Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte21g07
(571 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41556-9|AAK39192.1| 692|Caenorhabditis elegans Potassium chann... 34 0.083
U41556-8|AAM51518.1| 740|Caenorhabditis elegans Potassium chann... 34 0.083
AY572974-1|AAT77227.1| 692|Caenorhabditis elegans KQT-1 potassi... 34 0.083
Z83228-3|CAB60998.1| 536|Caenorhabditis elegans Hypothetical pr... 29 2.4
AF145377-1|AAD39816.1| 536|Caenorhabditis elegans MOM-4 protein. 29 2.4
AF143242-1|AAD37359.1| 536|Caenorhabditis elegans protein kinas... 29 2.4
U28944-12|AAA68371.2| 363|Caenorhabditis elegans Hypothetical p... 29 3.1
AF162674-1|AAF80462.1| 575|Caenorhabditis elegans CNT-like nucl... 28 5.4
AF016413-4|AAM29683.1| 454|Caenorhabditis elegans Hypothetical ... 28 5.4
AF016413-3|AAB65256.3| 555|Caenorhabditis elegans Hypothetical ... 28 5.4
Z69384-8|CAM06585.1| 495|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z69384-7|CAA93417.2| 502|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z54236-7|CAA90982.1| 1471|Caenorhabditis elegans Hypothetical pr... 27 7.2
U80840-12|AAB37925.1| 694|Caenorhabditis elegans Hypothetical p... 27 7.2
U28991-10|AAK68306.2| 487|Caenorhabditis elegans Hypothetical p... 27 7.2
U28991-9|AAU05576.1| 484|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z30317-5|CAA82971.4| 1890|Caenorhabditis elegans Hypothetical pr... 27 9.5
AF162673-1|AAF80461.1| 568|Caenorhabditis elegans CNT-like nucl... 27 9.5
AF016413-5|AAB65255.1| 568|Caenorhabditis elegans Hypothetical ... 27 9.5
>U41556-9|AAK39192.1| 692|Caenorhabditis elegans Potassium channel,
kvqlt familyprotein 1, isoform a protein.
Length = 692
Score = 33.9 bits (74), Expect = 0.083
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +3
Query: 243 MTFKN-ATPKIVQRVWNDMHEYLDDQPNWNAATLHLSM 353
+T+KN T + +R+ N MH +L+ W AAT HL++
Sbjct: 71 LTYKNYRTDQRFRRMQNKMHNFLERPRGWKAATYHLAV 108
>U41556-8|AAM51518.1| 740|Caenorhabditis elegans Potassium channel,
kvqlt familyprotein 1, isoform b protein.
Length = 740
Score = 33.9 bits (74), Expect = 0.083
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +3
Query: 243 MTFKN-ATPKIVQRVWNDMHEYLDDQPNWNAATLHLSM 353
+T+KN T + +R+ N MH +L+ W AAT HL++
Sbjct: 119 LTYKNYRTDQRFRRMQNKMHNFLERPRGWKAATYHLAV 156
>AY572974-1|AAT77227.1| 692|Caenorhabditis elegans KQT-1 potassium
channel protein.
Length = 692
Score = 33.9 bits (74), Expect = 0.083
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +3
Query: 243 MTFKN-ATPKIVQRVWNDMHEYLDDQPNWNAATLHLSM 353
+T+KN T + +R+ N MH +L+ W AAT HL++
Sbjct: 71 LTYKNYRTDQRFRRMQNKMHNFLERPRGWKAATYHLAV 108
>Z83228-3|CAB60998.1| 536|Caenorhabditis elegans Hypothetical
protein F52F12.3 protein.
Length = 536
Score = 29.1 bits (62), Expect = 2.4
Identities = 19/67 (28%), Positives = 32/67 (47%)
Frame = -2
Query: 330 HSSSAGHQDTRACRSILSERF*ASHF*TSCPYTFFRTSCSTCNRSSMASLSLHRFRNTDL 151
HS+S H+D + +LS+R+ +T S T NR + +++ FR
Sbjct: 168 HSNSQVHRDLKLQNMLLSDRYRTMKLCDFGTFTSMHQS-MTSNRGTPITMAPEVFRCEQY 226
Query: 150 PVKSDIF 130
+KSDI+
Sbjct: 227 NMKSDIY 233
>AF145377-1|AAD39816.1| 536|Caenorhabditis elegans MOM-4 protein.
Length = 536
Score = 29.1 bits (62), Expect = 2.4
Identities = 19/67 (28%), Positives = 32/67 (47%)
Frame = -2
Query: 330 HSSSAGHQDTRACRSILSERF*ASHF*TSCPYTFFRTSCSTCNRSSMASLSLHRFRNTDL 151
HS+S H+D + +LS+R+ +T S T NR + +++ FR
Sbjct: 168 HSNSQVHRDLKLQNMLLSDRYRTMKLCDFGTFTSMHQS-MTSNRGTPITMAPEVFRCEQY 226
Query: 150 PVKSDIF 130
+KSDI+
Sbjct: 227 NMKSDIY 233
>AF143242-1|AAD37359.1| 536|Caenorhabditis elegans protein kinase
MOM-4 protein.
Length = 536
Score = 29.1 bits (62), Expect = 2.4
Identities = 19/67 (28%), Positives = 32/67 (47%)
Frame = -2
Query: 330 HSSSAGHQDTRACRSILSERF*ASHF*TSCPYTFFRTSCSTCNRSSMASLSLHRFRNTDL 151
HS+S H+D + +LS+R+ +T S T NR + +++ FR
Sbjct: 168 HSNSQVHRDLKLQNMLLSDRYRTMKLCDFGTFTSMHQS-MTSNRGTPITMAPEVFRCEQY 226
Query: 150 PVKSDIF 130
+KSDI+
Sbjct: 227 NMKSDIY 233
>U28944-12|AAA68371.2| 363|Caenorhabditis elegans Hypothetical
protein C18A3.2 protein.
Length = 363
Score = 28.7 bits (61), Expect = 3.1
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -2
Query: 249 TSCPYTFFRTSCSTCNRSSMASL 181
TS PYTF RT C +++S++ L
Sbjct: 22 TSIPYTFLRTCCVNASKTSISFL 44
>AF162674-1|AAF80462.1| 575|Caenorhabditis elegans CNT-like
nucleoside transporter protein.
Length = 575
Score = 27.9 bits (59), Expect = 5.4
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -1
Query: 199 ILHGFPITSSISKYGSSCKV*HILLFFW 116
+ HGF + + I Y + + ++ LFFW
Sbjct: 58 VYHGFLVAAGIHNYQKAAPLIYVTLFFW 85
>AF016413-4|AAM29683.1| 454|Caenorhabditis elegans Hypothetical
protein F27E11.2b protein.
Length = 454
Score = 27.9 bits (59), Expect = 5.4
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -1
Query: 199 ILHGFPITSSISKYGSSCKV*HILLFFW 116
+ HGF + + I Y + + ++ LFFW
Sbjct: 58 VYHGFLVAAGIHNYQKAAPLIYVTLFFW 85
>AF016413-3|AAB65256.3| 555|Caenorhabditis elegans Hypothetical
protein F27E11.2a protein.
Length = 555
Score = 27.9 bits (59), Expect = 5.4
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -1
Query: 199 ILHGFPITSSISKYGSSCKV*HILLFFW 116
+ HGF + + I Y + + ++ LFFW
Sbjct: 58 VYHGFLVAAGIHNYQKAAPLIYVTLFFW 85
>Z69384-8|CAM06585.1| 495|Caenorhabditis elegans Hypothetical
protein T11G6.2b protein.
Length = 495
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -1
Query: 124 FFWKLSGFILGIDWPPTTSI 65
F W L+GFI + WP SI
Sbjct: 144 FLWILNGFIQSVGWPVEVSI 163
>Z69384-7|CAA93417.2| 502|Caenorhabditis elegans Hypothetical
protein T11G6.2a protein.
Length = 502
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -1
Query: 124 FFWKLSGFILGIDWPPTTSI 65
F W L+GFI + WP SI
Sbjct: 151 FLWILNGFIQSVGWPVEVSI 170
>Z54236-7|CAA90982.1| 1471|Caenorhabditis elegans Hypothetical protein
C27B7.7 protein.
Length = 1471
Score = 27.5 bits (58), Expect = 7.2
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = -1
Query: 199 ILHGFPITSSISKYGSSCKV*HILLFFWKLSGFILGIDWPPTTSIN-KTIANK*PTVLIS 23
+ H + S + + ++ H L + K+SG LG + PP+ I+ + I++ PT +IS
Sbjct: 1400 VKHEIDVESGKTTFEFPFQLDHTLSYTIKMSGMKLGRESPPSEEIDLEFISSPSPTPIIS 1459
>U80840-12|AAB37925.1| 694|Caenorhabditis elegans Hypothetical
protein F08D12.1 protein.
Length = 694
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 246 TFKNATPKIVQRVWNDMHEYLDDQPNWNAATLHL 347
T KN TP+ ++ + D+ E + N AAT HL
Sbjct: 478 TAKNQTPEALKSILEDLVEVEQQRGNETAATKHL 511
>U28991-10|AAK68306.2| 487|Caenorhabditis elegans Hypothetical
protein F08F8.10a protein.
Length = 487
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 265 LKSFREYGTTCTSILMTSRTGMPPP 339
L SF +G T S +T+ G+PPP
Sbjct: 209 LSSFNPFGQTSPSSALTTAFGIPPP 233
>U28991-9|AAU05576.1| 484|Caenorhabditis elegans Hypothetical
protein F08F8.10b protein.
Length = 484
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 265 LKSFREYGTTCTSILMTSRTGMPPP 339
L SF +G T S +T+ G+PPP
Sbjct: 206 LSSFNPFGQTSPSSALTTAFGIPPP 230
>Z30317-5|CAA82971.4| 1890|Caenorhabditis elegans Hypothetical
protein T16G12.1 protein.
Length = 1890
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/36 (27%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 114 FQKNNRIC-QTLQEDPYFEIDEVIGKPWRIYYTWNM 218
+ N +I T ++P+ +I ++ PW YTW++
Sbjct: 553 YNNNQKIGGSTFSQEPFLDISDLTATPWN--YTWSI 586
>AF162673-1|AAF80461.1| 568|Caenorhabditis elegans CNT-like
nucleoside transporter protein.
Length = 568
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = -1
Query: 199 ILHGFPITSSISKYGSSCKV*HILLFFWK--LSGFILG 92
+ HG+ I + I Y + + ++ LFFW + FI+G
Sbjct: 52 VYHGYLIAAGIHNYQKASPLIYVTLFFWLCFVINFIVG 89
>AF016413-5|AAB65255.1| 568|Caenorhabditis elegans Hypothetical
protein F27E11.1 protein.
Length = 568
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = -1
Query: 199 ILHGFPITSSISKYGSSCKV*HILLFFWK--LSGFILG 92
+ HG+ I + I Y + + ++ LFFW + FI+G
Sbjct: 52 VYHGYLIAAGIHNYQKASPLIYVTLFFWLCFVINFIVG 89
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,713,119
Number of Sequences: 27780
Number of extensions: 336565
Number of successful extensions: 904
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 904
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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