Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21g14
         (622 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    25   0.60 
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    25   0.60 
AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex det...    24   1.0  
AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    23   3.2  
AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex det...    23   3.2  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    23   3.2  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    23   3.2  

>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +1

Query: 433 NGISSVTFTVKKYYSLINIQI*SCPVAWETLCG 531
           N  ++  +  K YY++INI+    PV     CG
Sbjct: 101 NNYNNNNYNKKLYYNIINIEQIPVPVPVPVYCG 133


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +1

Query: 433 NGISSVTFTVKKYYSLINIQI*SCPVAWETLCG 531
           N  ++  +  K YY++INI+    PV     CG
Sbjct: 101 NNYNNNNYNKKLYYNIINIEQIPVPVPVPVYCG 133


>AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +1

Query: 433 NGISSVTFTVKKYYSLINIQI*SCPVAWETLCG 531
           N I +  +  K YY++INI+    PV     CG
Sbjct: 321 NTIHNNNYNKKLYYNIINIEQIPVPVPVPIHCG 353


>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 463 KKYYSLINIQI*SCPVAWETLCG 531
           K YY++INI+    PV     CG
Sbjct: 322 KLYYNIINIEQIPVPVPVPIYCG 344


>AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 463 KKYYSLINIQI*SCPVAWETLCG 531
           K YY++INI+    PV     CG
Sbjct: 333 KLYYNIINIEQIPVPVPVPIYCG 355


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 463 KKYYSLINIQI*SCPVAWETLCG 531
           K YY++INI+    PV     CG
Sbjct: 351 KLYYNIINIEQIPVPVPVPIYCG 373


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 463 KKYYSLINIQI*SCPVAWETLCG 531
           K YY++INI+    PV     CG
Sbjct: 353 KLYYNIINIEQIPVPVPVPIYCG 375


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,939
Number of Sequences: 438
Number of extensions: 3085
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18460203
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)