Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21g11
         (613 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113486-1|AAM29491.1|  294|Drosophila melanogaster RE45450p pro...   268   5e-72
AE014296-1910|AAF50091.1|  294|Drosophila melanogaster CG7636-PA...   268   5e-72
BT021941-1|AAX51646.1|  362|Drosophila melanogaster RE18811p pro...    28   8.6  
AY113457-1|AAM29462.1|  825|Drosophila melanogaster RE36839p pro...    28   8.6  
AE014298-1940|AAF48302.1|  362|Drosophila melanogaster CG12177-P...    28   8.6  

>AY113486-1|AAM29491.1|  294|Drosophila melanogaster RE45450p
           protein.
          Length = 294

 Score =  268 bits (656), Expect = 5e-72
 Identities = 126/194 (64%), Positives = 150/194 (77%)
 Frame = +2

Query: 32  RVVAXXXXXXXXHKYHWIDWYRVGPTEGPPQEEKVIQIIEDGCRTAHVALVAVGDKLKYI 211
           R+VA         +Y W+ W R GPTEG  QEE V++++ DGCRTA VALVAVGD+LKYI
Sbjct: 75  RLVAKGIGGGIKQQYRWVKWVRDGPTEGA-QEELVLEVLRDGCRTAKVALVAVGDELKYI 133

Query: 212 LATENMKAGDIIKTSCKLPRIPVRANEGDAYVLGALPIGTIVHCVEKEPGQGGLYIHAAG 391
           LATENMKAGDI+KTS  +PRIPVR NEGDAY LGALP+GT +HC+EK PGQ    IHAAG
Sbjct: 134 LATENMKAGDILKTSRFIPRIPVRPNEGDAYPLGALPVGTRIHCLEKNPGQMCHLIHAAG 193

Query: 392 TSGTIVRKQDDRVIVQMPSKRLFSFNQLCMAVVGRLSNVLHGSTPIGSPQRNRWLGNRPR 571
           T GTI+RK D++V+VQ+PSKR F+F + CMA VGRLSN  H    +GS QR R +GNRPR
Sbjct: 194 TFGTILRKFDEKVVVQLPSKREFAFQRTCMATVGRLSNPEHNKEHVGSAQRMREMGNRPR 253

Query: 572 SGLWQRKSGRHGRK 613
           SGLW+RK G+HGRK
Sbjct: 254 SGLWKRKEGKHGRK 267


>AE014296-1910|AAF50091.1|  294|Drosophila melanogaster CG7636-PA
           protein.
          Length = 294

 Score =  268 bits (656), Expect = 5e-72
 Identities = 126/194 (64%), Positives = 150/194 (77%)
 Frame = +2

Query: 32  RVVAXXXXXXXXHKYHWIDWYRVGPTEGPPQEEKVIQIIEDGCRTAHVALVAVGDKLKYI 211
           R+VA         +Y W+ W R GPTEG  QEE V++++ DGCRTA VALVAVGD+LKYI
Sbjct: 75  RLVAKGIGGGIKQQYRWVKWVRDGPTEGA-QEELVLEVLRDGCRTAKVALVAVGDELKYI 133

Query: 212 LATENMKAGDIIKTSCKLPRIPVRANEGDAYVLGALPIGTIVHCVEKEPGQGGLYIHAAG 391
           LATENMKAGDI+KTS  +PRIPVR NEGDAY LGALP+GT +HC+EK PGQ    IHAAG
Sbjct: 134 LATENMKAGDILKTSRFIPRIPVRPNEGDAYPLGALPVGTRIHCLEKNPGQMCHLIHAAG 193

Query: 392 TSGTIVRKQDDRVIVQMPSKRLFSFNQLCMAVVGRLSNVLHGSTPIGSPQRNRWLGNRPR 571
           T GTI+RK D++V+VQ+PSKR F+F + CMA VGRLSN  H    +GS QR R +GNRPR
Sbjct: 194 TFGTILRKFDEKVVVQLPSKREFAFQRTCMATVGRLSNPEHNKEHVGSAQRMREMGNRPR 253

Query: 572 SGLWQRKSGRHGRK 613
           SGLW+RK G+HGRK
Sbjct: 254 SGLWKRKEGKHGRK 267


>BT021941-1|AAX51646.1|  362|Drosophila melanogaster RE18811p
           protein.
          Length = 362

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
 Frame = +1

Query: 331 DSALRRERTWSR----RSIHTRGRHVWDHREETRR 423
           D  +RR  TW      R  HTRG+ V DH  E  +
Sbjct: 292 DHLIRRHNTWHATVDLRGTHTRGQMVLDHLREREK 326


>AY113457-1|AAM29462.1|  825|Drosophila melanogaster RE36839p
           protein.
          Length = 825

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +2

Query: 269 RIPVRANEGDAYVLGALPIGTIVHCVEKEPG 361
           +I  R N  D Y+ G L +G   H +EK+ G
Sbjct: 709 KITARYNVEDLYINGTLDLGQFFHRLEKQAG 739


>AE014298-1940|AAF48302.1|  362|Drosophila melanogaster CG12177-PA
           protein.
          Length = 362

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
 Frame = +1

Query: 331 DSALRRERTWSR----RSIHTRGRHVWDHREETRR 423
           D  +RR  TW      R  HTRG+ V DH  E  +
Sbjct: 292 DHLIRRHNTWHATVDLRGTHTRGQMVLDHLREREK 326


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,205,273
Number of Sequences: 53049
Number of extensions: 606350
Number of successful extensions: 1980
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1978
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2497240350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)