Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte21g11
(613 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal... 194 2e-49
BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal... 194 2e-49
AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA seq... 182 1e-45
AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein. 180 5e-45
AB051617-1|BAB54945.1| 56|Homo sapiens mitochondrial ribosomal... 47 5e-05
BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8 pr... 46 8e-05
BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8 pr... 46 8e-05
BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8 pr... 46 8e-05
Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8 prot... 46 1e-04
CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein. 46 1e-04
BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8 pr... 46 1e-04
BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8 pr... 46 1e-04
AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8 pr... 46 1e-04
BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein. 46 1e-04
AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8 pr... 40 0.009
BC035314-1|AAH35314.1| 306|Homo sapiens brix domain containing ... 33 0.79
AL357515-8|CAH73396.1| 208|Homo sapiens brix domain containing ... 33 0.79
AL357515-7|CAH73395.1| 214|Homo sapiens brix domain containing ... 33 0.79
AL357515-6|CAH73394.1| 306|Homo sapiens brix domain containing ... 33 0.79
AK024740-1|BAB14983.1| 253|Homo sapiens protein ( Homo sapiens ... 33 0.79
AB209096-1|BAD92333.1| 580|Homo sapiens G protein-coupled recep... 31 4.2
AK130499-1|BAC85365.1| 220|Homo sapiens protein ( Homo sapiens ... 30 7.4
AJ271869-1|CAB76561.1| 328|Homo sapiens 19A24 protein protein. 29 9.8
>BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 194 bits (474), Expect = 2e-49
Identities = 96/183 (52%), Positives = 123/183 (67%), Gaps = 2/183 (1%)
Frame = +2
Query: 71 KYHWIDWYRVGP--TEGPPQEEKVIQIIEDGCRTAHVALVAVGDKLKYILATENMKAGDI 244
+Y ID+ R P T+ P EEKVIQ+ D CR+A +ALVA G + ++I+ATENM+AGD
Sbjct: 103 RYRMIDFLRFRPEETKSGPFEEKVIQVRYDPCRSADIALVAGGSRKRWIIATENMQAGDT 162
Query: 245 IKTSCKLPRIPVRANEGDAYVLGALPIGTIVHCVEKEPGQGGLYIHAAGTSGTIVRKQDD 424
I S + R+ V A EGDA+ LGALP+GT+++ VE EPG+G YI AAGT G ++RK +
Sbjct: 163 ILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLLRKVNG 222
Query: 425 RVIVQMPSKRLFSFNQLCMAVVGRLSNVLHGSTPIGSPQRNRWLGNRPRSGLWQRKSGRH 604
I+Q+PSKR + C+A VGR+SNV H IG RNRWLG RP SG W RK G
Sbjct: 223 TAIIQLPSKRQMQVLETCVATVGRVSNVDHNKRVIGKAGRNRWLGKRPNSGRWHRKGGWA 282
Query: 605 GRK 613
GRK
Sbjct: 283 GRK 285
>BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 194 bits (474), Expect = 2e-49
Identities = 96/183 (52%), Positives = 123/183 (67%), Gaps = 2/183 (1%)
Frame = +2
Query: 71 KYHWIDWYRVGP--TEGPPQEEKVIQIIEDGCRTAHVALVAVGDKLKYILATENMKAGDI 244
+Y ID+ R P T+ P EEKVIQ+ D CR+A +ALVA G + ++I+ATENM+AGD
Sbjct: 103 RYRMIDFLRFRPEETKSGPFEEKVIQVRYDPCRSADIALVAGGSRKRWIIATENMQAGDT 162
Query: 245 IKTSCKLPRIPVRANEGDAYVLGALPIGTIVHCVEKEPGQGGLYIHAAGTSGTIVRKQDD 424
I S + R+ V A EGDA+ LGALP+GT+++ VE EPG+G YI AAGT G ++RK +
Sbjct: 163 ILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLLRKVNG 222
Query: 425 RVIVQMPSKRLFSFNQLCMAVVGRLSNVLHGSTPIGSPQRNRWLGNRPRSGLWQRKSGRH 604
I+Q+PSKR + C+A VGR+SNV H IG RNRWLG RP SG W RK G
Sbjct: 223 TAIIQLPSKRQMQVLETCVATVGRVSNVDHNKRVIGKAGRNRWLGKRPNSGRWHRKGGWA 282
Query: 605 GRK 613
GRK
Sbjct: 283 GRK 285
>AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA
sequence from clone RP11-387M24 on chromosome 6 Contains
the 5' end of a gene for a novel protein (KIAA0076
KIAA0708), the ).
Length = 302
Score = 182 bits (442), Expect = 1e-45
Identities = 93/183 (50%), Positives = 120/183 (65%), Gaps = 2/183 (1%)
Frame = +2
Query: 71 KYHWIDWYRVGP--TEGPPQEEKVIQIIEDGCRTAHVALVAVGDKLKYILATENMKAGDI 244
+Y ID+ R P T+ P EEKVIQ+ D + +ALVA G + ++I+ATENM+AGD
Sbjct: 103 RYRMIDFLRFRPEETKSGPFEEKVIQVRYD---PSDIALVAGGSRKRWIIATENMQAGDT 159
Query: 245 IKTSCKLPRIPVRANEGDAYVLGALPIGTIVHCVEKEPGQGGLYIHAAGTSGTIVRKQDD 424
I S + R+ V A EGDA+ LGALP+GT+++ VE EPG+G YI AAGT G ++RK +
Sbjct: 160 ILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLLRKVNG 219
Query: 425 RVIVQMPSKRLFSFNQLCMAVVGRLSNVLHGSTPIGSPQRNRWLGNRPRSGLWQRKSGRH 604
I+Q+PSKR + C+A VGR+SNV H IG RNRWLG RP SG W RK G
Sbjct: 220 TAIIQLPSKRQMQVLETCVATVGRVSNVDHNKRVIGKAGRNRWLGKRPNSGRWHRKGGWA 279
Query: 605 GRK 613
GRK
Sbjct: 280 GRK 282
>AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein.
Length = 353
Score = 180 bits (437), Expect = 5e-45
Identities = 89/171 (52%), Positives = 116/171 (67%), Gaps = 2/171 (1%)
Frame = +2
Query: 71 KYHWIDWYRVGP--TEGPPQEEKVIQIIEDGCRTAHVALVAVGDKLKYILATENMKAGDI 244
+Y ID+ R P T+ P EEKVIQ+ D CR+A +ALVA G + ++I+ATENM+AGD
Sbjct: 103 RYRMIDFLRFRPEETKSGPFEEKVIQVRYDPCRSADIALVAGGSRKRWIIATENMQAGDT 162
Query: 245 IKTSCKLPRIPVRANEGDAYVLGALPIGTIVHCVEKEPGQGGLYIHAAGTSGTIVRKQDD 424
I S + R+ V A EGDA+ LGALP+GT+++ VE EPG+G YI AAGT G ++RK +
Sbjct: 163 ILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLLRKVNG 222
Query: 425 RVIVQMPSKRLFSFNQLCMAVVGRLSNVLHGSTPIGSPQRNRWLGNRPRSG 577
I+Q+PSKR + C+A VGR+SNV H IG RNRWLG RP SG
Sbjct: 223 HSIIQLPSKRQMQVLETCVATVGRVSNVDHNKRVIGKAGRNRWLGKRPNSG 273
>AB051617-1|BAB54945.1| 56|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 56
Score = 47.2 bits (107), Expect = 5e-05
Identities = 20/34 (58%), Positives = 20/34 (58%)
Frame = +2
Query: 512 HGSTPIGSPQRNRWLGNRPRSGLWQRKSGRHGRK 613
H IG RNRWLG RP SG W RK G GRK
Sbjct: 3 HNKRVIGKAGRNRWLGKRPNSGRWHRKGGWAGRK 36
>BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 46.4 bits (105), Expect = 8e-05
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 3/123 (2%)
Frame = +2
Query: 134 VIQIIEDGCRTAHVALVAVGDKLKYILATENMKAGDIIKTSCKLP-RIPVRANEGDAYVL 310
V II D R A +A V D ++ TE A + I T + + N G+ +
Sbjct: 45 VKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLPV 104
Query: 311 GALPIGTIVHCVEKEPGQGGLYIHAAGTSGTIV--RKQDDRVIVQMPSKRLFSFNQLCMA 484
G +P GTIV C+E++PG G A+G T++ + + V++PS + A
Sbjct: 105 GTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRA 164
Query: 485 VVG 493
VVG
Sbjct: 165 VVG 167
>BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 46.4 bits (105), Expect = 8e-05
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 3/123 (2%)
Frame = +2
Query: 134 VIQIIEDGCRTAHVALVAVGDKLKYILATENMKAGDIIKTSCKLP-RIPVRANEGDAYVL 310
V II D R A +A V D ++ TE A + I T + + N G+ +
Sbjct: 45 VKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLPV 104
Query: 311 GALPIGTIVHCVEKEPGQGGLYIHAAGTSGTIV--RKQDDRVIVQMPSKRLFSFNQLCMA 484
G +P GTIV C+E++PG G A+G T++ + + V++PS + A
Sbjct: 105 GTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRA 164
Query: 485 VVG 493
VVG
Sbjct: 165 VVG 167
>BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 46.4 bits (105), Expect = 8e-05
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 3/123 (2%)
Frame = +2
Query: 134 VIQIIEDGCRTAHVALVAVGDKLKYILATENMKAGDIIKTSCKLP-RIPVRANEGDAYVL 310
V II D R A +A V D ++ TE A + I T + + N G+ +
Sbjct: 45 VKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLPV 104
Query: 311 GALPIGTIVHCVEKEPGQGGLYIHAAGTSGTIV--RKQDDRVIVQMPSKRLFSFNQLCMA 484
G +P GTIV C+E++PG G A+G T++ + + V++PS + A
Sbjct: 105 GTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRA 164
Query: 485 VVG 493
VVG
Sbjct: 165 VVG 167
>Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 46.0 bits (104), Expect = 1e-04
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 3/123 (2%)
Frame = +2
Query: 134 VIQIIEDGCRTAHVALVAVGDKLKYILATENMKAGDIIKTSCKLP-RIPVRANEGDAYVL 310
V II D R A +A V D ++ TE A + I T + + N G+ +
Sbjct: 45 VKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPV 104
Query: 311 GALPIGTIVHCVEKEPGQGGLYIHAAGTSGTIV--RKQDDRVIVQMPSKRLFSFNQLCMA 484
G +P GTIV C+E++PG G A+G T++ + + V++PS + A
Sbjct: 105 GTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRA 164
Query: 485 VVG 493
VVG
Sbjct: 165 VVG 167
>CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein.
Length = 257
Score = 46.0 bits (104), Expect = 1e-04
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 3/123 (2%)
Frame = +2
Query: 134 VIQIIEDGCRTAHVALVAVGDKLKYILATENMKAGDIIKTSCKLP-RIPVRANEGDAYVL 310
V II D R A +A V D ++ TE A + I T + + N G+ +
Sbjct: 45 VKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPV 104
Query: 311 GALPIGTIVHCVEKEPGQGGLYIHAAGTSGTIV--RKQDDRVIVQMPSKRLFSFNQLCMA 484
G +P GTIV C+E++PG G A+G T++ + + V++PS + A
Sbjct: 105 GTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRA 164
Query: 485 VVG 493
VVG
Sbjct: 165 VVG 167
>BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 46.0 bits (104), Expect = 1e-04
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 3/123 (2%)
Frame = +2
Query: 134 VIQIIEDGCRTAHVALVAVGDKLKYILATENMKAGDIIKTSCKLP-RIPVRANEGDAYVL 310
V II D R A +A V D ++ TE A + I T + + N G+ +
Sbjct: 45 VKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPV 104
Query: 311 GALPIGTIVHCVEKEPGQGGLYIHAAGTSGTIV--RKQDDRVIVQMPSKRLFSFNQLCMA 484
G +P GTIV C+E++PG G A+G T++ + + V++PS + A
Sbjct: 105 GTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRA 164
Query: 485 VVG 493
VVG
Sbjct: 165 VVG 167
>BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 46.0 bits (104), Expect = 1e-04
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 3/123 (2%)
Frame = +2
Query: 134 VIQIIEDGCRTAHVALVAVGDKLKYILATENMKAGDIIKTSCKLP-RIPVRANEGDAYVL 310
V II D R A +A V D ++ TE A + I T + + N G+ +
Sbjct: 45 VKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPV 104
Query: 311 GALPIGTIVHCVEKEPGQGGLYIHAAGTSGTIV--RKQDDRVIVQMPSKRLFSFNQLCMA 484
G +P GTIV C+E++PG G A+G T++ + + V++PS + A
Sbjct: 105 GTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRA 164
Query: 485 VVG 493
VVG
Sbjct: 165 VVG 167
>AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 46.0 bits (104), Expect = 1e-04
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 3/123 (2%)
Frame = +2
Query: 134 VIQIIEDGCRTAHVALVAVGDKLKYILATENMKAGDIIKTSCKLP-RIPVRANEGDAYVL 310
V II D R A +A V D ++ TE A + I T + + N G+ +
Sbjct: 45 VKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPV 104
Query: 311 GALPIGTIVHCVEKEPGQGGLYIHAAGTSGTIV--RKQDDRVIVQMPSKRLFSFNQLCMA 484
G +P GTIV C+E++PG G A+G T++ + + V++PS + A
Sbjct: 105 GTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRA 164
Query: 485 VVG 493
VVG
Sbjct: 165 VVG 167
>BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein.
Length = 211
Score = 45.6 bits (103), Expect = 1e-04
Identities = 36/120 (30%), Positives = 56/120 (46%), Gaps = 3/120 (2%)
Frame = +2
Query: 143 IIEDGCRTAHVALVAVGDKLKYILATENMKAGDIIKTSCKLP-RIPVRANEGDAYVLGAL 319
II D R A +A V D ++ TE A + I T + + N G+ +G +
Sbjct: 2 IIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTM 61
Query: 320 PIGTIVHCVEKEPGQGGLYIHAAGTSGTIV--RKQDDRVIVQMPSKRLFSFNQLCMAVVG 493
P GTIV C+E++PG G A+G T++ + + V++PS + AVVG
Sbjct: 62 PEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVG 121
>AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8
protein.
Length = 130
Score = 39.5 bits (88), Expect = 0.009
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Frame = +2
Query: 134 VIQIIEDGCRTAHVALVAVGDKLKYILATENMKAGDIIKTSCKLP-RIPVRANEGDAYVL 310
V II D R A +A V D ++ TE A + I T + + N G+ +
Sbjct: 41 VKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPV 100
Query: 311 GALPIGTIVHCVEKEPGQGGLYIHAAG 391
G +P GTIV C+E++PG G A+G
Sbjct: 101 GTMPEGTIVCCLEEKPGDRGKLARASG 127
>BC035314-1|AAH35314.1| 306|Homo sapiens brix domain containing 1
protein.
Length = 306
Score = 33.1 bits (72), Expect = 0.79
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 149 EDGCRTAHVALVAVGDKLKYILATENMKAGDIIKTSCKLPR 271
+ GCRT + L +G L +L ++ + D+ K S K+P+
Sbjct: 204 KSGCRTPRIELEEMGPSLDLVLRRTHLASDDLYKLSMKMPK 244
>AL357515-8|CAH73396.1| 208|Homo sapiens brix domain containing 1
protein.
Length = 208
Score = 33.1 bits (72), Expect = 0.79
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 149 EDGCRTAHVALVAVGDKLKYILATENMKAGDIIKTSCKLPR 271
+ GCRT + L +G L +L ++ + D+ K S K+P+
Sbjct: 165 KSGCRTPRIELEEMGPSLDLVLRRTHLASDDLYKLSMKMPK 205
>AL357515-7|CAH73395.1| 214|Homo sapiens brix domain containing 1
protein.
Length = 214
Score = 33.1 bits (72), Expect = 0.79
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 149 EDGCRTAHVALVAVGDKLKYILATENMKAGDIIKTSCKLPR 271
+ GCRT + L +G L +L ++ + D+ K S K+P+
Sbjct: 171 KSGCRTPRIELEEMGPSLDLVLRRTHLASDDLYKLSMKMPK 211
>AL357515-6|CAH73394.1| 306|Homo sapiens brix domain containing 1
protein.
Length = 306
Score = 33.1 bits (72), Expect = 0.79
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 149 EDGCRTAHVALVAVGDKLKYILATENMKAGDIIKTSCKLPR 271
+ GCRT + L +G L +L ++ + D+ K S K+P+
Sbjct: 204 KSGCRTPRIELEEMGPSLDLVLRRTHLASDDLYKLSMKMPK 244
>AK024740-1|BAB14983.1| 253|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21087 fis, clone CAS03323. ).
Length = 253
Score = 33.1 bits (72), Expect = 0.79
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 149 EDGCRTAHVALVAVGDKLKYILATENMKAGDIIKTSCKLPR 271
+ GCRT + L +G L +L ++ + D+ K S K+P+
Sbjct: 204 KSGCRTPRIELEEMGPSLDLVLRRTHLASDDLYKLSMKMPK 244
>AB209096-1|BAD92333.1| 580|Homo sapiens G protein-coupled receptor
61 variant protein.
Length = 580
Score = 30.7 bits (66), Expect = 4.2
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +2
Query: 371 LYIHAAGTSGTIVRKQDDRVIVQMPSKRLFSFNQLCMAVVGRLSNVLHGSTPIGSPQRNR 550
L + A + T +K D+ +I+Q+P L + L + + GS +GSP + R
Sbjct: 50 LAVTKADPAATSGQKGDELLILQLPGLALCTQTNLPKRLQWEVPPTKPGSLGLGSPSQGR 109
Query: 551 W--LGNRP 568
W +G+ P
Sbjct: 110 WTRMGDGP 117
>AK130499-1|BAC85365.1| 220|Homo sapiens protein ( Homo sapiens
cDNA FLJ26989 fis, clone SLV03395. ).
Length = 220
Score = 29.9 bits (64), Expect = 7.4
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = +1
Query: 334 SALRRERTWSRRSIHTRGRHVWD---HREETRRQSYCSDAFQKTI*FQSALYGRCWSSVQ 504
++ R +RT S S+H R HV H + + S Q+T+ SA R + Q
Sbjct: 19 TSARAQRTVSTHSVHARSAHVSTCSAHSTHSAHGHHTSACAQRTVSTHSAHGQRTSARAQ 78
Query: 505 RS-SRQHT 525
R+ S QHT
Sbjct: 79 RTVSTQHT 86
>AJ271869-1|CAB76561.1| 328|Homo sapiens 19A24 protein protein.
Length = 328
Score = 29.5 bits (63), Expect = 9.8
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -2
Query: 576 PERGRFPSHLFRCGDPIGVLP*RTLDRRPTTAIQS*LKLNSLL 448
P++ P+H RC G LP R L R+ T++ LK ++L
Sbjct: 275 PKKMENPTHCSRCQTHQGYLPMRMLSRQQCTSLSLLLKKKTIL 317
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,956,252
Number of Sequences: 237096
Number of extensions: 1993914
Number of successful extensions: 5203
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 5041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5193
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6522878360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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