Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21f16
         (359 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    25   0.21 
DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    23   1.1  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   3.3  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    21   4.4  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    21   5.9  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    21   5.9  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   5.9  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    20   7.7  

>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 25.4 bits (53), Expect = 0.21
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 8/53 (15%)
 Frame = -1

Query: 290 CSHARENHSYCDC---DNRLVDNFHDL*N---NCLLSSEDYY--QN*KRFSPY 156
           C   R + S C C    N ++ NF++  N   +CL S+E YY   N ++F+ Y
Sbjct: 346 CRSRRHSDSCCLCLDSMNAVIRNFNESENRRNSCLGSTETYYSKHNTQQFTQY 398


>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 176 NSDNNPQNLANSYSTNHGSCQ 238
           N +NN  N  N+Y+TN+   Q
Sbjct: 93  NYNNNYNNYNNNYNTNYKKLQ 113


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = -1

Query: 302 SMD*CSHARENHSYCDCDNRLVDNFHDL*NNCLLSSEDYYQ 180
           SMD  + A   +S+   D+    N +   ++CLL   D YQ
Sbjct: 80  SMDSQNSASTYNSFLSSDSASSGNVYCKCDDCLLGIVDDYQ 120


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +2

Query: 173 SNSDNNPQNLANSYSTNHGSCQQ 241
           S S N+P+N   + + NH +  Q
Sbjct: 105 STSSNDPKNQYKNQNNNHYTSHQ 127


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +2

Query: 170 FSNSDNNPQNLANSYSTNHGS 232
           +SN +N   N  N+Y+ N+ +
Sbjct: 91  YSNYNNYNNNYNNNYNNNYNN 111


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +2

Query: 170 FSNSDNNPQNLANSYSTNHGS 232
           +SN +N   N  N+Y+ N+ +
Sbjct: 91  YSNYNNYNNNYNNNYNNNYNN 111


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +2

Query: 161 GKIFSNSDNNPQNLANSYSTNHGS 232
           G   +N+ NN  N  N+ + N+G+
Sbjct: 231 GNANTNASNNNNNNNNNNNNNNGA 254


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 20.2 bits (40), Expect = 7.7
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +2

Query: 182 DNNPQNLANSYSTNH 226
           +N+P+ LANS +  H
Sbjct: 25  ENSPRKLANSMNVIH 39


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,542
Number of Sequences: 438
Number of extensions: 1188
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8432340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)