits (65), Expect = 4.8
 Identities = 18/56 (32%), Positives = 30/56 (53%)
 Frame = +2

Query: 275 DIQRIKNMLNESRPVMLTLMDPNRTNLYPQHIYPLNGSLSEKYYKKTSKNIMSKSQ 442
           D+QR+K + N+    ++ + D N++ L   H   LNG   +K Y K  +  +SK Q
Sbjct: 364 DVQRVKILYNKKDSALIQMADGNQSQLAMNH---LNG---QKMYGKIIRVTLSKHQ 413


>AL357150-4|CAH70267.1|  537|Homo sapiens polypyrimidine tract
           binding protein 2 protein.
          Length = 537

 Score = 30.3 bits (65), Expect = 4.8
 Identities = 18/56 (32%), Positives = 30/56 (53%)
 Frame = +2

Query: 275 DIQRIKNMLNESRPVMLTLMDPNRTNLYPQHIYPLNGSLSEKYYKKTSKNIMSKSQ 442
           D+QR+K + N+    ++ + D N++ L   H   LNG   +K Y K  +  +SK Q
Sbjct: 369 DVQRVKILYNKKDSALIQMADGNQSQLAMNH---LNG---QKMYGKIIRVTLSKHQ 418


>AL357150-3|CAH70266.1|  536|Homo sapiens polypyrimidine tract
           binding protein 2 protein.
          Length = 536

 Score = 30.3 bits (65), Expect = 4.8
 Identities = 18/56 (32%), Positives = 30/56 (53%)
 Frame = +2

Query: 275 DIQRIKNMLNESRPVMLTLMDPNRTNLYPQHIYPLNGSLSEKYYKKTSKNIMSKSQ 442
           D+QR+K + N+    ++ + D N++ L   H   LNG   +K Y K  +  +SK Q
Sbjct: 369 DVQRVKILYNKKDSALIQMADGNQSQLAMNH---LNG---QKMYGKIIRVTLSKHQ 418


>AL357150-2|CAH70268.1|  532|Homo sapiens polypyrimidine tract
           binding protein 2 protein.
          Length = 532

 Score = 30.3 bits (65), Expect = 4.8
 Identities = 18/56 (32%), Positives = 30/56 (53%)
 Frame = +2

Query: 275 DIQRIKNMLNESRPVMLTLMDPNRTNLYPQHIYPLNGSLSEKYYKKTSKNIMSKSQ 442
           D+QR+K + N+    ++ + D N++ L   H   LNG   +K Y K  +  +SK Q
Sbjct: 364 DVQRVKILYNKKDSALIQMADGNQSQLAMNH---LNG---QKMYGKIIRVTLSKHQ 413


>AK001708-1|BAA91851.1|  438|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10846 fis, clone NT2RP4001373. ).
          Length = 438

 Score = 30.3 bits (65), Expect = 4.8
 Identities = 15/29 (51%), Positives = 18/29 (62%)
 Frame = +3

Query: 459 DFCPECHEKSVIYSFKNKAFLALYL*NRF 545
           D C EC+E  VIY+F    FL  YL NR+
Sbjct: 111 DTCRECYEAYVIYNF--MGFLTNYLTNRY 137


>AF530581-1|AAM94625.1|  536|Homo sapiens non-neuronal splice
           variant nPTB4 protein.
          Length = 536

 Score = 30.3 bits (65), Expect = 4.8
 Identities = 18/56 (32%), Positives = 30/56 (53%)
 Frame = +2

Query: 275 DIQRIKNMLNESRPVMLTLMDPNRTNLYPQHIYPLNGSLSEKYYKKTSKNIMSKSQ 442
           D+QR+K + N+    ++ + D N++ L   H   LNG   +K Y K  +  +SK Q
Sbjct: 369 DVQRVKILYNKKDSALIQMADGNQSQLAMNH---LNG---QKMYGKIIRVTLSKHQ 418


>AF530580-1|AAM94624.1|  537|Homo sapiens non-neuronal splice
           variant nPTB3 protein.
          Length = 537

 Score = 30.3 bits (65), Expect = 4.8
 Identities = 18/56 (32%), Positives = 30/56 (53%)
 Frame = +2

Query: 275 DIQRIKNMLNESRPVMLTLMDPNRTNLYPQHIYPLNGSLSEKYYKKTSKNIMSKSQ 442
           D+QR+K + N+    ++ + D N++ L   H   LNG   +K Y K  +  +SK Q
Sbjct: 369 DVQRVKILYNKKDSALIQMADGNQSQLAMNH---LNG---QKMYGKIIRVTLSKHQ 418


>AF176085-1|AAF14284.1|  531|Homo sapiens neural polypyrimidine
           tract binding protein protein.
          Length = 531

 Score = 30.3 bits (65), Expect = 4.8
 Identities = 18/56 (32%), Positives = 30/56 (53%)
 Frame = +2

Query: 275 DIQRIKNMLNESRPVMLTLMDPNRTNLYPQHIYPLNGSLSEKYYKKTSKNIMSKSQ 442
           D+QR+K + N+    ++ + D N++ L   H   LNG   +K Y K  +  +SK Q
Sbjct: 364 DVQRVKILYNKKDSALIQMADGNQSQLAMNH---LNG---QKMYGKIIRVTLSKHQ 413


>AB051232-1|BAB71742.1|  532|Homo sapiens PTB-like protein L
           protein.
          Length = 532

 Score = 30.3 bits (65), Expect = 4.8
 Identities = 18/56 (32%), Positives = 30/56 (53%)
 Frame = +2

Query: 275 DIQRIKNMLNESRPVMLTLMDPNRTNLYPQHIYPLNGSLSEKYYKKTSKNIMSKSQ 442
           D+QR+K + N+    ++ + D N++ L   H   LNG   +K Y K  +  +SK Q
Sbjct: 364 DVQRVKILYNKKDSALIQMADGNQSQLAMNH---LNG---QKMYGKIIRVTLSKHQ 413


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,081,092
Number of Sequences: 237096
Number of extensions: 1513816
Number of successful extensions: 7877
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 7589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7873
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5646880600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)